RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 LCE3BQ5TA77 95 aa7.02□□□□□ -1.29
CTDSP1-213ENST00000496785 LCE5AQ5TCM9 118 aa7.02□□□□□ -1.29
CTDSP1-213ENST00000496785 KRTAP25-1Q3LHN0 102 aa6.99□□□□□ -1.29
CTDSP1-213ENST00000496785 PP632Q6XCG6 107 aa6.95□□□□□ -1.3
CTDSP1-213ENST00000496785 MT1GP13640 62 aa6.94□□□□□ -1.3
CTDSP1-213ENST00000496785 MT1LQ93083 61 aa6.87□□□□□ -1.31
CTDSP1-213ENST00000496785 KRTAP12-3P60328 96 aa6.82□□□□□ -1.32
CTDSP1-213ENST00000496785 CDC42SE1Q9NRR8 79 aa6.82□□□□□ -1.32
CTDSP1-213ENST00000496785 MT1MQ8N339 61 aa6.78□□□□□ -1.32
CTDSP1-213ENST00000496785 DSTQ03001 7570 aaKnown RBP6.75□□□□□ -1.33
CTDSP1-213ENST00000496785 KRTAP23-1A1A580 65 aa6.75□□□□□ -1.33
CTDSP1-213ENST00000496785 GPR98Q8WXG9 6306 aa6.72□□□□□ -1.33
CTDSP1-213ENST00000496785 ROMO1P60602 79 aa6.69□□□□□ -1.34
CTDSP1-213ENST00000496785 KRTAP19-4Q3LI73 84 aa6.57□□□□□ -1.36
CTDSP1-213ENST00000496785 KRTAP4-3Q9BYR4 195 aa6.54□□□□□ -1.36
CTDSP1-213ENST00000496785 KRTAP15-1Q3LI76 137 aa6.48□□□□□ -1.37
CTDSP1-213ENST00000496785 KRTAP4-7Q9BYR0 210 aa6.47□□□□□ -1.37
CTDSP1-213ENST00000496785 LCE4AQ5TA78 99 aa6.45□□□□□ -1.38
CTDSP1-213ENST00000496785 KRTAP4-9Q9BYQ8 210 aa6.39□□□□□ -1.39
CTDSP1-213ENST00000496785 BRK1Q8WUW1 75 aa6.33□□□□□ -1.4
CTDSP1-213ENST00000496785 LCE1DQ5T752 114 aa6.32□□□□□ -1.4
CTDSP1-213ENST00000496785 KRTAP5-4Q6L8H1 288 aa6.32□□□□□ -1.4
CTDSP1-213ENST00000496785 LCE3CQ5T5A8 94 aa6.3□□□□□ -1.4
CTDSP1-213ENST00000496785 MT4P47944 62 aa6.28□□□□□ -1.4
CTDSP1-213ENST00000496785 HMCN1Q96RW7 5635 aa6.18□□□□□ -1.42
CTDSP1-213ENST00000496785 KRTAP5-5Q701N2 237 aaPredicted RBP6.17□□□□□ -1.42
CTDSP1-213ENST00000496785 LOC100996750A0A140TA64 210 aa6.11□□□□□ -1.43
CTDSP1-213ENST00000496785 KRTAP4-6Q9BYQ5 205 aa6.09□□□□□ -1.43
CTDSP1-213ENST00000496785 KRTAP12-4P60329 112 aa6.04□□□□□ -1.44
CTDSP1-213ENST00000496785 SPRR5A0A1B0GTR4 108 aa6□□□□□ -1.45
CTDSP1-213ENST00000496785 PMAIP1Q13794 54 aa5.97□□□□□ -1.45
CTDSP1-213ENST00000496785 KRTAP20-2Q3LI61 65 aa5.95□□□□□ -1.46
CTDSP1-213ENST00000496785 AHNAK2Q8IVF2 5795 aa5.92□□□□□ -1.46
CTDSP1-213ENST00000496785 SYNE1Q8NF91 8797 aaKnown RBP5.87□□□□□ -1.47
CTDSP1-213ENST00000496785 MT1AP04731 61 aa5.87□□□□□ -1.47
CTDSP1-213ENST00000496785 KRTAP9-6A8MVA2 160 aa5.85□□□□□ -1.47
CTDSP1-213ENST00000496785 KRTAP5-10Q6L8G5 202 aa5.82□□□□□ -1.48
CTDSP1-213ENST00000496785 KRTAP6-1Q3LI64 71 aa5.77□□□□□ -1.49
CTDSP1-213ENST00000496785 KRTAP5-3Q6L8H2 238 aa5.75□□□□□ -1.49
