RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 CAMK2N1Q7Z7J9 78 aa5.99□□□□□ -1.45
MUC1-220ENST00000498431 AHNAK2Q8IVF2 5795 aa5.93□□□□□ -1.46
MUC1-220ENST00000498431 A6NED7 52 aa5.93□□□□□ -1.46
MUC1-220ENST00000498431 MT4P47944 62 aa5.91□□□□□ -1.46
MUC1-220ENST00000498431 LCE4AQ5TA78 99 aa5.87□□□□□ -1.47
MUC1-220ENST00000498431 K7ERS5 55 aa5.82□□□□□ -1.48
MUC1-220ENST00000498431 MT1GP13640 62 aa5.82□□□□□ -1.48
MUC1-220ENST00000498431 KRTAP5-10Q6L8G5 202 aa5.82□□□□□ -1.48
MUC1-220ENST00000498431 KRTAP19-5Q3LI72 72 aa5.79□□□□□ -1.48
MUC1-220ENST00000498431 MT1MQ8N339 61 aa5.76□□□□□ -1.49
MUC1-220ENST00000498431 CDC42SE1Q9NRR8 79 aa5.76□□□□□ -1.49
MUC1-220ENST00000498431 PP632Q6XCG6 107 aa5.74□□□□□ -1.49
MUC1-220ENST00000498431 KRTAP4-6Q9BYQ5 205 aa5.73□□□□□ -1.49
MUC1-220ENST00000498431 KRTAP5-4Q6L8H1 288 aa5.72□□□□□ -1.49
MUC1-220ENST00000498431 C10orf95Q9H7T3 257 aa5.7□□□□□ -1.5
MUC1-220ENST00000498431 KRTAP4-3Q9BYR4 195 aa5.69□□□□□ -1.5
MUC1-220ENST00000498431 MT1LQ93083 61 aa5.68□□□□□ -1.5
MUC1-220ENST00000498431 TNP1P09430 55 aa5.62□□□□□ -1.51
MUC1-220ENST00000498431 KRTAP5-7Q6L8G8 165 aa5.62□□□□□ -1.51
MUC1-220ENST00000498431 KRTAP5-3Q6L8H2 238 aa5.58□□□□□ -1.52
MUC1-220ENST00000498431 BRK1Q8WUW1 75 aa5.56□□□□□ -1.52
MUC1-220ENST00000498431 KRTAP25-1Q3LHN0 102 aa5.52□□□□□ -1.53
MUC1-220ENST00000498431 ROMO1P60602 79 aa5.48□□□□□ -1.53
MUC1-220ENST00000498431 LCE3AQ5TA76 89 aa5.46□□□□□ -1.54
MUC1-220ENST00000498431 KRTAP20-2Q3LI61 65 aa5.44□□□□□ -1.54
MUC1-220ENST00000498431 KRTAP4-7Q9BYR0 210 aa5.43□□□□□ -1.54
MUC1-220ENST00000498431 SPRR5A0A1B0GTR4 108 aa5.39□□□□□ -1.55
MUC1-220ENST00000498431 KRTAP23-1A1A580 65 aa5.34□□□□□ -1.55
MUC1-220ENST00000498431 KRTAP5-5Q701N2 237 aaPredicted RBP5.33□□□□□ -1.56
MUC1-220ENST00000498431 PMAIP1Q13794 54 aa5.26□□□□□ -1.57
MUC1-220ENST00000498431 KRTAP12-3P60328 96 aa5.24□□□□□ -1.57
MUC1-220ENST00000498431 KRTAP12-4P60329 112 aa5.23□□□□□ -1.57
MUC1-220ENST00000498431 PRO0628Q9UI54 55 aa5.23□□□□□ -1.57
MUC1-220ENST00000498431 SYNE1Q8NF91 8797 aaKnown RBP5.18□□□□□ -1.58
MUC1-220ENST00000498431 LOC100996750A0A140TA64 210 aa5.17□□□□□ -1.58
MUC1-220ENST00000498431 KRTAP15-1Q3LI76 137 aa5.05□□□□□ -1.6
MUC1-220ENST00000498431 KRTAP4-11Q9BYQ6 195 aa5.05□□□□□ -1.6
MUC1-220ENST00000498431 KRTAP19-4Q3LI73 84 aa5□□□□□ -1.61
MUC1-220ENST00000498431 KRTAP5-2Q701N4 177 aa4.95□□□□□ -1.62
MUC1-220ENST00000498431 PRAC1Q96KF2 57 aa4.95□□□□□ -1.62
