RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 MIR22HGQ0VDD5 57 aa4.64□□□□□ -1.67
APTX-233ENST00000496030 LCE1DQ5T752 114 aa4.64□□□□□ -1.67
APTX-233ENST00000496030 C10orf95Q9H7T3 257 aa4.61□□□□□ -1.67
APTX-233ENST00000496030 DSTQ03001 7570 aaKnown RBP4.6□□□□□ -1.67
APTX-233ENST00000496030 KRTAP4-9Q9BYQ8 210 aa4.59□□□□□ -1.67
APTX-233ENST00000496030 A6NED7 52 aa4.53□□□□□ -1.68
APTX-233ENST00000496030 KRTAP4-7Q9BYR0 210 aa4.53□□□□□ -1.68
APTX-233ENST00000496030 KRTAP19-7Q3SYF9 63 aa4.48□□□□□ -1.69
APTX-233ENST00000496030 TNP1P09430 55 aa4.47□□□□□ -1.69
APTX-233ENST00000496030 K7ERS5 55 aa4.44□□□□□ -1.7
APTX-233ENST00000496030 LCE3AQ5TA76 89 aa4.42□□□□□ -1.7
APTX-233ENST00000496030 KRTAP19-5Q3LI72 72 aa4.41□□□□□ -1.7
APTX-233ENST00000496030 LCE5AQ5TCM9 118 aa4.41□□□□□ -1.7
APTX-233ENST00000496030 HMCN1Q96RW7 5635 aa4.41□□□□□ -1.7
APTX-233ENST00000496030 MT1EP04732 61 aa4.4□□□□□ -1.71
APTX-233ENST00000496030 CDC42SE1Q9NRR8 79 aa4.4□□□□□ -1.71
APTX-233ENST00000496030 AHNAK2Q8IVF2 5795 aa4.4□□□□□ -1.71
APTX-233ENST00000496030 KRTAP25-1Q3LHN0 102 aa4.36□□□□□ -1.71
APTX-233ENST00000496030 KRTAP5-10Q6L8G5 202 aa4.36□□□□□ -1.71
APTX-233ENST00000496030 KRTAP4-11Q9BYQ6 195 aa4.35□□□□□ -1.71
APTX-233ENST00000496030 KRTAP23-1A1A580 65 aa4.33□□□□□ -1.72
APTX-233ENST00000496030 KRTAP4-2Q9BYR5 136 aa4.33□□□□□ -1.72
APTX-233ENST00000496030 KRTAP19-3Q7Z4W3 81 aa4.3□□□□□ -1.72
APTX-233ENST00000496030 MT4P47944 62 aa4.28□□□□□ -1.72
APTX-233ENST00000496030 ROMO1P60602 79 aa4.26□□□□□ -1.73
APTX-233ENST00000496030 KRTAP5-7Q6L8G8 165 aa4.25□□□□□ -1.73
APTX-233ENST00000496030 MT1LQ93083 61 aa4.25□□□□□ -1.73
APTX-233ENST00000496030 KRTAP12-3P60328 96 aa4.24□□□□□ -1.73
APTX-233ENST00000496030 MT1GP13640 62 aa4.23□□□□□ -1.73
APTX-233ENST00000496030 MT1MQ8N339 61 aa4.17□□□□□ -1.74
APTX-233ENST00000496030 BRK1Q8WUW1 75 aa4.16□□□□□ -1.74
APTX-233ENST00000496030 SPRR5A0A1B0GTR4 108 aa4.13□□□□□ -1.75
APTX-233ENST00000496030 KRTAP5-3Q6L8H2 238 aa4.13□□□□□ -1.75
APTX-233ENST00000496030 PP632Q6XCG6 107 aa4.13□□□□□ -1.75
APTX-233ENST00000496030 KRTAP4-3Q9BYR4 195 aa4.1□□□□□ -1.75
APTX-233ENST00000496030 KRTAP15-1Q3LI76 137 aa4.08□□□□□ -1.76
APTX-233ENST00000496030 KRTAP5-4Q6L8H1 288 aa4.06□□□□□ -1.76
APTX-233ENST00000496030 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
APTX-233ENST00000496030 PMAIP1Q13794 54 aa3.93□□□□□ -1.78
APTX-233ENST00000496030 KRTAP20-2Q3LI61 65 aa3.87□□□□□ -1.79
APTX-233ENST00000496030 PRO0628Q9UI54 55 aa3.85□□□□□ -1.79
