RNA–Protein interactions for RNA: ENST00000496580.1

LRP8-211, Transcript of LDL receptor related protein 8, humanhuman

TSL 2

Gene LRP8, Length 507 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-211ENST00000496580 KTN1-AS1Q86SY8 53 aa4.52□□□□□ -1.69
LRP8-211ENST00000496580 KRTAP10-7P60409 375 aaPredicted RBP4.48□□□□□ -1.69
LRP8-211ENST00000496580 C10orf95Q9H7T3 257 aa4.47□□□□□ -1.69
LRP8-211ENST00000496580 KRTAP25-1Q3LHN0 102 aa4.46□□□□□ -1.7
LRP8-211ENST00000496580 TNP1P09430 55 aa4.45□□□□□ -1.7
LRP8-211ENST00000496580 KRTAP10-12P60413 245 aa4.42□□□□□ -1.7
LRP8-211ENST00000496580 AHNAK2Q8IVF2 5795 aa4.4□□□□□ -1.71
LRP8-211ENST00000496580 HMCN1Q96RW7 5635 aa4.39□□□□□ -1.71
LRP8-211ENST00000496580 LCE1DQ5T752 114 aa4.37□□□□□ -1.71
LRP8-211ENST00000496580 SVIPQ8NHG7 77 aa4.35□□□□□ -1.71
LRP8-211ENST00000496580 KRTAP23-1A1A580 65 aa4.34□□□□□ -1.71
LRP8-211ENST00000496580 PP632Q6XCG6 107 aa4.34□□□□□ -1.71
LRP8-211ENST00000496580 PRAC1Q96KF2 57 aa4.33□□□□□ -1.72
LRP8-211ENST00000496580 LCE5AQ5TCM9 118 aa4.28□□□□□ -1.72
LRP8-211ENST00000496580 MT4P47944 62 aa4.27□□□□□ -1.73
LRP8-211ENST00000496580 KRTAP5-10Q6L8G5 202 aa4.26□□□□□ -1.73
LRP8-211ENST00000496580 KRTAP19-3Q7Z4W3 81 aa4.21□□□□□ -1.74
LRP8-211ENST00000496580 KRTAP19-7Q3SYF9 63 aa4.19□□□□□ -1.74
LRP8-211ENST00000496580 LCE4AQ5TA78 99 aa4.19□□□□□ -1.74
LRP8-211ENST00000496580 MT1EP04732 61 aa4.18□□□□□ -1.74
LRP8-211ENST00000496580 LCE3AQ5TA76 89 aa4.16□□□□□ -1.74
LRP8-211ENST00000496580 KRTAP5-7Q6L8G8 165 aa4.14□□□□□ -1.75
LRP8-211ENST00000496580 KRTAP4-6Q9BYQ5 205 aa4.1□□□□□ -1.75
LRP8-211ENST00000496580 KRTAP5-4Q6L8H1 288 aa4.06□□□□□ -1.76
LRP8-211ENST00000496580 KRTAP5-3Q6L8H2 238 aa4.06□□□□□ -1.76
LRP8-211ENST00000496580 KRTAP12-3P60328 96 aa4.04□□□□□ -1.76
LRP8-211ENST00000496580 MT1GP13640 62 aa4.03□□□□□ -1.76
LRP8-211ENST00000496580 SPRR5A0A1B0GTR4 108 aa4.01□□□□□ -1.77
LRP8-211ENST00000496580 MT1MQ8N339 61 aa4.01□□□□□ -1.77
LRP8-211ENST00000496580 KRTAP19-5Q3LI72 72 aa3.98□□□□□ -1.77
LRP8-211ENST00000496580 KRTAP4-3Q9BYR4 195 aa3.98□□□□□ -1.77
LRP8-211ENST00000496580 KRTAP15-1Q3LI76 137 aa3.97□□□□□ -1.77
LRP8-211ENST00000496580 KRTAP19-4Q3LI73 84 aa3.95□□□□□ -1.78
LRP8-211ENST00000496580 MT1LQ93083 61 aa3.91□□□□□ -1.78
LRP8-211ENST00000496580 KRTAP20-2Q3LI61 65 aa3.88□□□□□ -1.79
LRP8-211ENST00000496580 SYNE1Q8NF91 8797 aaKnown RBP3.8□□□□□ -1.8
LRP8-211ENST00000496580 LCE3CQ5T5A8 94 aa3.77□□□□□ -1.81
LRP8-211ENST00000496580 KRTAP4-7Q9BYR0 210 aa3.75□□□□□ -1.81
LRP8-211ENST00000496580 LUZP6Q538Z0 58 aa3.71□□□□□ -1.82
