RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 PRAC1Q96KF2 57 aa3.61□□□□□ -1.83
NR1I3-216ENST00000502848 KRTAP10-7P60409 375 aaPredicted RBP3.56□□□□□ -1.84
NR1I3-216ENST00000502848 FCGBPQ9Y6R7 5405 aaPredicted RBP3.53□□□□□ -1.84
NR1I3-216ENST00000502848 KRTAP8-1Q8IUC2 63 aa3.53□□□□□ -1.84
NR1I3-216ENST00000502848 CRCT1Q9UGL9 99 aa3.53□□□□□ -1.84
NR1I3-216ENST00000502848 LCE3AQ5TA76 89 aa3.51□□□□□ -1.85
NR1I3-216ENST00000502848 FSIP2Q5CZC0 6907 aa3.5□□□□□ -1.85
NR1I3-216ENST00000502848 KRTAP12-3P60328 96 aa3.42□□□□□ -1.86
NR1I3-216ENST00000502848 MT3P25713 68 aa3.39□□□□□ -1.87
NR1I3-216ENST00000502848 KRTAP2-2Q9BYT5 123 aa3.39□□□□□ -1.87
NR1I3-216ENST00000502848 KRTAP19-5Q3LI72 72 aa3.36□□□□□ -1.87
NR1I3-216ENST00000502848 KRTAP19-7Q3SYF9 63 aa3.36□□□□□ -1.87
NR1I3-216ENST00000502848 KMT2DO14686 5537 aa3.34□□□□□ -1.87
NR1I3-216ENST00000502848 MACF1Q9UPN3 7388 aaKnown RBP3.34□□□□□ -1.88
NR1I3-216ENST00000502848 MT1EP04732 61 aa3.31□□□□□ -1.88
NR1I3-216ENST00000502848 KRTAP5-9P26371 169 aa3.3□□□□□ -1.88
NR1I3-216ENST00000502848 KRTAP6-3Q3LI67 103 aa3.25□□□□□ -1.89
NR1I3-216ENST00000502848 MT1LQ93083 61 aa3.24□□□□□ -1.89
NR1I3-216ENST00000502848 SPRR2FQ96RM1 72 aa3.23□□□□□ -1.89
NR1I3-216ENST00000502848 SPRR5A0A1B0GTR4 108 aa3.22□□□□□ -1.89
NR1I3-216ENST00000502848 MT1GP13640 62 aa3.2□□□□□ -1.9
NR1I3-216ENST00000502848 KRTAP19-3Q7Z4W3 81 aa3.2□□□□□ -1.9
NR1I3-216ENST00000502848 LCE3CQ5T5A8 94 aa3.19□□□□□ -1.9
NR1I3-216ENST00000502848 SYNE2Q8WXH0 6885 aaKnown RBP3.17□□□□□ -1.9
NR1I3-216ENST00000502848 LUZP6Q538Z0 58 aa3.15□□□□□ -1.91
NR1I3-216ENST00000502848 MUC12Q9UKN1 5478 aa3.14□□□□□ -1.91
NR1I3-216ENST00000502848 MDN1Q9NU22 5596 aa3.13□□□□□ -1.91
NR1I3-216ENST00000502848 MT1MQ8N339 61 aa3.11□□□□□ -1.91
NR1I3-216ENST00000502848 NDUFAF8A1L188 74 aa3.09□□□□□ -1.91
NR1I3-216ENST00000502848 SPRR2EP22531 72 aa3.09□□□□□ -1.91
NR1I3-216ENST00000502848 SPRR2BP35325 72 aa3.09□□□□□ -1.91
NR1I3-216ENST00000502848 SPRR2AP35326 72 aa3.09□□□□□ -1.91
NR1I3-216ENST00000502848 KRTAP5-11Q6L8G4 156 aa3.06□□□□□ -1.92
NR1I3-216ENST00000502848 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
NR1I3-216ENST00000502848 NEBP20929 6669 aa3□□□□□ -1.93
NR1I3-216ENST00000502848 KRTAP5-6Q6L8G9 129 aaPredicted RBP3□□□□□ -1.93
NR1I3-216ENST00000502848 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
NR1I3-216ENST00000502848 SPRR2DP22532 72 aa2.98□□□□□ -1.93
NR1I3-216ENST00000502848 KRTAP9-6A8MVA2 160 aa2.96□□□□□ -1.94
NR1I3-216ENST00000502848 KRTAP4-3Q9BYR4 195 aa2.94□□□□□ -1.94
