RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 SMIM26A0A096LP01 95 aa4.59□□□□□ -1.67
CLDN12-213ENST00000496677 KRTAP12-1P59990 96 aa4.59□□□□□ -1.67
CLDN12-213ENST00000496677 KRTAP19-3Q7Z4W3 81 aa4.58□□□□□ -1.68
CLDN12-213ENST00000496677 SPINT4Q6UDR6 99 aa4.55□□□□□ -1.68
CLDN12-213ENST00000496677 KRTAP19-5Q3LI72 72 aa4.52□□□□□ -1.69
CLDN12-213ENST00000496677 Q1T7F1 81 aa4.51□□□□□ -1.69
CLDN12-213ENST00000496677 V9GYY9 64 aa4.51□□□□□ -1.69
CLDN12-213ENST00000496677 MT1GP13640 62 aa4.48□□□□□ -1.69
CLDN12-213ENST00000496677 LINC01558Q9Y6Z2 57 aa4.47□□□□□ -1.69
CLDN12-213ENST00000496677 A0A1B0GU69 56 aa4.46□□□□□ -1.7
CLDN12-213ENST00000496677 A8MU10 97 aa4.45□□□□□ -1.7
CLDN12-213ENST00000496677 DSTQ03001 7570 aaKnown RBP4.44□□□□□ -1.7
CLDN12-213ENST00000496677 MT1LQ93083 61 aa4.41□□□□□ -1.7
CLDN12-213ENST00000496677 C10orf95Q9H7T3 257 aa4.41□□□□□ -1.7
CLDN12-213ENST00000496677 MT1MQ8N339 61 aa4.4□□□□□ -1.71
CLDN12-213ENST00000496677 PRR15LQ9BU68 103 aa4.4□□□□□ -1.71
CLDN12-213ENST00000496677 PSPHP1O15172 72 aa4.38□□□□□ -1.71
CLDN12-213ENST00000496677 LCE3AQ5TA76 89 aa4.38□□□□□ -1.71
CLDN12-213ENST00000496677 PP632Q6XCG6 107 aa4.38□□□□□ -1.71
CLDN12-213ENST00000496677 GPR98Q8WXG9 6306 aa4.35□□□□□ -1.71
CLDN12-213ENST00000496677 TNP1P09430 55 aa4.34□□□□□ -1.71
CLDN12-213ENST00000496677 MT3P25713 68 aa4.31□□□□□ -1.72
CLDN12-213ENST00000496677 KRTAP4-3Q9BYR4 195 aa4.31□□□□□ -1.72
CLDN12-213ENST00000496677 KRTAP5-4Q6L8H1 288 aa4.27□□□□□ -1.73
CLDN12-213ENST00000496677 A6NED7 52 aa4.26□□□□□ -1.73
CLDN12-213ENST00000496677 UQCR11O14957 56 aa4.25□□□□□ -1.73
CLDN12-213ENST00000496677 MT4P47944 62 aa4.24□□□□□ -1.73
CLDN12-213ENST00000496677 PRO0628Q9UI54 55 aa4.23□□□□□ -1.73
CLDN12-213ENST00000496677 CDC42SE1Q9NRR8 79 aa4.22□□□□□ -1.73
CLDN12-213ENST00000496677 HMCN1Q96RW7 5635 aa4.21□□□□□ -1.73
CLDN12-213ENST00000496677 BRK1Q8WUW1 75 aa4.21□□□□□ -1.74
CLDN12-213ENST00000496677 KRTAP12-3P60328 96 aa4.2□□□□□ -1.74
CLDN12-213ENST00000496677 LCE1EQ5T753 118 aa4.2□□□□□ -1.74
CLDN12-213ENST00000496677 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.2□□□□□ -1.74
CLDN12-213ENST00000496677 MIR22HGQ0VDD5 57 aa4.19□□□□□ -1.74
CLDN12-213ENST00000496677 KRTAP5-11Q6L8G4 156 aa4.17□□□□□ -1.74
CLDN12-213ENST00000496677 KRTAP25-1Q3LHN0 102 aa4.08□□□□□ -1.76
CLDN12-213ENST00000496677 KRTAP5-5Q701N2 237 aaPredicted RBP4.08□□□□□ -1.76
CLDN12-213ENST00000496677 KRTAP5-10Q6L8G5 202 aa4.07□□□□□ -1.76
CLDN12-213ENST00000496677 AHNAK2Q8IVF2 5795 aa4.05□□□□□ -1.76
CLDN12-213ENST00000496677 K7ERS5 55 aa4.02□□□□□ -1.77