LRP8-211ENST00000496580 KRTAP5-5Q701N2 237 aaPredicted RBP3.71□□□□□ -1.82
LRP8-211ENST00000496580 AHNAKQ09666 5890 aaKnown RBP3.7□□□□□ -1.82
LRP8-211ENST00000496580 MUC5BQ9HC84 5762 aaPredicted RBP3.66□□□□□ -1.82
LRP8-211ENST00000496580 KRTAP12-4P60329 112 aa3.66□□□□□ -1.82
LRP8-211ENST00000496580 MUC5ACP98088 5654 aa3.65□□□□□ -1.83
LRP8-211ENST00000496580 KRTAP4-11Q9BYQ6 195 aa3.62□□□□□ -1.83
LRP8-211ENST00000496580 LOC100996750A0A140TA64 210 aa3.58□□□□□ -1.84
LRP8-211ENST00000496580 KRTAP5-8O75690 187 aa3.56□□□□□ -1.84
LRP8-211ENST00000496580 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
LRP8-211ENST00000496580 NDUFAF8A1L188 74 aa3.47□□□□□ -1.85
LRP8-211ENST00000496580 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.86
LRP8-211ENST00000496580 KRTAP9-6A8MVA2 160 aa3.46□□□□□ -1.86
LRP8-211ENST00000496580 KRTAP9-9Q9BYP9 154 aa3.39□□□□□ -1.87
LRP8-211ENST00000496580 KRTAP6-1Q3LI64 71 aa3.35□□□□□ -1.87
LRP8-211ENST00000496580 MT1AP04731 61 aa3.31□□□□□ -1.88
LRP8-211ENST00000496580 KRTAP6-2Q3LI66 62 aa3.27□□□□□ -1.89
LRP8-211ENST00000496580 KRTAP9-4Q9BYQ2 154 aa3.24□□□□□ -1.89
LRP8-211ENST00000496580 KRTAP5-1Q6L8H4 278 aa3.21□□□□□ -1.9
LRP8-211ENST00000496580 A0A0A0MQY5 61 aa3.16□□□□□ -1.9
LRP8-211ENST00000496580 MT3P25713 68 aa3.02□□□□□ -1.93
LRP8-211ENST00000496580 H3BS24 57 aa2.97□□□□□ -1.93
LRP8-211ENST00000496580 INE1O15225 51 aa2.97□□□□□ -1.93
LRP8-211ENST00000496580 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
LRP8-211ENST00000496580 LCE3DQ9BYE3 92 aa2.85□□□□□ -1.95
LRP8-211ENST00000496580 KRTAP4-2Q9BYR5 136 aa2.81□□□□□ -1.96
LRP8-211ENST00000496580 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
LRP8-211ENST00000496580 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
LRP8-211ENST00000496580 KRTAP4-12Q9BQ66 201 aa2.73□□□□□ -1.97
LRP8-211ENST00000496580 LCE1CQ5T751 118 aa2.67□□□□□ -1.98
LRP8-211ENST00000496580 KRTAP5-11Q6L8G4 156 aa2.55□□□□□ -2
LRP8-211ENST00000496580 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
LRP8-211ENST00000496580 LCE1FQ5T754 118 aa2.47□□□□□ -2.01
LRP8-211ENST00000496580 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.37□□□□□ -2.03
LRP8-211ENST00000496580 PRM1P04553 51 aa2.35□□□□□ -2.03
LRP8-211ENST00000496580 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
LRP8-211ENST00000496580 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
LRP8-211ENST00000496580 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
LRP8-211ENST00000496580 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
LRP8-211ENST00000496580 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 9.3 ms