RNA–Protein interactions for RNA: ENST00000497049.5

SIK3-213, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-213ENST00000497049 MACF1Q9UPN3 7388 aaKnown RBP3□□□□□ -1.93
SIK3-213ENST00000497049 M0QZ58 72 aa2.97□□□□□ -1.93
SIK3-213ENST00000497049 KRTAP13-4Q3LI77 160 aa2.96□□□□□ -1.94
SIK3-213ENST00000497049 KRTAP12-1P59990 96 aa2.94□□□□□ -1.94
SIK3-213ENST00000497049 MT2AP02795 61 aa2.92□□□□□ -1.94
SIK3-213ENST00000497049 KRTAP10-10P60014 251 aa2.92□□□□□ -1.94
SIK3-213ENST00000497049 MT1FP04733 61 aa2.9□□□□□ -1.95
SIK3-213ENST00000497049 KRTAP12-2P59991 146 aa2.9□□□□□ -1.95
SIK3-213ENST00000497049 LUZP6Q538Z0 58 aa2.9□□□□□ -1.95
SIK3-213ENST00000497049 C10orf95Q9H7T3 257 aa2.9□□□□□ -1.95
SIK3-213ENST00000497049 A0A0D9SG42 100 aa2.89□□□□□ -1.95
SIK3-213ENST00000497049 SPRR5A0A1B0GTR4 108 aa2.89□□□□□ -1.95
SIK3-213ENST00000497049 PP632Q6XCG6 107 aa2.89□□□□□ -1.95
SIK3-213ENST00000497049 AHNAK2Q8IVF2 5795 aa2.89□□□□□ -1.95
SIK3-213ENST00000497049 PLAC4Q8WY50 150 aa2.85□□□□□ -1.95
SIK3-213ENST00000497049 SPRR2GQ9BYE4 73 aa2.84□□□□□ -1.95
SIK3-213ENST00000497049 R4GN34 69 aa2.81□□□□□ -1.96
SIK3-213ENST00000497049 KRTAP19-8Q3LI54 63 aa2.79□□□□□ -1.96
SIK3-213ENST00000497049 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
SIK3-213ENST00000497049 KMT2DO14686 5537 aa2.77□□□□□ -1.97
SIK3-213ENST00000497049 CAMK2N1Q7Z7J9 78 aa2.75□□□□□ -1.97
SIK3-213ENST00000497049 OBSCNQ5VST9 7968 aa2.74□□□□□ -1.97
SIK3-213ENST00000497049 MT1BP07438 61 aa2.73□□□□□ -1.97
SIK3-213ENST00000497049 KRTAP4-3Q9BYR4 195 aa2.72□□□□□ -1.97
SIK3-213ENST00000497049 USH2AO75445 5202 aa2.68□□□□□ -1.98
SIK3-213ENST00000497049 AHNAKQ09666 5890 aaKnown RBP2.68□□□□□ -1.98
SIK3-213ENST00000497049 KRTAP19-6Q3LI70 58 aa2.67□□□□□ -1.98
SIK3-213ENST00000497049 KRTAP5-2Q701N4 177 aa2.67□□□□□ -1.98
SIK3-213ENST00000497049 PRO2289Q9P1D8 64 aa2.67□□□□□ -1.98
SIK3-213ENST00000497049 INE1O15225 51 aa2.65□□□□□ -1.99
SIK3-213ENST00000497049 KRTAP2-3P0C7H8 128 aa2.65□□□□□ -1.99
SIK3-213ENST00000497049 KRTAP2-4Q9BYR9 128 aa2.65□□□□□ -1.99
SIK3-213ENST00000497049 TNP1P09430 55 aa2.62□□□□□ -1.99
SIK3-213ENST00000497049 KRTAP6-3Q3LI67 103 aa2.62□□□□□ -1.99
SIK3-213ENST00000497049 LCE3AQ5TA76 89 aa2.62□□□□□ -1.99
SIK3-213ENST00000497049 FCGBPQ9Y6R7 5405 aaPredicted RBP2.62□□□□□ -1.99
SIK3-213ENST00000497049 MT1XP80297 61 aa2.61□□□□□ -1.99
SIK3-213ENST00000497049 KRTAP5-7Q6L8G8 165 aa2.57□□□□□ -2
SIK3-213ENST00000497049 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
