RNA–Protein interactions for RNA: ENST00000495953.2

RAPGEF3-215, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-215ENST00000495953 KRTAP2-1Q9BYU5 128 aa5.75□□□□□ -1.49
RAPGEF3-215ENST00000495953 SPRR2DP22532 72 aa5.74□□□□□ -1.49
RAPGEF3-215ENST00000495953 KRTAP19-5Q3LI72 72 aa5.73□□□□□ -1.49
RAPGEF3-215ENST00000495953 MT1EP04732 61 aa5.7□□□□□ -1.5
RAPGEF3-215ENST00000495953 PP632Q6XCG6 107 aa5.66□□□□□ -1.5
RAPGEF3-215ENST00000495953 PMAIP1Q13794 54 aa5.63□□□□□ -1.51
RAPGEF3-215ENST00000495953 KRTAP12-3P60328 96 aa5.62□□□□□ -1.51
RAPGEF3-215ENST00000495953 PRO0628Q9UI54 55 aa5.61□□□□□ -1.51
RAPGEF3-215ENST00000495953 LCE3BQ5TA77 95 aa5.59□□□□□ -1.51
RAPGEF3-215ENST00000495953 KRTAP19-3Q7Z4W3 81 aa5.58□□□□□ -1.52
RAPGEF3-215ENST00000495953 LCE5AQ5TCM9 118 aa5.53□□□□□ -1.52
RAPGEF3-215ENST00000495953 MT1LQ93083 61 aa5.53□□□□□ -1.52
RAPGEF3-215ENST00000495953 MT1GP13640 62 aa5.52□□□□□ -1.53
RAPGEF3-215ENST00000495953 KRTAP19-4Q3LI73 84 aa5.45□□□□□ -1.54
RAPGEF3-215ENST00000495953 KRTAP15-1Q3LI76 137 aa5.42□□□□□ -1.54
RAPGEF3-215ENST00000495953 MT1MQ8N339 61 aa5.39□□□□□ -1.55
RAPGEF3-215ENST00000495953 DSTQ03001 7570 aaKnown RBP5.38□□□□□ -1.55
RAPGEF3-215ENST00000495953 KRTAP4-9Q9BYQ8 210 aa5.26□□□□□ -1.57
RAPGEF3-215ENST00000495953 KTN1-AS1Q86SY8 53 aa5.25□□□□□ -1.57
RAPGEF3-215ENST00000495953 PRAC1Q96KF2 57 aa5.24□□□□□ -1.57
RAPGEF3-215ENST00000495953 LCE3CQ5T5A8 94 aa5.23□□□□□ -1.57
RAPGEF3-215ENST00000495953 KRTAP4-7Q9BYR0 210 aa5.22□□□□□ -1.57
RAPGEF3-215ENST00000495953 GPR98Q8WXG9 6306 aa5.21□□□□□ -1.58
RAPGEF3-215ENST00000495953 KRTAP4-3Q9BYR4 195 aa5.2□□□□□ -1.58
RAPGEF3-215ENST00000495953 LCE1DQ5T752 114 aa5.11□□□□□ -1.59
RAPGEF3-215ENST00000495953 LCE4AQ5TA78 99 aa5.05□□□□□ -1.6
RAPGEF3-215ENST00000495953 HMCN1Q96RW7 5635 aa5.05□□□□□ -1.6
RAPGEF3-215ENST00000495953 MT4P47944 62 aa5.04□□□□□ -1.6
RAPGEF3-215ENST00000495953 KRTAP5-4Q6L8H1 288 aa4.94□□□□□ -1.62
RAPGEF3-215ENST00000495953 SVIPQ8NHG7 77 aa4.94□□□□□ -1.62
RAPGEF3-215ENST00000495953 LOC100996750A0A140TA64 210 aa4.93□□□□□ -1.62
RAPGEF3-215ENST00000495953 KRTAP5-5Q701N2 237 aaPredicted RBP4.9□□□□□ -1.63
RAPGEF3-215ENST00000495953 KRTAP4-6Q9BYQ5 205 aa4.89□□□□□ -1.63
RAPGEF3-215ENST00000495953 AHNAK2Q8IVF2 5795 aa4.88□□□□□ -1.63
RAPGEF3-215ENST00000495953 KRTAP9-6A8MVA2 160 aa4.87□□□□□ -1.63
RAPGEF3-215ENST00000495953 KRTAP5-10Q6L8G5 202 aa4.82□□□□□ -1.64
RAPGEF3-215ENST00000495953 SPRR5A0A1B0GTR4 108 aa4.79□□□□□ -1.64
RAPGEF3-215ENST00000495953 MT1AP04731 61 aa4.72□□□□□ -1.65
RAPGEF3-215ENST00000495953 KRTAP12-4P60329 112 aa4.71□□□□□ -1.66
