RNA–Protein interactions for RNA: ENST00000498698.1

HMGCL-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-207ENST00000498698 LCE5AQ5TCM9 118 aa3.54□□□□□ -1.84
HMGCL-207ENST00000498698 CDC42SE1Q9NRR8 79 aa3.52□□□□□ -1.85
HMGCL-207ENST00000498698 KRTAP12-1P59990 96 aa3.51□□□□□ -1.85
HMGCL-207ENST00000498698 SPINT4Q6UDR6 99 aa3.51□□□□□ -1.85
HMGCL-207ENST00000498698 KRTAP19-3Q7Z4W3 81 aa3.51□□□□□ -1.85
HMGCL-207ENST00000498698 UQCR11O14957 56 aa3.48□□□□□ -1.85
HMGCL-207ENST00000498698 DSTQ03001 7570 aaKnown RBP3.47□□□□□ -1.85
HMGCL-207ENST00000498698 MIR22HGQ0VDD5 57 aa3.46□□□□□ -1.86
HMGCL-207ENST00000498698 KRTAP19-5Q3LI72 72 aa3.46□□□□□ -1.86
HMGCL-207ENST00000498698 A8MU10 97 aa3.42□□□□□ -1.86
HMGCL-207ENST00000498698 MT1GP13640 62 aa3.42□□□□□ -1.86
HMGCL-207ENST00000498698 K7ERS5 55 aa3.4□□□□□ -1.87
HMGCL-207ENST00000498698 KTN1-AS1Q86SY8 53 aa3.4□□□□□ -1.87
HMGCL-207ENST00000498698 KRTAP4-9Q9BYQ8 210 aa3.39□□□□□ -1.87
HMGCL-207ENST00000498698 PP632Q6XCG6 107 aa3.37□□□□□ -1.87
HMGCL-207ENST00000498698 MT1MQ8N339 61 aa3.37□□□□□ -1.87
HMGCL-207ENST00000498698 MT1LQ93083 61 aa3.37□□□□□ -1.87
HMGCL-207ENST00000498698 C10orf95Q9H7T3 257 aa3.37□□□□□ -1.87
HMGCL-207ENST00000498698 LCE3AQ5TA76 89 aa3.36□□□□□ -1.87
HMGCL-207ENST00000498698 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
HMGCL-207ENST00000498698 GPR98Q8WXG9 6306 aa3.34□□□□□ -1.87
HMGCL-207ENST00000498698 TNP1P09430 55 aa3.34□□□□□ -1.87
HMGCL-207ENST00000498698 LCE1DQ5T752 114 aa3.31□□□□□ -1.88
HMGCL-207ENST00000498698 LCE4AQ5TA78 99 aa3.3□□□□□ -1.88
HMGCL-207ENST00000498698 KRTAP4-3Q9BYR4 195 aa3.3□□□□□ -1.88
HMGCL-207ENST00000498698 LUZP6Q538Z0 58 aa3.27□□□□□ -1.89
HMGCL-207ENST00000498698 MT4P47944 62 aa3.26□□□□□ -1.89
HMGCL-207ENST00000498698 KRTAP5-4Q6L8H1 288 aa3.25□□□□□ -1.89
HMGCL-207ENST00000498698 HMCN1Q96RW7 5635 aa3.24□□□□□ -1.89
HMGCL-207ENST00000498698 KRTAP12-3P60328 96 aa3.23□□□□□ -1.89
HMGCL-207ENST00000498698 KRTAP9-9Q9BYP9 154 aa3.23□□□□□ -1.89
HMGCL-207ENST00000498698 KRTAP9-4Q9BYQ2 154 aa3.23□□□□□ -1.89
HMGCL-207ENST00000498698 KRTAP4-7Q9BYR0 210 aa3.21□□□□□ -1.9
HMGCL-207ENST00000498698 ROMO1P60602 79 aa3.16□□□□□ -1.9
HMGCL-207ENST00000498698 AHNAK2Q8IVF2 5795 aa3.15□□□□□ -1.91
HMGCL-207ENST00000498698 KRTAP25-1Q3LHN0 102 aa3.14□□□□□ -1.91
HMGCL-207ENST00000498698 NDUFAF8A1L188 74 aa3.12□□□□□ -1.91
HMGCL-207ENST00000498698 KRTAP5-10Q6L8G5 202 aa3.11□□□□□ -1.91
HMGCL-207ENST00000498698 KRTAP5-5Q701N2 237 aaPredicted RBP3.1□□□□□ -1.91
HMGCL-207ENST00000498698 KRTAP15-1Q3LI76 137 aa3.09□□□□□ -1.91
