RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 A0A0D9SG42 100 aa4.08□□□□□ -1.76
SHROOM3-210ENST00000497440 MT1EP04732 61 aa4.08□□□□□ -1.76
SHROOM3-210ENST00000497440 SMIM26A0A096LP01 95 aa4.07□□□□□ -1.76
SHROOM3-210ENST00000497440 PRO0628Q9UI54 55 aa4.07□□□□□ -1.76
SHROOM3-210ENST00000497440 A0A1B0GU69 56 aa4.04□□□□□ -1.76
SHROOM3-210ENST00000497440 SPINT4Q6UDR6 99 aa4.03□□□□□ -1.76
SHROOM3-210ENST00000497440 KRTAP19-3Q7Z4W3 81 aa4.03□□□□□ -1.76
SHROOM3-210ENST00000497440 A8MU10 97 aa3.99□□□□□ -1.77
SHROOM3-210ENST00000497440 PRR15LQ9BU68 103 aa3.99□□□□□ -1.77
SHROOM3-210ENST00000497440 LINC01558Q9Y6Z2 57 aa3.98□□□□□ -1.77
SHROOM3-210ENST00000497440 KRTAP19-5Q3LI72 72 aa3.97□□□□□ -1.77
SHROOM3-210ENST00000497440 MT1GP13640 62 aa3.96□□□□□ -1.78
SHROOM3-210ENST00000497440 C10orf95Q9H7T3 257 aa3.96□□□□□ -1.78
SHROOM3-210ENST00000497440 BRK1Q8WUW1 75 aa3.94□□□□□ -1.78
SHROOM3-210ENST00000497440 V9GYY9 64 aa3.94□□□□□ -1.78
SHROOM3-210ENST00000497440 Q1T7F1 81 aa3.9□□□□□ -1.79
SHROOM3-210ENST00000497440 MT1LQ93083 61 aa3.89□□□□□ -1.79
SHROOM3-210ENST00000497440 TNP1P09430 55 aa3.88□□□□□ -1.79
SHROOM3-210ENST00000497440 LCE3AQ5TA76 89 aa3.87□□□□□ -1.79
SHROOM3-210ENST00000497440 MT1MQ8N339 61 aa3.87□□□□□ -1.79
SHROOM3-210ENST00000497440 UQCR11O14957 56 aa3.86□□□□□ -1.79
SHROOM3-210ENST00000497440 PP632Q6XCG6 107 aa3.85□□□□□ -1.79
SHROOM3-210ENST00000497440 PRAC1Q96KF2 57 aa3.84□□□□□ -1.79
SHROOM3-210ENST00000497440 PMAIP1Q13794 54 aa3.83□□□□□ -1.8
SHROOM3-210ENST00000497440 PSPHP1O15172 72 aa3.82□□□□□ -1.8
SHROOM3-210ENST00000497440 HMCN1Q96RW7 5635 aa3.8□□□□□ -1.8
SHROOM3-210ENST00000497440 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.8□□□□□ -1.8
SHROOM3-210ENST00000497440 MIR22HGQ0VDD5 57 aa3.77□□□□□ -1.81
SHROOM3-210ENST00000497440 GPR98Q8WXG9 6306 aa3.77□□□□□ -1.81
SHROOM3-210ENST00000497440 KRTAP5-4Q6L8H1 288 aa3.76□□□□□ -1.81
SHROOM3-210ENST00000497440 KRTAP12-3P60328 96 aa3.74□□□□□ -1.81
SHROOM3-210ENST00000497440 KRTAP4-3Q9BYR4 195 aa3.74□□□□□ -1.81
SHROOM3-210ENST00000497440 A6NED7 52 aa3.73□□□□□ -1.81
SHROOM3-210ENST00000497440 KTN1-AS1Q86SY8 53 aa3.72□□□□□ -1.81
SHROOM3-210ENST00000497440 KRTAP25-1Q3LHN0 102 aa3.7□□□□□ -1.82
SHROOM3-210ENST00000497440 K7ERS5 55 aa3.69□□□□□ -1.82
SHROOM3-210ENST00000497440 CDC42SE1Q9NRR8 79 aa3.67□□□□□ -1.82
SHROOM3-210ENST00000497440 AHNAK2Q8IVF2 5795 aa3.63□□□□□ -1.83
SHROOM3-210ENST00000497440 KRTAP5-5Q701N2 237 aaPredicted RBP3.62□□□□□ -1.83
SHROOM3-210ENST00000497440 MT4P47944 62 aa3.61□□□□□ -1.83
