RNA–Protein interactions for RNA: ENST00000501412.2

RAP1B-213, Transcript of RAP1B, member of RAS oncogene family, human

TSL 2

Gene RAP1B, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-213	ENST00000501412	KRTAP12-3	P60328	96 aa		8.18	□□□□□ -1.1
RAP1B-213	ENST00000501412	SPRR2E	P22531	72 aa		8.14	□□□□□ -1.11
RAP1B-213	ENST00000501412	SPRR2B	P35325	72 aa		8.14	□□□□□ -1.11
RAP1B-213	ENST00000501412	SPRR2A	P35326	72 aa		8.14	□□□□□ -1.11
RAP1B-213	ENST00000501412	LOC100996750	A0A140TA64	210 aa		8.13	□□□□□ -1.11
RAP1B-213	ENST00000501412	KRTAP4-6	Q9BYQ5	205 aa		8.13	□□□□□ -1.11
RAP1B-213	ENST00000501412	KRTAP2-3	P0C7H8	128 aa		8.05	□□□□□ -1.12
RAP1B-213	ENST00000501412	KRTAP2-4	Q9BYR9	128 aa		8.05	□□□□□ -1.12
RAP1B-213	ENST00000501412	LCE1A	Q5T7P2	110 aa		8.04	□□□□□ -1.12
RAP1B-213	ENST00000501412	MT1L	Q93083	61 aa		7.96	□□□□□ -1.13
RAP1B-213	ENST00000501412	KRTAP15-1	Q3LI76	137 aa		7.93	□□□□□ -1.14
RAP1B-213	ENST00000501412	KRTAP19-3	Q7Z4W3	81 aa		7.92	□□□□□ -1.14
RAP1B-213	ENST00000501412	SPRR2D	P22532	72 aa		7.87	□□□□□ -1.15
RAP1B-213	ENST00000501412	LCE5A	Q5TCM9	118 aa		7.85	□□□□□ -1.15
RAP1B-213	ENST00000501412	MT1G	P13640	62 aa		7.81	□□□□□ -1.16
RAP1B-213	ENST00000501412	KRTAP2-2	Q9BYT5	123 aa		7.8	□□□□□ -1.16
RAP1B-213	ENST00000501412	KRTAP2-1	Q9BYU5	128 aa		7.8	□□□□□ -1.16
RAP1B-213	ENST00000501412	SVIP	Q8NHG7	77 aa		7.74	□□□□□ -1.17
RAP1B-213	ENST00000501412	KRTAP19-4	Q3LI73	84 aa		7.72	□□□□□ -1.17
RAP1B-213	ENST00000501412	MT1M	Q8N339	61 aa		7.72	□□□□□ -1.17
RAP1B-213	ENST00000501412	LCE3B	Q5TA77	95 aa		7.67	□□□□□ -1.18
RAP1B-213	ENST00000501412		H3BS24	57 aa		7.66	□□□□□ -1.18
RAP1B-213	ENST00000501412	KRTAP4-7	Q9BYR0	210 aa		7.64	□□□□□ -1.19
RAP1B-213	ENST00000501412	LCE3C	Q5T5A8	94 aa		7.62	□□□□□ -1.19
RAP1B-213	ENST00000501412	KRTAP4-3	Q9BYR4	195 aa		7.54	□□□□□ -1.2
RAP1B-213	ENST00000501412	DST	Q03001	7570 aa	Known RBP	7.35	□□□□□ -1.23
RAP1B-213	ENST00000501412	SPRR5	A0A1B0GTR4	108 aa		7.29	□□□□□ -1.24
RAP1B-213	ENST00000501412	KRTAP9-6	A8MVA2	160 aa		7.25	□□□□□ -1.25
RAP1B-213	ENST00000501412	KRTAP4-9	Q9BYQ8	210 aa		7.14	□□□□□ -1.27
RAP1B-213	ENST00000501412	KRTAP4-12	Q9BQ66	201 aa		7.04	□□□□□ -1.28
RAP1B-213	ENST00000501412	KRTAP5-5	Q701N2	237 aa	Predicted RBP	7.04	□□□□□ -1.28
RAP1B-213	ENST00000501412	LCE1D	Q5T752	114 aa		6.97	□□□□□ -1.29
RAP1B-213	ENST00000501412	LCE4A	Q5TA78	99 aa		6.95	□□□□□ -1.3
RAP1B-213	ENST00000501412	GPR98	Q8WXG9	6306 aa		6.91	□□□□□ -1.3
RAP1B-213	ENST00000501412	KRTAP9-9	Q9BYP9	154 aa		6.91	□□□□□ -1.3
RAP1B-213	ENST00000501412	KRTAP9-4	Q9BYQ2	154 aa		6.91	□□□□□ -1.3
RAP1B-213	ENST00000501412	MT4	P47944	62 aa		6.89	□□□□□ -1.31
RAP1B-213	ENST00000501412	KRTAP5-4	Q6L8H1	288 aa		6.89	□□□□□ -1.31
