RNA–Protein interactions for RNA: ENST00000496318.5

HLA-DQA1-207, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-207ENST00000496318 CAMK2N1Q7Z7J9 78 aa4.45□□□□□ -1.7
HLA-DQA1-207ENST00000496318 SPATA8Q6RVD6 105 aa4.43□□□□□ -1.7
HLA-DQA1-207ENST00000496318 LINC01558Q9Y6Z2 57 aa4.43□□□□□ -1.7
HLA-DQA1-207ENST00000496318 KRTAP19-7Q3SYF9 63 aa4.38□□□□□ -1.71
HLA-DQA1-207ENST00000496318 A0A1B0GU33 70 aa4.35□□□□□ -1.71
HLA-DQA1-207ENST00000496318 NDUFAF8A1L188 74 aa4.35□□□□□ -1.71
HLA-DQA1-207ENST00000496318 SPINT4Q6UDR6 99 aa4.35□□□□□ -1.71
HLA-DQA1-207ENST00000496318 PRR15LQ9BU68 103 aa4.35□□□□□ -1.71
HLA-DQA1-207ENST00000496318 A0A1B0GU69 56 aa4.34□□□□□ -1.71
HLA-DQA1-207ENST00000496318 MT1EP04732 61 aa4.34□□□□□ -1.71
HLA-DQA1-207ENST00000496318 PSPHP1O15172 72 aa4.32□□□□□ -1.72
HLA-DQA1-207ENST00000496318 KRTAP12-1P59990 96 aa4.32□□□□□ -1.72
HLA-DQA1-207ENST00000496318 A8MU10 97 aa4.28□□□□□ -1.72
HLA-DQA1-207ENST00000496318 KRTAP19-5Q3LI72 72 aa4.28□□□□□ -1.72
HLA-DQA1-207ENST00000496318 KRTAP19-3Q7Z4W3 81 aa4.28□□□□□ -1.72
HLA-DQA1-207ENST00000496318 DSTQ03001 7570 aaKnown RBP4.28□□□□□ -1.73
HLA-DQA1-207ENST00000496318 PRO0628Q9UI54 55 aa4.27□□□□□ -1.73
HLA-DQA1-207ENST00000496318 MT3P25713 68 aa4.25□□□□□ -1.73
HLA-DQA1-207ENST00000496318 A6NED7 52 aa4.23□□□□□ -1.73
HLA-DQA1-207ENST00000496318 BRK1Q8WUW1 75 aa4.23□□□□□ -1.73
HLA-DQA1-207ENST00000496318 UQCR11O14957 56 aa4.22□□□□□ -1.73
HLA-DQA1-207ENST00000496318 CDC42SE1Q9NRR8 79 aa4.22□□□□□ -1.73
HLA-DQA1-207ENST00000496318 LCE3AQ5TA76 89 aa4.17□□□□□ -1.74
HLA-DQA1-207ENST00000496318 C10orf95Q9H7T3 257 aa4.16□□□□□ -1.74
HLA-DQA1-207ENST00000496318 KRTAP4-3Q9BYR4 195 aa4.15□□□□□ -1.75
HLA-DQA1-207ENST00000496318 MIR22HGQ0VDD5 57 aa4.14□□□□□ -1.75
HLA-DQA1-207ENST00000496318 MT1MQ8N339 61 aa4.14□□□□□ -1.75
HLA-DQA1-207ENST00000496318 MT1LQ93083 61 aa4.14□□□□□ -1.75
HLA-DQA1-207ENST00000496318 GPR98Q8WXG9 6306 aa4.13□□□□□ -1.75
HLA-DQA1-207ENST00000496318 MT1GP13640 62 aa4.12□□□□□ -1.75
HLA-DQA1-207ENST00000496318 MT4P47944 62 aa4.06□□□□□ -1.76
HLA-DQA1-207ENST00000496318 PMAIP1Q13794 54 aa4.05□□□□□ -1.76
HLA-DQA1-207ENST00000496318 PP632Q6XCG6 107 aa4.05□□□□□ -1.76
HLA-DQA1-207ENST00000496318 HMCN1Q96RW7 5635 aa4.05□□□□□ -1.76
HLA-DQA1-207ENST00000496318 TNP1P09430 55 aa4.04□□□□□ -1.76
HLA-DQA1-207ENST00000496318 K7ERS5 55 aa3.99□□□□□ -1.77
HLA-DQA1-207ENST00000496318 AHNAK2Q8IVF2 5795 aa3.96□□□□□ -1.78
HLA-DQA1-207ENST00000496318 KRTAP12-3P60328 96 aa3.94□□□□□ -1.78
HLA-DQA1-207ENST00000496318 KRTAP5-4Q6L8H1 288 aa3.93□□□□□ -1.78
HLA-DQA1-207ENST00000496318 KTN1-AS1Q86SY8 53 aa3.92□□□□□ -1.78
HLA-DQA1-207ENST00000496318 KRTAP25-1Q3LHN0 102 aa3.88□□□□□ -1.79