HMGCL-207ENST00000498698 KRTAP19-4Q3LI73 84 aa3.07□□□□□ -1.92
HMGCL-207ENST00000498698 KRTAP20-2Q3LI61 65 aa3.06□□□□□ -1.92
HMGCL-207ENST00000498698 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
HMGCL-207ENST00000498698 SPRR5A0A1B0GTR4 108 aa3.04□□□□□ -1.92
HMGCL-207ENST00000498698 KRTAP5-3Q6L8H2 238 aa3.03□□□□□ -1.92
HMGCL-207ENST00000498698 KRTAP12-4P60329 112 aa3.01□□□□□ -1.93
HMGCL-207ENST00000498698 KRTAP5-7Q6L8G8 165 aa2.99□□□□□ -1.93
HMGCL-207ENST00000498698 LCE3CQ5T5A8 94 aa2.97□□□□□ -1.93
HMGCL-207ENST00000498698 SYNE1Q8NF91 8797 aaKnown RBP2.95□□□□□ -1.94
HMGCL-207ENST00000498698 KRTAP4-11Q9BYQ6 195 aa2.9□□□□□ -1.95
HMGCL-207ENST00000498698 MT1AP04731 61 aa2.87□□□□□ -1.95
HMGCL-207ENST00000498698 KRTAP6-1Q3LI64 71 aa2.85□□□□□ -1.95
HMGCL-207ENST00000498698 KRTAP5-2Q701N4 177 aa2.84□□□□□ -1.95
HMGCL-207ENST00000498698 KRTAP9-6A8MVA2 160 aa2.83□□□□□ -1.96
HMGCL-207ENST00000498698 KRTAP6-2Q3LI66 62 aa2.73□□□□□ -1.97
HMGCL-207ENST00000498698 KRTAP5-8O75690 187 aa2.72□□□□□ -1.97
HMGCL-207ENST00000498698 OBSCNQ5VST9 7968 aa2.66□□□□□ -1.98
HMGCL-207ENST00000498698 MT3P25713 68 aa2.62□□□□□ -1.99
HMGCL-207ENST00000498698 AHNAKQ09666 5890 aaKnown RBP2.62□□□□□ -1.99
HMGCL-207ENST00000498698 MUC5ACP98088 5654 aa2.61□□□□□ -1.99
HMGCL-207ENST00000498698 MUC5BQ9HC84 5762 aaPredicted RBP2.61□□□□□ -1.99
HMGCL-207ENST00000498698 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
HMGCL-207ENST00000498698 INE1O15225 51 aa2.44□□□□□ -2.02
HMGCL-207ENST00000498698 LCE1EQ5T753 118 aa2.43□□□□□ -2.02
HMGCL-207ENST00000498698 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
HMGCL-207ENST00000498698 LCE1BQ5T7P3 118 aa2.27□□□□□ -2.05
HMGCL-207ENST00000498698 LCE1CQ5T751 118 aa2.25□□□□□ -2.05
HMGCL-207ENST00000498698 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.17□□□□□ -2.06
HMGCL-207ENST00000498698 LCE3DQ9BYE3 92 aa2.12□□□□□ -2.07
HMGCL-207ENST00000498698 KRTAP5-11Q6L8G4 156 aa2.04□□□□□ -2.08
HMGCL-207ENST00000498698 LCE3EQ5T5B0 92 aa2.02□□□□□ -2.09
HMGCL-207ENST00000498698 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
HMGCL-207ENST00000498698 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
HMGCL-207ENST00000498698 KRTAP4-4Q9BYR3 166 aa1.77□□□□□ -2.13
HMGCL-207ENST00000498698 PRM1P04553 51 aa1.65□□□□□ -2.15
HMGCL-207ENST00000498698 MUC19Q7Z5P9 8384 aa1.63□□□□□ -2.15
HMGCL-207ENST00000498698 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
HMGCL-207ENST00000498698 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 53.4 ms