RNA–Protein interactions for RNA: ENST00000502315.1

SH3RF1-202, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 487 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-202ENST00000502315 LCE1EQ5T753 118 aa2.76□□□□□ -1.97
SH3RF1-202ENST00000502315 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
SH3RF1-202ENST00000502315 SEC61GP60059 68 aa2.73□□□□□ -1.97
SH3RF1-202ENST00000502315 DSTQ03001 7570 aaKnown RBP2.73□□□□□ -1.97
SH3RF1-202ENST00000502315 A6NED7 52 aa2.71□□□□□ -1.98
SH3RF1-202ENST00000502315 A8MU10 97 aa2.7□□□□□ -1.98
SH3RF1-202ENST00000502315 KRTAP19-3Q7Z4W3 81 aa2.7□□□□□ -1.98
SH3RF1-202ENST00000502315 A0A1B0GU33 70 aa2.69□□□□□ -1.98
SH3RF1-202ENST00000502315 BRK1Q8WUW1 75 aa2.69□□□□□ -1.98
SH3RF1-202ENST00000502315 KRTAP13-4Q3LI77 160 aa2.68□□□□□ -1.98
SH3RF1-202ENST00000502315 KRTAP19-7Q3SYF9 63 aa2.68□□□□□ -1.98
SH3RF1-202ENST00000502315 CAMK2N1Q7Z7J9 78 aa2.68□□□□□ -1.98
SH3RF1-202ENST00000502315 GPR98Q8WXG9 6306 aa2.67□□□□□ -1.98
SH3RF1-202ENST00000502315 UQCR11O14957 56 aa2.67□□□□□ -1.98
SH3RF1-202ENST00000502315 MT1EP04732 61 aa2.67□□□□□ -1.98
SH3RF1-202ENST00000502315 KRTAP5-4Q6L8H1 288 aa2.67□□□□□ -1.98
SH3RF1-202ENST00000502315 SPATA8Q6RVD6 105 aa2.67□□□□□ -1.98
SH3RF1-202ENST00000502315 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
SH3RF1-202ENST00000502315 MT1GP13640 62 aa2.66□□□□□ -1.98
SH3RF1-202ENST00000502315 MIR22HGQ0VDD5 57 aa2.66□□□□□ -1.98
SH3RF1-202ENST00000502315 PP632Q6XCG6 107 aa2.66□□□□□ -1.98
SH3RF1-202ENST00000502315 CDC42SE1Q9NRR8 79 aa2.65□□□□□ -1.99
SH3RF1-202ENST00000502315 A0A0D9SG42 100 aa2.62□□□□□ -1.99
SH3RF1-202ENST00000502315 PRO0628Q9UI54 55 aa2.61□□□□□ -1.99
SH3RF1-202ENST00000502315 KRTAP12-1P59990 96 aa2.55□□□□□ -2
SH3RF1-202ENST00000502315 KRTAP19-5Q3LI72 72 aa2.55□□□□□ -2
SH3RF1-202ENST00000502315 SPINT4Q6UDR6 99 aa2.54□□□□□ -2
SH3RF1-202ENST00000502315 MT1MQ8N339 61 aa2.54□□□□□ -2
SH3RF1-202ENST00000502315 HMCN1Q96RW7 5635 aa2.53□□□□□ -2
SH3RF1-202ENST00000502315 MT4P47944 62 aa2.52□□□□□ -2.01
SH3RF1-202ENST00000502315 PMAIP1Q13794 54 aa2.52□□□□□ -2.01
SH3RF1-202ENST00000502315 KRTAP5-10Q6L8G5 202 aa2.52□□□□□ -2.01
SH3RF1-202ENST00000502315 MT1LQ93083 61 aa2.52□□□□□ -2.01
SH3RF1-202ENST00000502315 K7ERS5 55 aa2.51□□□□□ -2.01
SH3RF1-202ENST00000502315 C10orf95Q9H7T3 257 aa2.5□□□□□ -2.01
SH3RF1-202ENST00000502315 TNP1P09430 55 aa2.48□□□□□ -2.01
SH3RF1-202ENST00000502315 KRTAP5-7Q6L8G8 165 aa2.48□□□□□ -2.01
SH3RF1-202ENST00000502315 AHNAK2Q8IVF2 5795 aa2.47□□□□□ -2.01
SH3RF1-202ENST00000502315 SPRR5A0A1B0GTR4 108 aa2.44□□□□□ -2.02
