RNA–Protein interactions for RNA: ENST00000498627.1

PUM1-212, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-212ENST00000498627 LCE3CQ5T5A8 94 aa3.32□□□□□ -1.88
PUM1-212ENST00000498627 SPINT4Q6UDR6 99 aa3.32□□□□□ -1.88
PUM1-212ENST00000498627 KRTAP12-1P59990 96 aa3.3□□□□□ -1.88
PUM1-212ENST00000498627 KRTAP12-2P59991 146 aa3.3□□□□□ -1.88
PUM1-212ENST00000498627 PSPHP1O15172 72 aa3.29□□□□□ -1.88
PUM1-212ENST00000498627 SPRR2EP22531 72 aa3.29□□□□□ -1.88
PUM1-212ENST00000498627 SPRR2BP35325 72 aa3.29□□□□□ -1.88
PUM1-212ENST00000498627 SPRR2AP35326 72 aa3.29□□□□□ -1.88
PUM1-212ENST00000498627 CAMK2N1Q7Z7J9 78 aa3.29□□□□□ -1.88
PUM1-212ENST00000498627 SMIM26A0A096LP01 95 aa3.28□□□□□ -1.88
PUM1-212ENST00000498627 GPR98Q8WXG9 6306 aa3.27□□□□□ -1.89
PUM1-212ENST00000498627 Q1T7F1 81 aa3.26□□□□□ -1.89
PUM1-212ENST00000498627 UQCR11O14957 56 aa3.24□□□□□ -1.89
PUM1-212ENST00000498627 RPS28P62857 69 aaKnown RBP3.24□□□□□ -1.89
PUM1-212ENST00000498627 V9GYY9 64 aa3.24□□□□□ -1.89
PUM1-212ENST00000498627 SPRR2FQ96RM1 72 aa3.23□□□□□ -1.89
PUM1-212ENST00000498627 MIR22HGQ0VDD5 57 aa3.21□□□□□ -1.9
PUM1-212ENST00000498627 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.21□□□□□ -1.9
PUM1-212ENST00000498627 SPRR2DP22532 72 aa3.2□□□□□ -1.9
PUM1-212ENST00000498627 KRTAP8-1Q8IUC2 63 aa3.18□□□□□ -1.9
PUM1-212ENST00000498627 C10orf95Q9H7T3 257 aa3.17□□□□□ -1.9
PUM1-212ENST00000498627 A6NED7 52 aa3.15□□□□□ -1.91
PUM1-212ENST00000498627 KRTAP9-6A8MVA2 160 aa3.12□□□□□ -1.91
PUM1-212ENST00000498627 K7ERS5 55 aa3.07□□□□□ -1.92
PUM1-212ENST00000498627 TNP1P09430 55 aa3.06□□□□□ -1.92
PUM1-212ENST00000498627 KRTAP19-7Q3SYF9 63 aa3.04□□□□□ -1.92
PUM1-212ENST00000498627 LCE3AQ5TA76 89 aa3.04□□□□□ -1.92
PUM1-212ENST00000498627 KRTAP19-5Q3LI72 72 aa3.03□□□□□ -1.92
PUM1-212ENST00000498627 CDC42SE1Q9NRR8 79 aa3.03□□□□□ -1.92
PUM1-212ENST00000498627 LCE3EQ5T5B0 92 aa3.02□□□□□ -1.93
PUM1-212ENST00000498627 MT1EP04732 61 aa3□□□□□ -1.93
PUM1-212ENST00000498627 KRTAP25-1Q3LHN0 102 aa2.96□□□□□ -1.94
PUM1-212ENST00000498627 KRTAP5-10Q6L8G5 202 aa2.95□□□□□ -1.94
PUM1-212ENST00000498627 DSTQ03001 7570 aaKnown RBP2.95□□□□□ -1.94
PUM1-212ENST00000498627 KRTAP5-7Q6L8G8 165 aa2.94□□□□□ -1.94
PUM1-212ENST00000498627 ROMO1P60602 79 aa2.93□□□□□ -1.94
PUM1-212ENST00000498627 KRTAP19-3Q7Z4W3 81 aa2.92□□□□□ -1.94
PUM1-212ENST00000498627 BRK1Q8WUW1 75 aa2.92□□□□□ -1.94
PUM1-212ENST00000498627 KRTAP12-3P60328 96 aa2.9□□□□□ -1.95
PUM1-212ENST00000498627 MT1LQ93083 61 aa2.9□□□□□ -1.95
