RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 KRTAP6-3Q3LI67 103 aa2.67□□□□□ -1.98
HMGXB4-208ENST00000498325 H1FX-AS1Q4G0G2 97 aa2.66□□□□□ -1.98
HMGXB4-208ENST00000498325 S4R3F8 94 aa2.64□□□□□ -1.99
HMGXB4-208ENST00000498325 CSAG1Q6PB30 78 aa2.61□□□□□ -1.99
HMGXB4-208ENST00000498325 ADM2Q7Z4H4 148 aa2.61□□□□□ -1.99
HMGXB4-208ENST00000498325 K7ERS5 55 aa2.6□□□□□ -1.99
HMGXB4-208ENST00000498325 KMT2DO14686 5537 aa2.59□□□□□ -2
HMGXB4-208ENST00000498325 KRTAP25-1Q3LHN0 102 aa2.58□□□□□ -2
HMGXB4-208ENST00000498325 A0A1B0GU33 70 aa2.57□□□□□ -2
HMGXB4-208ENST00000498325 M0R2T5 61 aa2.57□□□□□ -2
HMGXB4-208ENST00000498325 FLGP20930 4061 aaPredicted RBP2.57□□□□□ -2
HMGXB4-208ENST00000498325 H0YAA0 97 aa2.56□□□□□ -2
HMGXB4-208ENST00000498325 MDN1Q9NU22 5596 aa2.53□□□□□ -2
HMGXB4-208ENST00000498325 ROMO1P60602 79 aa2.52□□□□□ -2.01
HMGXB4-208ENST00000498325 KRTAP2-3P0C7H8 128 aa2.49□□□□□ -2.01
HMGXB4-208ENST00000498325 KRTAP19-6Q3LI70 58 aa2.49□□□□□ -2.01
HMGXB4-208ENST00000498325 KRTAP2-4Q9BYR9 128 aa2.49□□□□□ -2.01
HMGXB4-208ENST00000498325 P0C880 135 aa2.48□□□□□ -2.01
HMGXB4-208ENST00000498325 M0QZ58 72 aa2.47□□□□□ -2.01
HMGXB4-208ENST00000498325 R4GN34 69 aa2.45□□□□□ -2.02
HMGXB4-208ENST00000498325 CRIPTQ9P021 101 aa2.44□□□□□ -2.02
HMGXB4-208ENST00000498325 MT2AP02795 61 aa2.41□□□□□ -2.02
HMGXB4-208ENST00000498325 KRTAP13-4Q3LI77 160 aa2.41□□□□□ -2.02
HMGXB4-208ENST00000498325 A0A0D9SG42 100 aa2.4□□□□□ -2.03
HMGXB4-208ENST00000498325 MT1FP04733 61 aa2.4□□□□□ -2.03
HMGXB4-208ENST00000498325 SPINT4Q6UDR6 99 aa2.4□□□□□ -2.03
HMGXB4-208ENST00000498325 KRTAP2-1Q9BYU5 128 aa2.38□□□□□ -2.03
HMGXB4-208ENST00000498325 KRTAP10-10P60014 251 aa2.37□□□□□ -2.03
HMGXB4-208ENST00000498325 CAMK2N1Q7Z7J9 78 aa2.37□□□□□ -2.03
HMGXB4-208ENST00000498325 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
HMGXB4-208ENST00000498325 KRTAP12-1P59990 96 aa2.35□□□□□ -2.03
HMGXB4-208ENST00000498325 SPRR2GQ9BYE4 73 aa2.34□□□□□ -2.03
HMGXB4-208ENST00000498325 PP632Q6XCG6 107 aa2.33□□□□□ -2.04
HMGXB4-208ENST00000498325 PLAC4Q8WY50 150 aa2.31□□□□□ -2.04
HMGXB4-208ENST00000498325 DSTQ03001 7570 aaKnown RBP2.29□□□□□ -2.04
HMGXB4-208ENST00000498325 C10orf95Q9H7T3 257 aa2.29□□□□□ -2.04
HMGXB4-208ENST00000498325 AHNAK2Q8IVF2 5795 aa2.29□□□□□ -2.04
HMGXB4-208ENST00000498325 KRTAP19-8Q3LI54 63 aa2.27□□□□□ -2.05
HMGXB4-208ENST00000498325 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