SHROOM3-210ENST00000497440 SYNE1Q8NF91 8797 aaKnown RBP3.6□□□□□ -1.83
SHROOM3-210ENST00000497440 KRTAP15-1Q3LI76 137 aa3.58□□□□□ -1.84
SHROOM3-210ENST00000497440 SPRR5A0A1B0GTR4 108 aa3.5□□□□□ -1.85
SHROOM3-210ENST00000497440 KRTAP5-11Q6L8G4 156 aa3.5□□□□□ -1.85
SHROOM3-210ENST00000497440 KRTAP5-10Q6L8G5 202 aa3.5□□□□□ -1.85
SHROOM3-210ENST00000497440 KRTAP20-2Q3LI61 65 aa3.48□□□□□ -1.85
SHROOM3-210ENST00000497440 ROMO1P60602 79 aa3.46□□□□□ -1.86
SHROOM3-210ENST00000497440 LCE3CQ5T5A8 94 aa3.46□□□□□ -1.86
SHROOM3-210ENST00000497440 KRTAP12-4P60329 112 aa3.41□□□□□ -1.86
SHROOM3-210ENST00000497440 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
SHROOM3-210ENST00000497440 KRTAP5-7Q6L8G8 165 aa3.36□□□□□ -1.87
SHROOM3-210ENST00000497440 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
SHROOM3-210ENST00000497440 MT1AP04731 61 aa3.31□□□□□ -1.88
SHROOM3-210ENST00000497440 KRTAP5-2Q701N4 177 aa3.31□□□□□ -1.88
SHROOM3-210ENST00000497440 KRTAP6-1Q3LI64 71 aa3.28□□□□□ -1.88
SHROOM3-210ENST00000497440 LUZP6Q538Z0 58 aa3.23□□□□□ -1.89
SHROOM3-210ENST00000497440 KRTAP5-1Q6L8H4 278 aa3.21□□□□□ -1.9
SHROOM3-210ENST00000497440 LCE1EQ5T753 118 aa3.15□□□□□ -1.91
SHROOM3-210ENST00000497440 OBSCNQ5VST9 7968 aa3.15□□□□□ -1.91
SHROOM3-210ENST00000497440 KRTAP4-4Q9BYR3 166 aa3.12□□□□□ -1.91
SHROOM3-210ENST00000497440 KRTAP6-2Q3LI66 62 aa3.11□□□□□ -1.91
SHROOM3-210ENST00000497440 KRTAP5-8O75690 187 aa3.1□□□□□ -1.91
SHROOM3-210ENST00000497440 MUC5BQ9HC84 5762 aaPredicted RBP3.03□□□□□ -1.92
SHROOM3-210ENST00000497440 MT3P25713 68 aa3.01□□□□□ -1.93
SHROOM3-210ENST00000497440 MUC5ACP98088 5654 aa3□□□□□ -1.93
SHROOM3-210ENST00000497440 AHNAKQ09666 5890 aaKnown RBP2.98□□□□□ -1.93
SHROOM3-210ENST00000497440 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
SHROOM3-210ENST00000497440 LCE1CQ5T751 118 aa2.63□□□□□ -1.99
SHROOM3-210ENST00000497440 LCE1BQ5T7P3 118 aa2.63□□□□□ -1.99
SHROOM3-210ENST00000497440 INE1O15225 51 aa2.49□□□□□ -2.01
SHROOM3-210ENST00000497440 LCE3DQ9BYE3 92 aa2.48□□□□□ -2.01
SHROOM3-210ENST00000497440 LCE3EQ5T5B0 92 aa2.33□□□□□ -2.04
SHROOM3-210ENST00000497440 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
SHROOM3-210ENST00000497440 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
SHROOM3-210ENST00000497440 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
SHROOM3-210ENST00000497440 PRM1P04553 51 aa1.76□□□□□ -2.13
SHROOM3-210ENST00000497440 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
SHROOM3-210ENST00000497440 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 74.1 ms