RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 SERP1Q9Y6X1 66 aa5.12□□□□□ -1.59
SEC61A1-207ENST00000498837 KRTAP5-3Q6L8H2 238 aa5.11□□□□□ -1.59
SEC61A1-207ENST00000498837 ATP5EP56381 51 aaPredicted RBP5.09□□□□□ -1.59
SEC61A1-207ENST00000498837 SPATA8Q6RVD6 105 aa5.07□□□□□ -1.6
SEC61A1-207ENST00000498837 SPINT4Q6UDR6 99 aa5.04□□□□□ -1.6
SEC61A1-207ENST00000498837 A0A1B0GU33 70 aa5.03□□□□□ -1.6
SEC61A1-207ENST00000498837 KRTAP12-1P59990 96 aa5□□□□□ -1.61
SEC61A1-207ENST00000498837 C10orf95Q9H7T3 257 aa5□□□□□ -1.61
SEC61A1-207ENST00000498837 SMIM26A0A096LP01 95 aa4.97□□□□□ -1.61
SEC61A1-207ENST00000498837 KRTAP20-2Q3LI61 65 aa4.97□□□□□ -1.61
SEC61A1-207ENST00000498837 LCE3AQ5TA76 89 aa4.96□□□□□ -1.62
SEC61A1-207ENST00000498837 PRO0628Q9UI54 55 aa4.96□□□□□ -1.62
SEC61A1-207ENST00000498837 KRTAP4-7Q9BYR0 210 aa4.95□□□□□ -1.62
SEC61A1-207ENST00000498837 SPRR5A0A1B0GTR4 108 aa4.94□□□□□ -1.62
SEC61A1-207ENST00000498837 A0A1B0GU69 56 aa4.93□□□□□ -1.62
SEC61A1-207ENST00000498837 A8MU10 97 aa4.89□□□□□ -1.63
SEC61A1-207ENST00000498837 KRTAP5-5Q701N2 237 aaPredicted RBP4.84□□□□□ -1.63
SEC61A1-207ENST00000498837 TNP1P09430 55 aa4.81□□□□□ -1.64
SEC61A1-207ENST00000498837 PRR15LQ9BU68 103 aa4.81□□□□□ -1.64
SEC61A1-207ENST00000498837 V9GYY9 64 aa4.81□□□□□ -1.64
SEC61A1-207ENST00000498837 KRTAP12-4P60329 112 aa4.79□□□□□ -1.64
SEC61A1-207ENST00000498837 Q1T7F1 81 aa4.77□□□□□ -1.65
SEC61A1-207ENST00000498837 LINC01558Q9Y6Z2 57 aa4.76□□□□□ -1.65
SEC61A1-207ENST00000498837 KRTAP12-3P60328 96 aa4.75□□□□□ -1.65
SEC61A1-207ENST00000498837 BRK1Q8WUW1 75 aa4.69□□□□□ -1.66
SEC61A1-207ENST00000498837 SYNE1Q8NF91 8797 aaKnown RBP4.68□□□□□ -1.66
SEC61A1-207ENST00000498837 PMAIP1Q13794 54 aa4.63□□□□□ -1.67
SEC61A1-207ENST00000498837 UQCR11O14957 56 aa4.62□□□□□ -1.67
SEC61A1-207ENST00000498837 KRTAP4-11Q9BYQ6 195 aa4.62□□□□□ -1.67
SEC61A1-207ENST00000498837 H3BS24 57 aa4.6□□□□□ -1.67
SEC61A1-207ENST00000498837 KRTAP4-12Q9BQ66 201 aa4.6□□□□□ -1.67
SEC61A1-207ENST00000498837 KRTAP9-9Q9BYP9 154 aa4.52□□□□□ -1.69
SEC61A1-207ENST00000498837 KRTAP9-4Q9BYQ2 154 aa4.52□□□□□ -1.69
SEC61A1-207ENST00000498837 MIR22HGQ0VDD5 57 aa4.51□□□□□ -1.69
SEC61A1-207ENST00000498837 KTN1-AS1Q86SY8 53 aa4.51□□□□□ -1.69
SEC61A1-207ENST00000498837 K7ERS5 55 aa4.5□□□□□ -1.69
SEC61A1-207ENST00000498837 KRTAP5-2Q701N4 177 aa4.5□□□□□ -1.69
SEC61A1-207ENST00000498837 CDC42SE1Q9NRR8 79 aa4.5□□□□□ -1.69
SEC61A1-207ENST00000498837 KRTAP5-8O75690 187 aa4.49□□□□□ -1.69
SEC61A1-207ENST00000498837 PSPHP1O15172 72 aa4.48□□□□□ -1.69
