RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 KRTAP19-3Q7Z4W3 81 aa4.3□□□□□ -1.72
MRPL55-234ENST00000497758 LCE3BQ5TA77 95 aa4.29□□□□□ -1.72
MRPL55-234ENST00000497758 LCE5AQ5TCM9 118 aa4.27□□□□□ -1.73
MRPL55-234ENST00000497758 KRTAP25-1Q3LHN0 102 aa4.23□□□□□ -1.73
MRPL55-234ENST00000497758 PP632Q6XCG6 107 aa4.22□□□□□ -1.73
MRPL55-234ENST00000497758 MT1GP13640 62 aa4.21□□□□□ -1.74
MRPL55-234ENST00000497758 MT1LQ93083 61 aa4.18□□□□□ -1.74
MRPL55-234ENST00000497758 KRTAP12-3P60328 96 aa4.16□□□□□ -1.74
MRPL55-234ENST00000497758 DSTQ03001 7570 aaKnown RBP4.14□□□□□ -1.75
MRPL55-234ENST00000497758 MT1MQ8N339 61 aa4.14□□□□□ -1.75
MRPL55-234ENST00000497758 CDC42SE1Q9NRR8 79 aa4.14□□□□□ -1.75
MRPL55-234ENST00000497758 KRTAP23-1A1A580 65 aa4.06□□□□□ -1.76
MRPL55-234ENST00000497758 ROMO1P60602 79 aa4.06□□□□□ -1.76
MRPL55-234ENST00000497758 KRTAP4-3Q9BYR4 195 aa4.02□□□□□ -1.77
MRPL55-234ENST00000497758 KRTAP4-9Q9BYQ8 210 aa4□□□□□ -1.77
MRPL55-234ENST00000497758 KRTAP4-7Q9BYR0 210 aa3.97□□□□□ -1.77
MRPL55-234ENST00000497758 KRTAP19-4Q3LI73 84 aa3.93□□□□□ -1.78
MRPL55-234ENST00000497758 KRTAP15-1Q3LI76 137 aa3.93□□□□□ -1.78
MRPL55-234ENST00000497758 LCE4AQ5TA78 99 aa3.92□□□□□ -1.78
MRPL55-234ENST00000497758 SPRR5A0A1B0GTR4 108 aa3.9□□□□□ -1.79
MRPL55-234ENST00000497758 HMCN1Q96RW7 5635 aa3.87□□□□□ -1.79
MRPL55-234ENST00000497758 MT4P47944 62 aa3.87□□□□□ -1.79
MRPL55-234ENST00000497758 LCE1DQ5T752 114 aa3.87□□□□□ -1.79
MRPL55-234ENST00000497758 BRK1Q8WUW1 75 aa3.85□□□□□ -1.79
MRPL55-234ENST00000497758 LCE3CQ5T5A8 94 aa3.84□□□□□ -1.79
MRPL55-234ENST00000497758 KRTAP5-10Q6L8G5 202 aa3.84□□□□□ -1.79
MRPL55-234ENST00000497758 KRTAP5-4Q6L8H1 288 aa3.84□□□□□ -1.79
MRPL55-234ENST00000497758 AHNAK2Q8IVF2 5795 aa3.83□□□□□ -1.8
MRPL55-234ENST00000497758 KRTAP5-7Q6L8G8 165 aa3.78□□□□□ -1.8
MRPL55-234ENST00000497758 LOC100996750A0A140TA64 210 aa3.76□□□□□ -1.81
MRPL55-234ENST00000497758 KRTAP5-5Q701N2 237 aaPredicted RBP3.76□□□□□ -1.81
MRPL55-234ENST00000497758 KRTAP4-6Q9BYQ5 205 aa3.74□□□□□ -1.81
MRPL55-234ENST00000497758 KRTAP12-4P60329 112 aa3.68□□□□□ -1.82
MRPL55-234ENST00000497758 SVIPQ8NHG7 77 aa3.67□□□□□ -1.82
MRPL55-234ENST00000497758 KRTAP5-3Q6L8H2 238 aa3.65□□□□□ -1.83
MRPL55-234ENST00000497758 PMAIP1Q13794 54 aa3.63□□□□□ -1.83
MRPL55-234ENST00000497758 KRTAP20-2Q3LI61 65 aa3.63□□□□□ -1.83
MRPL55-234ENST00000497758 KRTAP9-6A8MVA2 160 aa3.58□□□□□ -1.84
MRPL55-234ENST00000497758 SYNE1Q8NF91 8797 aaKnown RBP3.57□□□□□ -1.84
MRPL55-234ENST00000497758 MT1AP04731 61 aa3.57□□□□□ -1.84