RAP1B-213	ENST00000501412	HMCN1	Q96RW7	5635 aa		6.82	□□□□□ -1.32
RAP1B-213	ENST00000501412	MT1A	P04731	61 aa		6.76	□□□□□ -1.33
RAP1B-213	ENST00000501412	KRTAP6-1	Q3LI64	71 aa		6.7	□□□□□ -1.34
RAP1B-213	ENST00000501412	LUZP6	Q538Z0	58 aa		6.7	□□□□□ -1.34
RAP1B-213	ENST00000501412	SYNE1	Q8NF91	8797 aa	Known RBP	6.58	□□□□□ -1.36
RAP1B-213	ENST00000501412	AHNAK2	Q8IVF2	5795 aa		6.57	□□□□□ -1.36
RAP1B-213	ENST00000501412	KRTAP12-4	P60329	112 aa		6.53	□□□□□ -1.36
RAP1B-213	ENST00000501412	KRTAP5-10	Q6L8G5	202 aa		6.47	□□□□□ -1.37
RAP1B-213	ENST00000501412	KRTAP20-2	Q3LI61	65 aa		6.45	□□□□□ -1.38
RAP1B-213	ENST00000501412	KRTAP5-3	Q6L8H2	238 aa		6.33	□□□□□ -1.4
RAP1B-213	ENST00000501412	NDUFAF8	A1L188	74 aa		6.32	□□□□□ -1.4
RAP1B-213	ENST00000501412	KRTAP4-2	Q9BYR5	136 aa		6.31	□□□□□ -1.4
RAP1B-213	ENST00000501412	KRTAP6-2	Q3LI66	62 aa		6.22	□□□□□ -1.41
RAP1B-213	ENST00000501412	KRTAP5-7	Q6L8G8	165 aa		6.22	□□□□□ -1.41
RAP1B-213	ENST00000501412	KRTAP5-2	Q701N4	177 aa		6.2	□□□□□ -1.42
RAP1B-213	ENST00000501412	KRTAP4-11	Q9BYQ6	195 aa		6.17	□□□□□ -1.42
RAP1B-213	ENST00000501412	MT3	P25713	68 aa		6.11	□□□□□ -1.43
RAP1B-213	ENST00000501412	KRTAP5-8	O75690	187 aa		5.7	□□□□□ -1.5
RAP1B-213	ENST00000501412	LCE3D	Q9BYE3	92 aa		5.64	□□□□□ -1.51
RAP1B-213	ENST00000501412	OBSCN	Q5VST9	7968 aa		5.61	□□□□□ -1.51
RAP1B-213	ENST00000501412		A0A0A0MQY5	61 aa		5.58	□□□□□ -1.52
RAP1B-213	ENST00000501412	LCE3E	Q5T5B0	92 aa		5.45	□□□□□ -1.54
RAP1B-213	ENST00000501412	LCE1E	Q5T753	118 aa		5.44	□□□□□ -1.54
RAP1B-213	ENST00000501412	KRTAP5-1	Q6L8H4	278 aa		5.4	□□□□□ -1.54
RAP1B-213	ENST00000501412	MUC5AC	P98088	5654 aa		5.4	□□□□□ -1.55
RAP1B-213	ENST00000501412	MUC5B	Q9HC84	5762 aa	Predicted RBP	5.38	□□□□□ -1.55
RAP1B-213	ENST00000501412	AHNAK	Q09666	5890 aa	Known RBP	5.34	□□□□□ -1.55
RAP1B-213	ENST00000501412	INE1	O15225	51 aa		5.2	□□□□□ -1.58
RAP1B-213	ENST00000501412	LCE1C	Q5T751	118 aa		5.06	□□□□□ -1.6
RAP1B-213	ENST00000501412	LCE1B	Q5T7P3	118 aa		5.06	□□□□□ -1.6
RAP1B-213	ENST00000501412	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.73	□□□□□ -1.65
RAP1B-213	ENST00000501412	PRM1	P04553	51 aa		4.58	□□□□□ -1.68
RAP1B-213	ENST00000501412	KRTAP5-11	Q6L8G4	156 aa		4.51	□□□□□ -1.69
RAP1B-213	ENST00000501412	KRTAP21-2	Q3LI59	83 aa		4.43	□□□□□ -1.7
RAP1B-213	ENST00000501412	LCE1F	Q5T754	118 aa		4.19	□□□□□ -1.74
RAP1B-213	ENST00000501412	KRTAP4-4	Q9BYR3	166 aa		3.9	□□□□□ -1.79
RAP1B-213	ENST00000501412	PHGR1	C9JFL3	82 aa		3.87	□□□□□ -1.79
RAP1B-213	ENST00000501412	MUC19	Q7Z5P9	8384 aa		3.46	□□□□□ -1.85
RAP1B-213	ENST00000501412	KRTAP21-1	Q3LI58	79 aa		2.85	□□□□□ -1.95
RAP1B-213	ENST00000501412	MUC16	Q8WXI7	14507 aa		2.47	□□□□□ -2.01

Retrieved 78 of 20,778 RNA–protein pairs in 119 ms