MUC1-220ENST00000498431 AHNAKQ09666 5890 aaKnown RBP4.95□□□□□ -1.62
MUC1-220ENST00000498431 MUC5ACP98088 5654 aa4.94□□□□□ -1.62
MUC1-220ENST00000498431 MUC5BQ9HC84 5762 aaPredicted RBP4.93□□□□□ -1.62
MUC1-220ENST00000498431 KRTAP5-8O75690 187 aa4.91□□□□□ -1.62
MUC1-220ENST00000498431 KTN1-AS1Q86SY8 53 aa4.9□□□□□ -1.63
MUC1-220ENST00000498431 LCE3CQ5T5A8 94 aa4.87□□□□□ -1.63
MUC1-220ENST00000498431 KRTAP6-1Q3LI64 71 aa4.85□□□□□ -1.63
MUC1-220ENST00000498431 MT1AP04731 61 aa4.81□□□□□ -1.64
MUC1-220ENST00000498431 H3BS24 57 aa4.76□□□□□ -1.65
MUC1-220ENST00000498431 OBSCNQ5VST9 7968 aa4.75□□□□□ -1.65
MUC1-220ENST00000498431 KRTAP6-2Q3LI66 62 aa4.7□□□□□ -1.66
MUC1-220ENST00000498431 KRTAP9-9Q9BYP9 154 aa4.69□□□□□ -1.66
MUC1-220ENST00000498431 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
MUC1-220ENST00000498431 SVIPQ8NHG7 77 aa4.65□□□□□ -1.67
MUC1-220ENST00000498431 KRTAP9-6A8MVA2 160 aa4.57□□□□□ -1.68
MUC1-220ENST00000498431 KRTAP5-1Q6L8H4 278 aa4.53□□□□□ -1.68
MUC1-220ENST00000498431 MT3P25713 68 aa4.39□□□□□ -1.71
MUC1-220ENST00000498431 KRTAP4-12Q9BQ66 201 aa4.27□□□□□ -1.73
MUC1-220ENST00000498431 LUZP6Q538Z0 58 aa4.14□□□□□ -1.75
MUC1-220ENST00000498431 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
MUC1-220ENST00000498431 KRTAP4-2Q9BYR5 136 aa4□□□□□ -1.77
MUC1-220ENST00000498431 LCE1BQ5T7P3 118 aa3.97□□□□□ -1.77
MUC1-220ENST00000498431 LCE1CQ5T751 118 aa3.84□□□□□ -1.79
MUC1-220ENST00000498431 NDUFAF8A1L188 74 aa3.72□□□□□ -1.81
MUC1-220ENST00000498431 LCE3DQ9BYE3 92 aa3.59□□□□□ -1.83
MUC1-220ENST00000498431 KRTAP5-11Q6L8G4 156 aa3.57□□□□□ -1.84
MUC1-220ENST00000498431 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
MUC1-220ENST00000498431 A0A0A0MQY5 61 aa3.48□□□□□ -1.85
MUC1-220ENST00000498431 LCE3EQ5T5B0 92 aa3.46□□□□□ -1.86
MUC1-220ENST00000498431 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.44□□□□□ -1.86
MUC1-220ENST00000498431 PHGR1C9JFL3 82 aa3.4□□□□□ -1.87
MUC1-220ENST00000498431 KRTAP21-2Q3LI59 83 aa3.2□□□□□ -1.9
MUC1-220ENST00000498431 INE1O15225 51 aa3.09□□□□□ -1.91
MUC1-220ENST00000498431 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
MUC1-220ENST00000498431 MUC19Q7Z5P9 8384 aa2.96□□□□□ -1.94
MUC1-220ENST00000498431 PRM1P04553 51 aa2.82□□□□□ -1.96
MUC1-220ENST00000498431 KRTAP21-1Q3LI58 79 aa2.56□□□□□ -2
MUC1-220ENST00000498431 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 79.9 ms