PUM1-212ENST00000498627 AHNAK2Q8IVF2 5795 aa2.87□□□□□ -1.95
PUM1-212ENST00000498627 MT1GP13640 62 aa2.86□□□□□ -1.95
PUM1-212ENST00000498627 MT1MQ8N339 61 aa2.85□□□□□ -1.95
PUM1-212ENST00000498627 KRTAP4-3Q9BYR4 195 aa2.84□□□□□ -1.95
PUM1-212ENST00000498627 HMCN1Q96RW7 5635 aa2.83□□□□□ -1.96
PUM1-212ENST00000498627 SPRR5A0A1B0GTR4 108 aa2.82□□□□□ -1.96
PUM1-212ENST00000498627 KRTAP5-1Q6L8H4 278 aa2.82□□□□□ -1.96
PUM1-212ENST00000498627 PP632Q6XCG6 107 aa2.8□□□□□ -1.96
PUM1-212ENST00000498627 MT4P47944 62 aa2.78□□□□□ -1.96
PUM1-212ENST00000498627 PMAIP1Q13794 54 aa2.74□□□□□ -1.97
PUM1-212ENST00000498627 KRTAP5-4Q6L8H1 288 aa2.68□□□□□ -1.98
PUM1-212ENST00000498627 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
PUM1-212ENST00000498627 PRO0628Q9UI54 55 aa2.66□□□□□ -1.98
PUM1-212ENST00000498627 KRTAP5-5Q701N2 237 aaPredicted RBP2.57□□□□□ -2
PUM1-212ENST00000498627 KRTAP20-2Q3LI61 65 aa2.53□□□□□ -2
PUM1-212ENST00000498627 SYNE1Q8NF91 8797 aaKnown RBP2.53□□□□□ -2.01
PUM1-212ENST00000498627 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
PUM1-212ENST00000498627 KTN1-AS1Q86SY8 53 aa2.5□□□□□ -2.01
PUM1-212ENST00000498627 LCE3DQ9BYE3 92 aa2.5□□□□□ -2.01
PUM1-212ENST00000498627 KRTAP12-4P60329 112 aa2.47□□□□□ -2.01
PUM1-212ENST00000498627 KRTAP6-1Q3LI64 71 aa2.47□□□□□ -2.01
PUM1-212ENST00000498627 MUC5ACP98088 5654 aa2.46□□□□□ -2.01
PUM1-212ENST00000498627 MT1AP04731 61 aa2.45□□□□□ -2.02
PUM1-212ENST00000498627 OBSCNQ5VST9 7968 aa2.44□□□□□ -2.02
PUM1-212ENST00000498627 MUC5BQ9HC84 5762 aaPredicted RBP2.43□□□□□ -2.02
PUM1-212ENST00000498627 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
PUM1-212ENST00000498627 KRTAP6-2Q3LI66 62 aa2.31□□□□□ -2.04
PUM1-212ENST00000498627 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
PUM1-212ENST00000498627 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
PUM1-212ENST00000498627 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
PUM1-212ENST00000498627 LUZP6Q538Z0 58 aa2.12□□□□□ -2.07
PUM1-212ENST00000498627 MUC19Q7Z5P9 8384 aa1.79□□□□□ -2.12
PUM1-212ENST00000498627 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
PUM1-212ENST00000498627 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
PUM1-212ENST00000498627 PRM1P04553 51 aa1.54□□□□□ -2.16
PUM1-212ENST00000498627 INE1O15225 51 aa1.51□□□□□ -2.17
PUM1-212ENST00000498627 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
PUM1-212ENST00000498627 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 67.2 ms