RAPGEF3-215ENST00000495953 KRTAP20-2Q3LI61 65 aa4.68□□□□□ -1.66
RAPGEF3-215ENST00000495953 KRTAP5-3Q6L8H2 238 aa4.67□□□□□ -1.66
RAPGEF3-215ENST00000495953 KRTAP5-7Q6L8G8 165 aa4.64□□□□□ -1.67
RAPGEF3-215ENST00000495953 KRTAP6-1Q3LI64 71 aa4.63□□□□□ -1.67
RAPGEF3-215ENST00000495953 SYNE1Q8NF91 8797 aaKnown RBP4.61□□□□□ -1.67
RAPGEF3-215ENST00000495953 KRTAP9-4Q9BYQ2 154 aa4.52□□□□□ -1.69
RAPGEF3-215ENST00000495953 LUZP6Q538Z0 58 aa4.45□□□□□ -1.7
RAPGEF3-215ENST00000495953 KRTAP5-2Q701N4 177 aa4.38□□□□□ -1.71
RAPGEF3-215ENST00000495953 KRTAP6-2Q3LI66 62 aa4.35□□□□□ -1.71
RAPGEF3-215ENST00000495953 MT3P25713 68 aa4.31□□□□□ -1.72
RAPGEF3-215ENST00000495953 KRTAP4-11Q9BYQ6 195 aa4.31□□□□□ -1.72
RAPGEF3-215ENST00000495953 KRTAP5-8O75690 187 aa4.17□□□□□ -1.74
RAPGEF3-215ENST00000495953 OBSCNQ5VST9 7968 aa4.11□□□□□ -1.75
RAPGEF3-215ENST00000495953 MUC5BQ9HC84 5762 aaPredicted RBP4.06□□□□□ -1.76
RAPGEF3-215ENST00000495953 MUC5ACP98088 5654 aa4.04□□□□□ -1.76
RAPGEF3-215ENST00000495953 AHNAKQ09666 5890 aaKnown RBP4.03□□□□□ -1.76
RAPGEF3-215ENST00000495953 KRTAP9-9Q9BYP9 154 aa3.97□□□□□ -1.77
RAPGEF3-215ENST00000495953 NDUFAF8A1L188 74 aa3.96□□□□□ -1.78
RAPGEF3-215ENST00000495953 KRTAP5-1Q6L8H4 278 aa3.89□□□□□ -1.79
RAPGEF3-215ENST00000495953 LCE1EQ5T753 118 aa3.87□□□□□ -1.79
RAPGEF3-215ENST00000495953 LCE3DQ9BYE3 92 aa3.87□□□□□ -1.79
RAPGEF3-215ENST00000495953 LCE3EQ5T5B0 92 aa3.72□□□□□ -1.81
RAPGEF3-215ENST00000495953 LCE1CQ5T751 118 aa3.58□□□□□ -1.84
RAPGEF3-215ENST00000495953 LCE1BQ5T7P3 118 aa3.58□□□□□ -1.84
RAPGEF3-215ENST00000495953 KRTAP4-2Q9BYR5 136 aa3.57□□□□□ -1.84
RAPGEF3-215ENST00000495953 A0A0A0MQY5 61 aa3.43□□□□□ -1.86
RAPGEF3-215ENST00000495953 INE1O15225 51 aa3.33□□□□□ -1.88
RAPGEF3-215ENST00000495953 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
RAPGEF3-215ENST00000495953 KRTAP4-12Q9BQ66 201 aa3.25□□□□□ -1.89
RAPGEF3-215ENST00000495953 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
RAPGEF3-215ENST00000495953 KRTAP21-2Q3LI59 83 aa3.06□□□□□ -1.92
RAPGEF3-215ENST00000495953 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
RAPGEF3-215ENST00000495953 PRM1P04553 51 aa3□□□□□ -1.93
RAPGEF3-215ENST00000495953 PHGR1C9JFL3 82 aa2.81□□□□□ -1.96
RAPGEF3-215ENST00000495953 H3BS24 57 aa2.78□□□□□ -1.96
RAPGEF3-215ENST00000495953 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
RAPGEF3-215ENST00000495953 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
RAPGEF3-215ENST00000495953 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
RAPGEF3-215ENST00000495953 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 177.4 ms