HLA-DQA1-207ENST00000496318 ROMO1P60602 79 aa3.81□□□□□ -1.8
HLA-DQA1-207ENST00000496318 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
HLA-DQA1-207ENST00000496318 KRTAP5-10Q6L8G5 202 aa3.8□□□□□ -1.8
HLA-DQA1-207ENST00000496318 KRTAP5-5Q701N2 237 aaPredicted RBP3.78□□□□□ -1.8
HLA-DQA1-207ENST00000496318 KRTAP20-2Q3LI61 65 aa3.75□□□□□ -1.81
HLA-DQA1-207ENST00000496318 SYNE1Q8NF91 8797 aaKnown RBP3.68□□□□□ -1.82
HLA-DQA1-207ENST00000496318 SPRR5A0A1B0GTR4 108 aa3.63□□□□□ -1.83
HLA-DQA1-207ENST00000496318 KRTAP12-4P60329 112 aa3.62□□□□□ -1.83
HLA-DQA1-207ENST00000496318 LCE3CQ5T5A8 94 aa3.62□□□□□ -1.83
HLA-DQA1-207ENST00000496318 KRTAP5-7Q6L8G8 165 aa3.61□□□□□ -1.83
HLA-DQA1-207ENST00000496318 KRTAP6-1Q3LI64 71 aa3.55□□□□□ -1.84
HLA-DQA1-207ENST00000496318 KRTAP9-6A8MVA2 160 aa3.52□□□□□ -1.85
HLA-DQA1-207ENST00000496318 MT1AP04731 61 aa3.49□□□□□ -1.85
HLA-DQA1-207ENST00000496318 KRTAP5-2Q701N4 177 aa3.44□□□□□ -1.86
HLA-DQA1-207ENST00000496318 KRTAP6-2Q3LI66 62 aa3.38□□□□□ -1.87
HLA-DQA1-207ENST00000496318 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
HLA-DQA1-207ENST00000496318 KRTAP5-8O75690 187 aa3.31□□□□□ -1.88
HLA-DQA1-207ENST00000496318 OBSCNQ5VST9 7968 aa3.29□□□□□ -1.88
HLA-DQA1-207ENST00000496318 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.28□□□□□ -1.88
HLA-DQA1-207ENST00000496318 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
HLA-DQA1-207ENST00000496318 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
HLA-DQA1-207ENST00000496318 AHNAKQ09666 5890 aaKnown RBP3.23□□□□□ -1.89
HLA-DQA1-207ENST00000496318 MUC5ACP98088 5654 aa3.21□□□□□ -1.9
HLA-DQA1-207ENST00000496318 LUZP6Q538Z0 58 aa3.18□□□□□ -1.9
HLA-DQA1-207ENST00000496318 KRTAP5-1Q6L8H4 278 aa3.12□□□□□ -1.91
HLA-DQA1-207ENST00000496318 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
HLA-DQA1-207ENST00000496318 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
HLA-DQA1-207ENST00000496318 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
HLA-DQA1-207ENST00000496318 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
HLA-DQA1-207ENST00000496318 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
HLA-DQA1-207ENST00000496318 INE1O15225 51 aa2.61□□□□□ -1.99
HLA-DQA1-207ENST00000496318 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
HLA-DQA1-207ENST00000496318 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
HLA-DQA1-207ENST00000496318 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
HLA-DQA1-207ENST00000496318 PRM1P04553 51 aa1.94□□□□□ -2.1
HLA-DQA1-207ENST00000496318 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
HLA-DQA1-207ENST00000496318 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 65.9 ms