MRPL55-234ENST00000497758 KRTAP6-1Q3LI64 71 aa3.53□□□□□ -1.84
MRPL55-234ENST00000497758 PRO0628Q9UI54 55 aa3.45□□□□□ -1.86
MRPL55-234ENST00000497758 PRAC1Q96KF2 57 aa3.44□□□□□ -1.86
MRPL55-234ENST00000497758 KRTAP9-4Q9BYQ2 154 aa3.43□□□□□ -1.86
MRPL55-234ENST00000497758 AHNAKQ09666 5890 aaKnown RBP3.43□□□□□ -1.86
MRPL55-234ENST00000497758 KRTAP5-2Q701N4 177 aa3.39□□□□□ -1.87
MRPL55-234ENST00000497758 KRTAP6-2Q3LI66 62 aa3.36□□□□□ -1.87
MRPL55-234ENST00000497758 MUC5ACP98088 5654 aa3.29□□□□□ -1.88
MRPL55-234ENST00000497758 KRTAP4-11Q9BYQ6 195 aa3.29□□□□□ -1.88
MRPL55-234ENST00000497758 KTN1-AS1Q86SY8 53 aa3.28□□□□□ -1.88
MRPL55-234ENST00000497758 MT3P25713 68 aa3.27□□□□□ -1.89
MRPL55-234ENST00000497758 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
MRPL55-234ENST00000497758 KRTAP5-8O75690 187 aa3.16□□□□□ -1.9
MRPL55-234ENST00000497758 OBSCNQ5VST9 7968 aa3.14□□□□□ -1.91
MRPL55-234ENST00000497758 KRTAP9-9Q9BYP9 154 aa3.1□□□□□ -1.91
MRPL55-234ENST00000497758 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
MRPL55-234ENST00000497758 LUZP6Q538Z0 58 aa2.95□□□□□ -1.94
MRPL55-234ENST00000497758 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
MRPL55-234ENST00000497758 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
MRPL55-234ENST00000497758 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
MRPL55-234ENST00000497758 H3BS24 57 aa2.79□□□□□ -1.96
MRPL55-234ENST00000497758 KRTAP4-12Q9BQ66 201 aa2.77□□□□□ -1.97
MRPL55-234ENST00000497758 KRTAP4-2Q9BYR5 136 aa2.76□□□□□ -1.97
MRPL55-234ENST00000497758 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
MRPL55-234ENST00000497758 A0A0A0MQY5 61 aa2.72□□□□□ -1.97
MRPL55-234ENST00000497758 LCE3EQ5T5B0 92 aa2.66□□□□□ -1.98
MRPL55-234ENST00000497758 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
MRPL55-234ENST00000497758 KRTAP5-11Q6L8G4 156 aa2.47□□□□□ -2.01
MRPL55-234ENST00000497758 NDUFAF8A1L188 74 aa2.45□□□□□ -2.02
MRPL55-234ENST00000497758 LCE1FQ5T754 118 aa2.37□□□□□ -2.03
MRPL55-234ENST00000497758 PHGR1C9JFL3 82 aa2.31□□□□□ -2.04
MRPL55-234ENST00000497758 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
MRPL55-234ENST00000497758 KRTAP4-4Q9BYR3 166 aa2.12□□□□□ -2.07
MRPL55-234ENST00000497758 PRM1P04553 51 aa2.08□□□□□ -2.08
MRPL55-234ENST00000497758 INE1O15225 51 aa1.99□□□□□ -2.09
MRPL55-234ENST00000497758 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
MRPL55-234ENST00000497758 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
MRPL55-234ENST00000497758 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms