RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 SEC61GP60059 68 aa4.73□□□□□ -1.65
THBS3-209ENST00000498500 CDC42SE1Q9NRR8 79 aa4.72□□□□□ -1.65
THBS3-209ENST00000498500 PRR15LQ9BU68 103 aa4.68□□□□□ -1.66
THBS3-209ENST00000498500 KTN1-AS1Q86SY8 53 aa4.67□□□□□ -1.66
THBS3-209ENST00000498500 A6NED7 52 aa4.65□□□□□ -1.67
THBS3-209ENST00000498500 SPATA8Q6RVD6 105 aa4.64□□□□□ -1.67
THBS3-209ENST00000498500 A0A0D9SG42 100 aa4.63□□□□□ -1.67
THBS3-209ENST00000498500 A0A1B0GU33 70 aa4.62□□□□□ -1.67
THBS3-209ENST00000498500 CAMK2N1Q7Z7J9 78 aa4.62□□□□□ -1.67
THBS3-209ENST00000498500 A0A1B0GU69 56 aa4.58□□□□□ -1.68
THBS3-209ENST00000498500 KRTAP12-1P59990 96 aa4.58□□□□□ -1.68
THBS3-209ENST00000498500 SPINT4Q6UDR6 99 aa4.53□□□□□ -1.68
THBS3-209ENST00000498500 A8MU10 97 aa4.52□□□□□ -1.69
THBS3-209ENST00000498500 MT4P47944 62 aa4.52□□□□□ -1.69
THBS3-209ENST00000498500 KRTAP19-3Q7Z4W3 81 aa4.52□□□□□ -1.69
THBS3-209ENST00000498500 KRTAP5-3Q6L8H2 238 aa4.51□□□□□ -1.69
THBS3-209ENST00000498500 UQCR11O14957 56 aa4.5□□□□□ -1.69
THBS3-209ENST00000498500 KRTAP19-7Q3SYF9 63 aa4.49□□□□□ -1.69
THBS3-209ENST00000498500 HMCN1Q96RW7 5635 aa4.48□□□□□ -1.69
THBS3-209ENST00000498500 AHNAK2Q8IVF2 5795 aa4.47□□□□□ -1.69
THBS3-209ENST00000498500 MT1EP04732 61 aa4.46□□□□□ -1.7
THBS3-209ENST00000498500 KRTAP5-10Q6L8G5 202 aa4.46□□□□□ -1.7
THBS3-209ENST00000498500 MIR22HGQ0VDD5 57 aa4.42□□□□□ -1.7
THBS3-209ENST00000498500 MT1GP13640 62 aa4.37□□□□□ -1.71
THBS3-209ENST00000498500 KRTAP19-5Q3LI72 72 aa4.37□□□□□ -1.71
THBS3-209ENST00000498500 C10orf95Q9H7T3 257 aa4.37□□□□□ -1.71
THBS3-209ENST00000498500 PP632Q6XCG6 107 aa4.36□□□□□ -1.71
THBS3-209ENST00000498500 KRTAP5-7Q6L8G8 165 aa4.33□□□□□ -1.72
THBS3-209ENST00000498500 LCE3AQ5TA76 89 aa4.31□□□□□ -1.72
THBS3-209ENST00000498500 KRTAP5-4Q6L8H1 288 aa4.3□□□□□ -1.72
THBS3-209ENST00000498500 TNP1P09430 55 aa4.29□□□□□ -1.72
THBS3-209ENST00000498500 MT1MQ8N339 61 aa4.28□□□□□ -1.72
THBS3-209ENST00000498500 KRTAP23-1A1A580 65 aa4.26□□□□□ -1.73
THBS3-209ENST00000498500 MT1LQ93083 61 aa4.26□□□□□ -1.73
THBS3-209ENST00000498500 SPRR5A0A1B0GTR4 108 aa4.23□□□□□ -1.73
THBS3-209ENST00000498500 K7ERS5 55 aa4.23□□□□□ -1.73
THBS3-209ENST00000498500 KRTAP15-1Q3LI76 137 aa4.22□□□□□ -1.73
THBS3-209ENST00000498500 KRTAP4-3Q9BYR4 195 aa4.21□□□□□ -1.74
THBS3-209ENST00000498500 PRAC1Q96KF2 57 aa4.2□□□□□ -1.74
THBS3-209ENST00000498500 KRTAP25-1Q3LHN0 102 aa4.16□□□□□ -1.74
THBS3-209ENST00000498500 KRTAP12-3P60328 96 aa4.12□□□□□ -1.75
THBS3-209ENST00000498500 KRTAP20-2Q3LI61 65 aa4.1□□□□□ -1.75
THBS3-209ENST00000498500 ROMO1P60602 79 aa4.07□□□□□ -1.76
THBS3-209ENST00000498500 KRTAP12-4P60329 112 aa3.99□□□□□ -1.77
THBS3-209ENST00000498500 KRTAP5-5Q701N2 237 aaPredicted RBP3.94□□□□□ -1.78
THBS3-209ENST00000498500 SYNE1Q8NF91 8797 aaKnown RBP3.84□□□□□ -1.8
THBS3-209ENST00000498500 LCE3CQ5T5A8 94 aa3.79□□□□□ -1.8
THBS3-209ENST00000498500 KRTAP5-8O75690 187 aa3.74□□□□□ -1.81
THBS3-209ENST00000498500 MUC5ACP98088 5654 aa3.74□□□□□ -1.81
THBS3-209ENST00000498500 AHNAKQ09666 5890 aaKnown RBP3.73□□□□□ -1.81
THBS3-209ENST00000498500 MUC5BQ9HC84 5762 aaPredicted RBP3.71□□□□□ -1.82
THBS3-209ENST00000498500 KRTAP5-2Q701N4 177 aa3.69□□□□□ -1.82
THBS3-209ENST00000498500 KRTAP9-6A8MVA2 160 aa3.64□□□□□ -1.83
THBS3-209ENST00000498500 NDUFAF8A1L188 74 aa3.63□□□□□ -1.83
THBS3-209ENST00000498500 MT1AP04731 61 aa3.62□□□□□ -1.83
THBS3-209ENST00000498500 KRTAP6-1Q3LI64 71 aa3.6□□□□□ -1.83
THBS3-209ENST00000498500 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
THBS3-209ENST00000498500 LUZP6Q538Z0 58 aa3.53□□□□□ -1.84
THBS3-209ENST00000498500 KRTAP6-2Q3LI66 62 aa3.5□□□□□ -1.85
THBS3-209ENST00000498500 A0A0A0MQY5 61 aa3.45□□□□□ -1.86
THBS3-209ENST00000498500 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
THBS3-209ENST00000498500 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.42□□□□□ -1.86
THBS3-209ENST00000498500 KRTAP5-1Q6L8H4 278 aa3.39□□□□□ -1.87
THBS3-209ENST00000498500 MT3P25713 68 aa3.3□□□□□ -1.88
THBS3-209ENST00000498500 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
THBS3-209ENST00000498500 INE1O15225 51 aa3.21□□□□□ -1.9
THBS3-209ENST00000498500 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
THBS3-209ENST00000498500 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
THBS3-209ENST00000498500 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
THBS3-209ENST00000498500 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
THBS3-209ENST00000498500 LCE3DQ9BYE3 92 aa2.72□□□□□ -1.97
THBS3-209ENST00000498500 PHGR1C9JFL3 82 aa2.64□□□□□ -1.99
THBS3-209ENST00000498500 LCE3EQ5T5B0 92 aa2.58□□□□□ -2
THBS3-209ENST00000498500 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
THBS3-209ENST00000498500 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
THBS3-209ENST00000498500 PRM1P04553 51 aa2.11□□□□□ -2.07
THBS3-209ENST00000498500 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
THBS3-209ENST00000498500 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 61.3 ms