APTX-233ENST00000496030 KRTAP5-5Q701N2 237 aaPredicted RBP3.83□□□□□ -1.8
APTX-233ENST00000496030 AHNAKQ09666 5890 aaKnown RBP3.78□□□□□ -1.8
APTX-233ENST00000496030 KRTAP9-6A8MVA2 160 aa3.77□□□□□ -1.81
APTX-233ENST00000496030 PRAC1Q96KF2 57 aa3.76□□□□□ -1.81
APTX-233ENST00000496030 MUC5ACP98088 5654 aa3.73□□□□□ -1.81
APTX-233ENST00000496030 MUC5BQ9HC84 5762 aaPredicted RBP3.7□□□□□ -1.82
APTX-233ENST00000496030 SYNE1Q8NF91 8797 aaKnown RBP3.66□□□□□ -1.82
APTX-233ENST00000496030 KRTAP12-4P60329 112 aa3.63□□□□□ -1.83
APTX-233ENST00000496030 MT1AP04731 61 aa3.61□□□□□ -1.83
APTX-233ENST00000496030 KTN1-AS1Q86SY8 53 aa3.61□□□□□ -1.83
APTX-233ENST00000496030 KRTAP5-8O75690 187 aa3.6□□□□□ -1.83
APTX-233ENST00000496030 KRTAP6-1Q3LI64 71 aa3.6□□□□□ -1.83
APTX-233ENST00000496030 SVIPQ8NHG7 77 aa3.57□□□□□ -1.84
APTX-233ENST00000496030 KRTAP5-2Q701N4 177 aa3.46□□□□□ -1.86
APTX-233ENST00000496030 A0A0A0MQY5 61 aa3.41□□□□□ -1.86
APTX-233ENST00000496030 OBSCNQ5VST9 7968 aa3.4□□□□□ -1.86
APTX-233ENST00000496030 KRTAP6-2Q3LI66 62 aa3.38□□□□□ -1.87
APTX-233ENST00000496030 MT3P25713 68 aa3.27□□□□□ -1.89
APTX-233ENST00000496030 KRTAP5-1Q6L8H4 278 aa3.21□□□□□ -1.9
APTX-233ENST00000496030 LUZP6Q538Z0 58 aa3.05□□□□□ -1.92
APTX-233ENST00000496030 LCE1EQ5T753 118 aa2.97□□□□□ -1.93
APTX-233ENST00000496030 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
APTX-233ENST00000496030 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
APTX-233ENST00000496030 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
APTX-233ENST00000496030 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.82□□□□□ -1.96
APTX-233ENST00000496030 NDUFAF8A1L188 74 aa2.76□□□□□ -1.97
APTX-233ENST00000496030 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
APTX-233ENST00000496030 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
APTX-233ENST00000496030 LCE3EQ5T5B0 92 aa2.74□□□□□ -1.97
APTX-233ENST00000496030 PHGR1C9JFL3 82 aa2.55□□□□□ -2
APTX-233ENST00000496030 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
APTX-233ENST00000496030 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
APTX-233ENST00000496030 INE1O15225 51 aa2.21□□□□□ -2.06
APTX-233ENST00000496030 PRM1P04553 51 aa2.2□□□□□ -2.06
APTX-233ENST00000496030 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
APTX-233ENST00000496030 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
APTX-233ENST00000496030 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 130.4 ms