SIK3-213ENST00000497049 MUC12Q9UKN1 5478 aa2.51□□□□□ -2.01
SIK3-213ENST00000497049 KRTAP5-10Q6L8G5 202 aa2.48□□□□□ -2.01
SIK3-213ENST00000497049 KRTAP2-1Q9BYU5 128 aa2.48□□□□□ -2.01
SIK3-213ENST00000497049 DSTQ03001 7570 aaKnown RBP2.47□□□□□ -2.01
SIK3-213ENST00000497049 KRTAP8-1Q8IUC2 63 aa2.42□□□□□ -2.02
SIK3-213ENST00000497049 KRTAP5-5Q701N2 237 aaPredicted RBP2.39□□□□□ -2.03
SIK3-213ENST00000497049 KRTAP19-7Q3SYF9 63 aa2.34□□□□□ -2.03
SIK3-213ENST00000497049 KRTAP19-5Q3LI72 72 aa2.33□□□□□ -2.04
SIK3-213ENST00000497049 MDN1Q9NU22 5596 aa2.32□□□□□ -2.04
SIK3-213ENST00000497049 SPRR2FQ96RM1 72 aa2.32□□□□□ -2.04
SIK3-213ENST00000497049 KRTAP12-3P60328 96 aa2.31□□□□□ -2.04
SIK3-213ENST00000497049 MT1EP04732 61 aa2.3□□□□□ -2.04
SIK3-213ENST00000497049 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
SIK3-213ENST00000497049 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
SIK3-213ENST00000497049 MUC5ACP98088 5654 aa2.3□□□□□ -2.04
SIK3-213ENST00000497049 LCE3DQ9BYE3 92 aa2.28□□□□□ -2.04
SIK3-213ENST00000497049 HMCN1Q96RW7 5635 aa2.27□□□□□ -2.05
SIK3-213ENST00000497049 MT1GP13640 62 aa2.25□□□□□ -2.05
SIK3-213ENST00000497049 KRTAP5-8O75690 187 aa2.24□□□□□ -2.05
SIK3-213ENST00000497049 SPRR2EP22531 72 aa2.24□□□□□ -2.05
SIK3-213ENST00000497049 SPRR2BP35325 72 aa2.24□□□□□ -2.05
SIK3-213ENST00000497049 SPRR2AP35326 72 aa2.24□□□□□ -2.05
SIK3-213ENST00000497049 KRTAP19-3Q7Z4W3 81 aa2.24□□□□□ -2.05
SIK3-213ENST00000497049 MT1LQ93083 61 aa2.24□□□□□ -2.05
SIK3-213ENST00000497049 SPRR2DP22532 72 aa2.16□□□□□ -2.06
SIK3-213ENST00000497049 MT1MQ8N339 61 aa2.16□□□□□ -2.06
SIK3-213ENST00000497049 MT1AP04731 61 aa1.9□□□□□ -2.11
SIK3-213ENST00000497049 KRTAP12-4P60329 112 aa1.89□□□□□ -2.11
SIK3-213ENST00000497049 KRTAP6-1Q3LI64 71 aa1.88□□□□□ -2.11
SIK3-213ENST00000497049 MT4P47944 62 aa1.86□□□□□ -2.11
SIK3-213ENST00000497049 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
SIK3-213ENST00000497049 SYNE1Q8NF91 8797 aaKnown RBP1.83□□□□□ -2.12
SIK3-213ENST00000497049 KRTAP20-2Q3LI61 65 aa1.82□□□□□ -2.12
SIK3-213ENST00000497049 KRTAP6-2Q3LI66 62 aa1.75□□□□□ -2.13
SIK3-213ENST00000497049 PRM1P04553 51 aa1.65□□□□□ -2.15
SIK3-213ENST00000497049 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
SIK3-213ENST00000497049 PHGR1C9JFL3 82 aa1.55□□□□□ -2.16
SIK3-213ENST00000497049 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
SIK3-213ENST00000497049 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 33.8 ms