RNA–Protein interactions for RNA: ENST00000502706.1

RFC1-204, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-204ENST00000502706 SSBP3-AS1Q7Z2R9 100 aa2.56□□□□□ -2
RFC1-204ENST00000502706 DEFB105AQ8NG35 78 aa2.56□□□□□ -2
RFC1-204ENST00000502706 UQCR11O14957 56 aa2.55□□□□□ -2
RFC1-204ENST00000502706 SPRR1AP35321 89 aa2.55□□□□□ -2
RFC1-204ENST00000502706 TP53AIP1Q9HCN2 124 aa2.55□□□□□ -2
RFC1-204ENST00000502706 A0A1B0GU69 56 aa2.54□□□□□ -2
RFC1-204ENST00000502706 COX6B2Q6YFQ2 88 aa2.54□□□□□ -2
RFC1-204ENST00000502706 MUC12Q9UKN1 5478 aa2.53□□□□□ -2
RFC1-204ENST00000502706 C9orf92A6NGG3 77 aa2.53□□□□□ -2
RFC1-204ENST00000502706 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
RFC1-204ENST00000502706 ACYP2P14621 99 aa2.52□□□□□ -2.01
RFC1-204ENST00000502706 KRTAP6-3Q3LI67 103 aa2.52□□□□□ -2.01
RFC1-204ENST00000502706 Q6ZRX8 168 aa2.52□□□□□ -2.01
RFC1-204ENST00000502706 NEBP20929 6669 aa2.52□□□□□ -2.01
RFC1-204ENST00000502706 FLGP20930 4061 aaPredicted RBP2.52□□□□□ -2.01
RFC1-204ENST00000502706 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
RFC1-204ENST00000502706 MMP24-AS1A0A0U1RRL7 71 aa2.49□□□□□ -2.01
RFC1-204ENST00000502706 RPL37P61927 97 aaKnown RBP2.48□□□□□ -2.01
RFC1-204ENST00000502706 SPRR1BP22528 89 aa2.46□□□□□ -2.02
RFC1-204ENST00000502706 LINC00472Q9H8W2 130 aa2.46□□□□□ -2.02
RFC1-204ENST00000502706 Q96NJ1 140 aa2.45□□□□□ -2.02
RFC1-204ENST00000502706 MRPL34Q9BQ48 92 aaKnown RBP2.42□□□□□ -2.02
RFC1-204ENST00000502706 MDN1Q9NU22 5596 aa2.4□□□□□ -2.03
RFC1-204ENST00000502706 KRTAP20-1Q3LI63 56 aa2.4□□□□□ -2.03
RFC1-204ENST00000502706 KMT2DO14686 5537 aa2.38□□□□□ -2.03
RFC1-204ENST00000502706 MT2AP02795 61 aa2.38□□□□□ -2.03
RFC1-204ENST00000502706 MT1FP04733 61 aa2.36□□□□□ -2.03
RFC1-204ENST00000502706 PLAC4Q8WY50 150 aa2.36□□□□□ -2.03
RFC1-204ENST00000502706 H0YAA0 97 aa2.33□□□□□ -2.04
RFC1-204ENST00000502706 CRIPTQ9P021 101 aa2.33□□□□□ -2.04
RFC1-204ENST00000502706 KRTAP19-6Q3LI70 58 aa2.32□□□□□ -2.04
RFC1-204ENST00000502706 GPR98Q8WXG9 6306 aa2.32□□□□□ -2.04
RFC1-204ENST00000502706 H1FX-AS1Q4G0G2 97 aa2.31□□□□□ -2.04
RFC1-204ENST00000502706 KRTAP12-3P60328 96 aa2.28□□□□□ -2.04
RFC1-204ENST00000502706 KRTAP12-4P60329 112 aa2.27□□□□□ -2.05
RFC1-204ENST00000502706 KRTAP2-3P0C7H8 128 aa2.25□□□□□ -2.05
RFC1-204ENST00000502706 KRTAP2-4Q9BYR9 128 aa2.25□□□□□ -2.05
RFC1-204ENST00000502706 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