HMGXB4-208ENST00000498325 SPRR2EP22531 72 aa2.25□□□□□ -2.05
HMGXB4-208ENST00000498325 SPRR2BP35325 72 aa2.25□□□□□ -2.05
HMGXB4-208ENST00000498325 SPRR2AP35326 72 aa2.25□□□□□ -2.05
HMGXB4-208ENST00000498325 LCE3DQ9BYE3 92 aa2.23□□□□□ -2.05
HMGXB4-208ENST00000498325 MT1BP07438 61 aa2.22□□□□□ -2.05
HMGXB4-208ENST00000498325 HMCN1Q96RW7 5635 aa2.21□□□□□ -2.06
HMGXB4-208ENST00000498325 TNP1P09430 55 aa2.2□□□□□ -2.06
HMGXB4-208ENST00000498325 LUZP6Q538Z0 58 aa2.2□□□□□ -2.06
HMGXB4-208ENST00000498325 PRO2289Q9P1D8 64 aa2.19□□□□□ -2.06
HMGXB4-208ENST00000498325 SPRR2DP22532 72 aa2.18□□□□□ -2.06
HMGXB4-208ENST00000498325 SPRR2FQ96RM1 72 aa2.17□□□□□ -2.06
HMGXB4-208ENST00000498325 MT1XP80297 61 aa2.14□□□□□ -2.07
HMGXB4-208ENST00000498325 KRTAP5-10Q6L8G5 202 aa2.14□□□□□ -2.07
HMGXB4-208ENST00000498325 SPRR5A0A1B0GTR4 108 aa2.09□□□□□ -2.07
HMGXB4-208ENST00000498325 AHNAKQ09666 5890 aaKnown RBP2.03□□□□□ -2.08
HMGXB4-208ENST00000498325 KRTAP8-1Q8IUC2 63 aa2.02□□□□□ -2.09
HMGXB4-208ENST00000498325 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
HMGXB4-208ENST00000498325 INE1O15225 51 aa1.98□□□□□ -2.09
HMGXB4-208ENST00000498325 KRTAP12-3P60328 96 aa1.98□□□□□ -2.09
HMGXB4-208ENST00000498325 MT4P47944 62 aa1.97□□□□□ -2.09
HMGXB4-208ENST00000498325 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.09
HMGXB4-208ENST00000498325 MUC5ACP98088 5654 aa1.95□□□□□ -2.1
HMGXB4-208ENST00000498325 KRTAP19-5Q3LI72 72 aa1.95□□□□□ -2.1
HMGXB4-208ENST00000498325 KRTAP19-7Q3SYF9 63 aa1.91□□□□□ -2.1
HMGXB4-208ENST00000498325 MT1EP04732 61 aa1.89□□□□□ -2.11
HMGXB4-208ENST00000498325 MT1LQ93083 61 aa1.85□□□□□ -2.11
HMGXB4-208ENST00000498325 MT1GP13640 62 aa1.84□□□□□ -2.11
HMGXB4-208ENST00000498325 KRTAP19-3Q7Z4W3 81 aa1.82□□□□□ -2.12
HMGXB4-208ENST00000498325 MT1MQ8N339 61 aa1.78□□□□□ -2.12
HMGXB4-208ENST00000498325 KRTAP20-2Q3LI61 65 aa1.72□□□□□ -2.13
HMGXB4-208ENST00000498325 SYNE1Q8NF91 8797 aaKnown RBP1.65□□□□□ -2.15
HMGXB4-208ENST00000498325 MT1AP04731 61 aa1.59□□□□□ -2.15
HMGXB4-208ENST00000498325 KRTAP6-1Q3LI64 71 aa1.55□□□□□ -2.16
HMGXB4-208ENST00000498325 KRTAP12-4P60329 112 aa1.53□□□□□ -2.16
HMGXB4-208ENST00000498325 KRTAP6-2Q3LI66 62 aa1.43□□□□□ -2.18
HMGXB4-208ENST00000498325 PRM1P04553 51 aa1.3□□□□□ -2.2
HMGXB4-208ENST00000498325 PHGR1C9JFL3 82 aa1.26□□□□□ -2.21
HMGXB4-208ENST00000498325 KRTAP21-1Q3LI58 79 aa0.94□□□□□ -2.26
HMGXB4-208ENST00000498325 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 97.1 ms