SEC61A1-207ENST00000498837 MUC5ACP98088 5654 aa4.46□□□□□ -1.69
SEC61A1-207ENST00000498837 AHNAKQ09666 5890 aaKnown RBP4.46□□□□□ -1.69
SEC61A1-207ENST00000498837 MUC5BQ9HC84 5762 aaPredicted RBP4.46□□□□□ -1.7
SEC61A1-207ENST00000498837 KRTAP25-1Q3LHN0 102 aa4.46□□□□□ -1.7
SEC61A1-207ENST00000498837 A6NED7 52 aa4.42□□□□□ -1.7
SEC61A1-207ENST00000498837 KRTAP6-1Q3LI64 71 aa4.42□□□□□ -1.7
SEC61A1-207ENST00000498837 KRTAP19-4Q3LI73 84 aa4.39□□□□□ -1.71
SEC61A1-207ENST00000498837 MT1AP04731 61 aa4.38□□□□□ -1.71
SEC61A1-207ENST00000498837 LCE3CQ5T5A8 94 aa4.34□□□□□ -1.71
SEC61A1-207ENST00000498837 OBSCNQ5VST9 7968 aa4.33□□□□□ -1.72
SEC61A1-207ENST00000498837 KRTAP23-1A1A580 65 aa4.31□□□□□ -1.72
SEC61A1-207ENST00000498837 KRTAP15-1Q3LI76 137 aa4.3□□□□□ -1.72
SEC61A1-207ENST00000498837 KRTAP6-2Q3LI66 62 aa4.28□□□□□ -1.72
SEC61A1-207ENST00000498837 KRTAP9-6A8MVA2 160 aa4.14□□□□□ -1.75
SEC61A1-207ENST00000498837 ROMO1P60602 79 aa4.13□□□□□ -1.75
SEC61A1-207ENST00000498837 KRTAP5-1Q6L8H4 278 aa4.13□□□□□ -1.75
SEC61A1-207ENST00000498837 KRTAP4-2Q9BYR5 136 aa4.12□□□□□ -1.75
SEC61A1-207ENST00000498837 MT3P25713 68 aa4.02□□□□□ -1.77
SEC61A1-207ENST00000498837 PRAC1Q96KF2 57 aa4.01□□□□□ -1.77
SEC61A1-207ENST00000498837 LCE1EQ5T753 118 aa3.77□□□□□ -1.81
SEC61A1-207ENST00000498837 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
SEC61A1-207ENST00000498837 LCE1CQ5T751 118 aa3.51□□□□□ -1.85
SEC61A1-207ENST00000498837 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
SEC61A1-207ENST00000498837 LUZP6Q538Z0 58 aa3.39□□□□□ -1.87
SEC61A1-207ENST00000498837 A0A0A0MQY5 61 aa3.36□□□□□ -1.87
SEC61A1-207ENST00000498837 KRTAP5-11Q6L8G4 156 aa3.25□□□□□ -1.89
SEC61A1-207ENST00000498837 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
SEC61A1-207ENST00000498837 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.14□□□□□ -1.91
SEC61A1-207ENST00000498837 PHGR1C9JFL3 82 aa3.11□□□□□ -1.91
SEC61A1-207ENST00000498837 INE1O15225 51 aa3.1□□□□□ -1.91
SEC61A1-207ENST00000498837 LCE3DQ9BYE3 92 aa3.04□□□□□ -1.92
SEC61A1-207ENST00000498837 KRTAP21-2Q3LI59 83 aa2.91□□□□□ -1.94
SEC61A1-207ENST00000498837 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
SEC61A1-207ENST00000498837 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
SEC61A1-207ENST00000498837 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
SEC61A1-207ENST00000498837 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
SEC61A1-207ENST00000498837 PRM1P04553 51 aa2.12□□□□□ -2.07
SEC61A1-207ENST00000498837 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 69.8 ms