CLDN12-213ENST00000496677 KRTAP20-2Q3LI61 65 aa4□□□□□ -1.77
CLDN12-213ENST00000496677 PMAIP1Q13794 54 aa3.99□□□□□ -1.77
CLDN12-213ENST00000496677 SPRR5A0A1B0GTR4 108 aa3.98□□□□□ -1.77
CLDN12-213ENST00000496677 KRTAP12-4P60329 112 aa3.92□□□□□ -1.78
CLDN12-213ENST00000496677 KRTAP5-7Q6L8G8 165 aa3.92□□□□□ -1.78
CLDN12-213ENST00000496677 LCE3CQ5T5A8 94 aa3.88□□□□□ -1.79
CLDN12-213ENST00000496677 ROMO1P60602 79 aa3.85□□□□□ -1.79
CLDN12-213ENST00000496677 KTN1-AS1Q86SY8 53 aa3.84□□□□□ -1.79
CLDN12-213ENST00000496677 SYNE1Q8NF91 8797 aaKnown RBP3.84□□□□□ -1.8
CLDN12-213ENST00000496677 A0A0A0MQY5 61 aa3.78□□□□□ -1.8
CLDN12-213ENST00000496677 MT1AP04731 61 aa3.75□□□□□ -1.81
CLDN12-213ENST00000496677 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
CLDN12-213ENST00000496677 KRTAP5-2Q701N4 177 aa3.73□□□□□ -1.81
CLDN12-213ENST00000496677 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
CLDN12-213ENST00000496677 PRAC1Q96KF2 57 aa3.71□□□□□ -1.82
CLDN12-213ENST00000496677 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
CLDN12-213ENST00000496677 KRTAP6-2Q3LI66 62 aa3.57□□□□□ -1.84
CLDN12-213ENST00000496677 KRTAP5-8O75690 187 aa3.56□□□□□ -1.84
CLDN12-213ENST00000496677 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
CLDN12-213ENST00000496677 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
CLDN12-213ENST00000496677 NDUFAF8A1L188 74 aa3.37□□□□□ -1.87
CLDN12-213ENST00000496677 OBSCNQ5VST9 7968 aa3.36□□□□□ -1.87
CLDN12-213ENST00000496677 MUC5BQ9HC84 5762 aaPredicted RBP3.36□□□□□ -1.87
CLDN12-213ENST00000496677 AHNAKQ09666 5890 aaKnown RBP3.35□□□□□ -1.87
CLDN12-213ENST00000496677 MUC5ACP98088 5654 aa3.35□□□□□ -1.87
CLDN12-213ENST00000496677 LUZP6Q538Z0 58 aa3.05□□□□□ -1.92
CLDN12-213ENST00000496677 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
CLDN12-213ENST00000496677 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
CLDN12-213ENST00000496677 LCE1BQ5T7P3 118 aa2.95□□□□□ -1.94
CLDN12-213ENST00000496677 LCE3DQ9BYE3 92 aa2.77□□□□□ -1.97
CLDN12-213ENST00000496677 INE1O15225 51 aa2.65□□□□□ -1.99
CLDN12-213ENST00000496677 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
CLDN12-213ENST00000496677 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
CLDN12-213ENST00000496677 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
CLDN12-213ENST00000496677 PRM1P04553 51 aa1.99□□□□□ -2.09
CLDN12-213ENST00000496677 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
CLDN12-213ENST00000496677 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 92.9 ms