RFC1-204ENST00000502706 C10orf95Q9H7T3 257 aa2.2□□□□□ -2.06
RFC1-204ENST00000502706 KRTAP2-1Q9BYU5 128 aa2.16□□□□□ -2.06
RFC1-204ENST00000502706 S4R3F8 94 aa2.13□□□□□ -2.07
RFC1-204ENST00000502706 A0A0D9SG42 100 aa2.12□□□□□ -2.07
RFC1-204ENST00000502706 MT1BP07438 61 aa2.12□□□□□ -2.07
RFC1-204ENST00000502706 KRTAP19-8Q3LI54 63 aa2.09□□□□□ -2.07
RFC1-204ENST00000502706 SPRR2GQ9BYE4 73 aa2.09□□□□□ -2.07
RFC1-204ENST00000502706 SPRR2EP22531 72 aa2.07□□□□□ -2.08
RFC1-204ENST00000502706 SPRR2BP35325 72 aa2.07□□□□□ -2.08
RFC1-204ENST00000502706 SPRR2AP35326 72 aa2.07□□□□□ -2.08
RFC1-204ENST00000502706 SPRR2FQ96RM1 72 aa2.06□□□□□ -2.08
RFC1-204ENST00000502706 AHNAK2Q8IVF2 5795 aa2.04□□□□□ -2.08
RFC1-204ENST00000502706 KRTAP8-1Q8IUC2 63 aa2.01□□□□□ -2.09
RFC1-204ENST00000502706 DSTQ03001 7570 aaKnown RBP2.01□□□□□ -2.09
RFC1-204ENST00000502706 HMCN1Q96RW7 5635 aa2.01□□□□□ -2.09
RFC1-204ENST00000502706 SPRR2DP22532 72 aa2□□□□□ -2.09
RFC1-204ENST00000502706 M0QZ58 72 aa1.99□□□□□ -2.09
RFC1-204ENST00000502706 MT1XP80297 61 aa1.95□□□□□ -2.1
RFC1-204ENST00000502706 KRTAP5-10Q6L8G5 202 aa1.95□□□□□ -2.1
RFC1-204ENST00000502706 AHNAKQ09666 5890 aaKnown RBP1.79□□□□□ -2.12
RFC1-204ENST00000502706 TNP1P09430 55 aa1.78□□□□□ -2.12
RFC1-204ENST00000502706 MUC5BQ9HC84 5762 aaPredicted RBP1.77□□□□□ -2.13
RFC1-204ENST00000502706 MT4P47944 62 aa1.77□□□□□ -2.13
RFC1-204ENST00000502706 KRTAP19-3Q7Z4W3 81 aa1.77□□□□□ -2.13
RFC1-204ENST00000502706 MT1EP04732 61 aa1.74□□□□□ -2.13
RFC1-204ENST00000502706 KRTAP19-7Q3SYF9 63 aa1.74□□□□□ -2.13
RFC1-204ENST00000502706 MUC5ACP98088 5654 aa1.72□□□□□ -2.13
RFC1-204ENST00000502706 MT1GP13640 62 aa1.71□□□□□ -2.14
RFC1-204ENST00000502706 KRTAP19-5Q3LI72 72 aa1.67□□□□□ -2.14
RFC1-204ENST00000502706 MT1MQ8N339 61 aa1.67□□□□□ -2.14
RFC1-204ENST00000502706 MT1LQ93083 61 aa1.64□□□□□ -2.15
RFC1-204ENST00000502706 KRTAP20-2Q3LI61 65 aa1.6□□□□□ -2.15
RFC1-204ENST00000502706 SYNE1Q8NF91 8797 aaKnown RBP1.48□□□□□ -2.17
RFC1-204ENST00000502706 MT1AP04731 61 aa1.4□□□□□ -2.19
RFC1-204ENST00000502706 KRTAP6-1Q3LI64 71 aa1.39□□□□□ -2.19
RFC1-204ENST00000502706 KRTAP6-2Q3LI66 62 aa1.36□□□□□ -2.19
RFC1-204ENST00000502706 PRM1P04553 51 aa1.25□□□□□ -2.21
RFC1-204ENST00000502706 PHGR1C9JFL3 82 aa1.11□□□□□ -2.23
RFC1-204ENST00000502706 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
RFC1-204ENST00000502706 KRTAP21-1Q3LI58 79 aa0.9□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 110.6 ms