SH3RF1-202ENST00000502315 KRTAP9-6A8MVA2 160 aa2.44□□□□□ -2.02
SH3RF1-202ENST00000502315 ROMO1P60602 79 aa2.43□□□□□ -2.02
SH3RF1-202ENST00000502315 KTN1-AS1Q86SY8 53 aa2.43□□□□□ -2.02
SH3RF1-202ENST00000502315 PRAC1Q96KF2 57 aa2.43□□□□□ -2.02
SH3RF1-202ENST00000502315 LCE3AQ5TA76 89 aa2.42□□□□□ -2.02
SH3RF1-202ENST00000502315 KRTAP12-4P60329 112 aa2.39□□□□□ -2.03
SH3RF1-202ENST00000502315 KRTAP20-2Q3LI61 65 aa2.39□□□□□ -2.03
SH3RF1-202ENST00000502315 KRTAP4-3Q9BYR4 195 aa2.39□□□□□ -2.03
SH3RF1-202ENST00000502315 KRTAP12-3P60328 96 aa2.38□□□□□ -2.03
SH3RF1-202ENST00000502315 KRTAP5-5Q701N2 237 aaPredicted RBP2.38□□□□□ -2.03
SH3RF1-202ENST00000502315 SVIPQ8NHG7 77 aa2.38□□□□□ -2.03
SH3RF1-202ENST00000502315 KRTAP25-1Q3LHN0 102 aa2.33□□□□□ -2.04
SH3RF1-202ENST00000502315 OBSCNQ5VST9 7968 aa2.31□□□□□ -2.04
SH3RF1-202ENST00000502315 MT3P25713 68 aa2.27□□□□□ -2.05
SH3RF1-202ENST00000502315 KRTAP5-2Q701N4 177 aa2.27□□□□□ -2.05
SH3RF1-202ENST00000502315 SYNE1Q8NF91 8797 aaKnown RBP2.24□□□□□ -2.05
SH3RF1-202ENST00000502315 LCE3CQ5T5A8 94 aa2.18□□□□□ -2.06
SH3RF1-202ENST00000502315 MT1AP04731 61 aa2.17□□□□□ -2.06
SH3RF1-202ENST00000502315 LCE1FQ5T754 118 aa2.16□□□□□ -2.06
SH3RF1-202ENST00000502315 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
SH3RF1-202ENST00000502315 KRTAP6-1Q3LI64 71 aa2.11□□□□□ -2.07
SH3RF1-202ENST00000502315 MUC5ACP98088 5654 aa2.09□□□□□ -2.07
SH3RF1-202ENST00000502315 A0A0A0MQY5 61 aa2.06□□□□□ -2.08
SH3RF1-202ENST00000502315 AHNAKQ09666 5890 aaKnown RBP2.06□□□□□ -2.08
SH3RF1-202ENST00000502315 KRTAP6-2Q3LI66 62 aa2.05□□□□□ -2.08
SH3RF1-202ENST00000502315 MUC5BQ9HC84 5762 aaPredicted RBP2.05□□□□□ -2.08
SH3RF1-202ENST00000502315 NDUFAF8A1L188 74 aa1.9□□□□□ -2.11
SH3RF1-202ENST00000502315 LUZP6Q538Z0 58 aa1.9□□□□□ -2.11
SH3RF1-202ENST00000502315 LCE3EQ5T5B0 92 aa1.89□□□□□ -2.11
SH3RF1-202ENST00000502315 LCE1CQ5T751 118 aa1.79□□□□□ -2.12
SH3RF1-202ENST00000502315 LCE1BQ5T7P3 118 aa1.79□□□□□ -2.12
SH3RF1-202ENST00000502315 LCE3DQ9BYE3 92 aa1.56□□□□□ -2.16
SH3RF1-202ENST00000502315 INE1O15225 51 aa1.53□□□□□ -2.16
SH3RF1-202ENST00000502315 MUC19Q7Z5P9 8384 aa1.51□□□□□ -2.17
SH3RF1-202ENST00000502315 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
SH3RF1-202ENST00000502315 KRTAP21-2Q3LI59 83 aa1.42□□□□□ -2.18
SH3RF1-202ENST00000502315 PRM1P04553 51 aa1.29□□□□□ -2.2
SH3RF1-202ENST00000502315 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
SH3RF1-202ENST00000502315 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 43.6 ms