CTDSP1-213ENST00000496785 PRO0628Q9UI54 55 aa5.73□□□□□ -1.49
CTDSP1-213ENST00000496785 KRTAP5-7Q6L8G8 165 aa5.71□□□□□ -1.5
CTDSP1-213ENST00000496785 KRTAP9-4Q9BYQ2 154 aa5.63□□□□□ -1.51
CTDSP1-213ENST00000496785 PRAC1Q96KF2 57 aa5.62□□□□□ -1.51
CTDSP1-213ENST00000496785 KRTAP5-2Q701N4 177 aa5.58□□□□□ -1.52
CTDSP1-213ENST00000496785 KRTAP6-2Q3LI66 62 aa5.47□□□□□ -1.53
CTDSP1-213ENST00000496785 KTN1-AS1Q86SY8 53 aa5.44□□□□□ -1.54
CTDSP1-213ENST00000496785 MT3P25713 68 aa5.39□□□□□ -1.55
CTDSP1-213ENST00000496785 KRTAP4-11Q9BYQ6 195 aa5.38□□□□□ -1.55
CTDSP1-213ENST00000496785 SVIPQ8NHG7 77 aa5.21□□□□□ -1.58
CTDSP1-213ENST00000496785 KRTAP5-8O75690 187 aa5.17□□□□□ -1.58
CTDSP1-213ENST00000496785 OBSCNQ5VST9 7968 aa5.17□□□□□ -1.58
CTDSP1-213ENST00000496785 AHNAKQ09666 5890 aaKnown RBP5.15□□□□□ -1.58
CTDSP1-213ENST00000496785 MUC5ACP98088 5654 aa5.06□□□□□ -1.6
CTDSP1-213ENST00000496785 MUC5BQ9HC84 5762 aaPredicted RBP4.99□□□□□ -1.61
CTDSP1-213ENST00000496785 KRTAP5-1Q6L8H4 278 aa4.94□□□□□ -1.62
CTDSP1-213ENST00000496785 KRTAP9-9Q9BYP9 154 aa4.92□□□□□ -1.62
CTDSP1-213ENST00000496785 LCE1EQ5T753 118 aa4.89□□□□□ -1.63
CTDSP1-213ENST00000496785 LUZP6Q538Z0 58 aa4.87□□□□□ -1.63
CTDSP1-213ENST00000496785 LCE3DQ9BYE3 92 aa4.62□□□□□ -1.67
CTDSP1-213ENST00000496785 LCE1BQ5T7P3 118 aa4.55□□□□□ -1.68
CTDSP1-213ENST00000496785 KRTAP4-2Q9BYR5 136 aa4.53□□□□□ -1.68
CTDSP1-213ENST00000496785 LCE1CQ5T751 118 aa4.52□□□□□ -1.69
CTDSP1-213ENST00000496785 LCE3EQ5T5B0 92 aa4.39□□□□□ -1.71
CTDSP1-213ENST00000496785 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.14□□□□□ -1.75
CTDSP1-213ENST00000496785 KRTAP5-11Q6L8G4 156 aa4.08□□□□□ -1.76
CTDSP1-213ENST00000496785 NDUFAF8A1L188 74 aa4.04□□□□□ -1.76
CTDSP1-213ENST00000496785 KRTAP4-12Q9BQ66 201 aa3.98□□□□□ -1.77
CTDSP1-213ENST00000496785 LCE1FQ5T754 118 aa3.94□□□□□ -1.78
CTDSP1-213ENST00000496785 KRTAP21-2Q3LI59 83 aa3.79□□□□□ -1.8
CTDSP1-213ENST00000496785 H3BS24 57 aa3.69□□□□□ -1.82
CTDSP1-213ENST00000496785 A0A0A0MQY5 61 aa3.52□□□□□ -1.85
CTDSP1-213ENST00000496785 PHGR1C9JFL3 82 aa3.49□□□□□ -1.85
CTDSP1-213ENST00000496785 PRM1P04553 51 aa3.4□□□□□ -1.87
CTDSP1-213ENST00000496785 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.87
CTDSP1-213ENST00000496785 INE1O15225 51 aa3.34□□□□□ -1.87
CTDSP1-213ENST00000496785 MUC19Q7Z5P9 8384 aa3.14□□□□□ -1.91
CTDSP1-213ENST00000496785 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
CTDSP1-213ENST00000496785 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 135.6 ms