NR1I3-216ENST00000502848 DSTQ03001 7570 aaKnown RBP2.86□□□□□ -1.95
NR1I3-216ENST00000502848 KRTAP5-5Q701N2 237 aaPredicted RBP2.84□□□□□ -1.95
NR1I3-216ENST00000502848 KRTAP2-3P0C7H8 128 aa2.83□□□□□ -1.96
NR1I3-216ENST00000502848 KRTAP20-1Q3LI63 56 aa2.83□□□□□ -1.96
NR1I3-216ENST00000502848 KRTAP2-4Q9BYR9 128 aa2.83□□□□□ -1.96
NR1I3-216ENST00000502848 KRTAP2-1Q9BYU5 128 aa2.79□□□□□ -1.96
NR1I3-216ENST00000502848 MT1AP04731 61 aa2.78□□□□□ -1.96
NR1I3-216ENST00000502848 KRTAP5-4Q6L8H1 288 aa2.75□□□□□ -1.97
NR1I3-216ENST00000502848 KRTAP6-1Q3LI64 71 aa2.69□□□□□ -1.98
NR1I3-216ENST00000502848 KRTAP12-4P60329 112 aa2.66□□□□□ -1.98
NR1I3-216ENST00000502848 INE1O15225 51 aa2.64□□□□□ -1.99
NR1I3-216ENST00000502848 KRTAP5-1Q6L8H4 278 aa2.61□□□□□ -1.99
NR1I3-216ENST00000502848 LCE3EQ5T5B0 92 aa2.58□□□□□ -2
NR1I3-216ENST00000502848 HMCN1Q96RW7 5635 aa2.54□□□□□ -2
NR1I3-216ENST00000502848 SYNE1Q8NF91 8797 aaKnown RBP2.53□□□□□ -2
NR1I3-216ENST00000502848 KRTAP20-2Q3LI61 65 aa2.53□□□□□ -2
NR1I3-216ENST00000502848 MT4P47944 62 aa2.52□□□□□ -2.01
NR1I3-216ENST00000502848 KRTAP5-2Q701N4 177 aa2.5□□□□□ -2.01
NR1I3-216ENST00000502848 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
NR1I3-216ENST00000502848 KRTAP6-2Q3LI66 62 aa2.48□□□□□ -2.01
NR1I3-216ENST00000502848 LCE3DQ9BYE3 92 aa2.4□□□□□ -2.03
NR1I3-216ENST00000502848 GPR98Q8WXG9 6306 aa2.38□□□□□ -2.03
NR1I3-216ENST00000502848 OBSCNQ5VST9 7968 aa2.34□□□□□ -2.04
NR1I3-216ENST00000502848 AHNAK2Q8IVF2 5795 aa2.3□□□□□ -2.04
NR1I3-216ENST00000502848 KRTAP5-10Q6L8G5 202 aa2.17□□□□□ -2.06
NR1I3-216ENST00000502848 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
NR1I3-216ENST00000502848 KRTAP5-7Q6L8G8 165 aa2.12□□□□□ -2.07
NR1I3-216ENST00000502848 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
NR1I3-216ENST00000502848 LCE1BQ5T7P3 118 aa2.08□□□□□ -2.08
NR1I3-216ENST00000502848 MUC5ACP98088 5654 aa2.07□□□□□ -2.08
NR1I3-216ENST00000502848 PRM1P04553 51 aa1.96□□□□□ -2.1
NR1I3-216ENST00000502848 MUC5BQ9HC84 5762 aaPredicted RBP1.89□□□□□ -2.11
NR1I3-216ENST00000502848 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
NR1I3-216ENST00000502848 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
NR1I3-216ENST00000502848 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
NR1I3-216ENST00000502848 PHGR1C9JFL3 82 aa1.57□□□□□ -2.16
NR1I3-216ENST00000502848 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
NR1I3-216ENST00000502848 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 130.2 ms