RNA–Protein interactions for RNA: ENST00000495940.2

TFE3-205, Transcript of transcription factor binding to IGHM enhancer 3, human

TSL 2

Gene TFE3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TFE3-205	ENST00000495940	SPRR2G	Q9BYE4	73 aa		5.79	□□□□□ -1.48
TFE3-205	ENST00000495940	SPRR2D	P22532	72 aa		5.77	□□□□□ -1.49
TFE3-205	ENST00000495940	NDUFAF8	A1L188	74 aa		5.73	□□□□□ -1.49
TFE3-205	ENST00000495940	LUZP6	Q538Z0	58 aa		5.66	□□□□□ -1.5
TFE3-205	ENST00000495940	LCE3B	Q5TA77	95 aa		5.66	□□□□□ -1.5
TFE3-205	ENST00000495940	KRTAP8-1	Q8IUC2	63 aa		5.66	□□□□□ -1.5
TFE3-205	ENST00000495940	SPRR5	A0A1B0GTR4	108 aa		5.49	□□□□□ -1.53
TFE3-205	ENST00000495940	MT1X	P80297	61 aa		5.49	□□□□□ -1.53
TFE3-205	ENST00000495940	KRTAP4-8	A0A0G2JLE6	195 aa		5.48	□□□□□ -1.53
TFE3-205	ENST00000495940	KRTAP4-9	Q9BYQ8	210 aa		5.48	□□□□□ -1.53
TFE3-205	ENST00000495940	KRTAP4-8	Q9BYQ9	185 aa		5.48	□□□□□ -1.53
TFE3-205	ENST00000495940	DST	Q03001	7570 aa	Known RBP	5.45	□□□□□ -1.54
TFE3-205	ENST00000495940	PRO2289	Q9P1D8	64 aa		5.43	□□□□□ -1.54
TFE3-205	ENST00000495940		A0A0A0MQY5	61 aa		5.38	□□□□□ -1.55
TFE3-205	ENST00000495940	LCE3A	Q5TA76	89 aa		5.3	□□□□□ -1.56
TFE3-205	ENST00000495940	LCE1D	Q5T752	114 aa		5.26	□□□□□ -1.57
TFE3-205	ENST00000495940	KRTAP10-7	P60409	375 aa	Predicted RBP	5.25	□□□□□ -1.57
TFE3-205	ENST00000495940	AHNAK2	Q8IVF2	5795 aa		5.24	□□□□□ -1.57
TFE3-205	ENST00000495940	KRTAP10-12	P60413	245 aa		5.22	□□□□□ -1.57
TFE3-205	ENST00000495940	HMCN1	Q96RW7	5635 aa		5.21	□□□□□ -1.57
TFE3-205	ENST00000495940	KRTAP5-10	Q6L8G5	202 aa		5.19	□□□□□ -1.58
TFE3-205	ENST00000495940	KRTAP12-3	P60328	96 aa		5.16	□□□□□ -1.58
TFE3-205	ENST00000495940	MT4	P47944	62 aa		5.13	□□□□□ -1.59
TFE3-205	ENST00000495940	KRTAP19-4	Q3LI73	84 aa		5.11	□□□□□ -1.59
TFE3-205	ENST00000495940	LCE5A	Q5TCM9	118 aa		5.06	□□□□□ -1.6
TFE3-205	ENST00000495940	KRTAP5-7	Q6L8G8	165 aa		5.05	□□□□□ -1.6
TFE3-205	ENST00000495940	LCE4A	Q5TA78	99 aa		5.01	□□□□□ -1.61
TFE3-205	ENST00000495940	INE1	O15225	51 aa		4.97	□□□□□ -1.61
TFE3-205	ENST00000495940	KRTAP19-3	Q7Z4W3	81 aa		4.96	□□□□□ -1.62
TFE3-205	ENST00000495940	KRTAP19-7	Q3SYF9	63 aa		4.92	□□□□□ -1.62
TFE3-205	ENST00000495940	KRTAP5-3	Q6L8H2	238 aa		4.92	□□□□□ -1.62
TFE3-205	ENST00000495940	KRTAP4-6	Q9BYQ5	205 aa		4.91	□□□□□ -1.62
TFE3-205	ENST00000495940	MT1E	P04732	61 aa		4.9	□□□□□ -1.63
TFE3-205	ENST00000495940	LCE3C	Q5T5A8	94 aa		4.87	□□□□□ -1.63
TFE3-205	ENST00000495940	KRTAP19-5	Q3LI72	72 aa		4.86	□□□□□ -1.63
TFE3-205	ENST00000495940	KRTAP5-4	Q6L8H1	288 aa		4.83	□□□□□ -1.64
TFE3-205	ENST00000495940	MT1G	P13640	62 aa		4.73	□□□□□ -1.65
TFE3-205	ENST00000495940	MT1M	Q8N339	61 aa		4.71	□□□□□ -1.66
TFE3-205	ENST00000495940	KRTAP4-3	Q9BYR4	195 aa		4.69	□□□□□ -1.66
TFE3-205	ENST00000495940	KRTAP20-2	Q3LI61	65 aa		4.63	□□□□□ -1.67
TFE3-205	ENST00000495940	MT1L	Q93083	61 aa		4.58	□□□□□ -1.68
TFE3-205	ENST00000495940	KRTAP9-6	A8MVA2	160 aa		4.47	□□□□□ -1.69
TFE3-205	ENST00000495940	AHNAK	Q09666	5890 aa	Known RBP	4.43	□□□□□ -1.7
TFE3-205	ENST00000495940	MUC5AC	P98088	5654 aa		4.41	□□□□□ -1.7
TFE3-205	ENST00000495940	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.38	□□□□□ -1.71
TFE3-205	ENST00000495940	KRTAP4-7	Q9BYR0	210 aa		4.38	□□□□□ -1.71
TFE3-205	ENST00000495940	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.36	□□□□□ -1.71
TFE3-205	ENST00000495940	KRTAP12-4	P60329	112 aa		4.35	□□□□□ -1.71
TFE3-205	ENST00000495940	KRTAP4-11	Q9BYQ6	195 aa		4.35	□□□□□ -1.71
TFE3-205	ENST00000495940	KRTAP5-8	O75690	187 aa		4.29	□□□□□ -1.72
TFE3-205	ENST00000495940	SYNE1	Q8NF91	8797 aa	Known RBP	4.27	□□□□□ -1.73
TFE3-205	ENST00000495940	LOC100996750	A0A140TA64	210 aa		4.18	□□□□□ -1.74
TFE3-205	ENST00000495940	KRTAP5-2	Q701N4	177 aa		4.14	□□□□□ -1.75
TFE3-205	ENST00000495940	KRTAP9-9	Q9BYP9	154 aa		4.1	□□□□□ -1.75
TFE3-205	ENST00000495940	OBSCN	Q5VST9	7968 aa		4.02	□□□□□ -1.77
TFE3-205	ENST00000495940	MT1A	P04731	61 aa		4.01	□□□□□ -1.77
TFE3-205	ENST00000495940	KRTAP6-1	Q3LI64	71 aa		3.92	□□□□□ -1.78
TFE3-205	ENST00000495940	KRTAP6-2	Q3LI66	62 aa		3.86	□□□□□ -1.79
TFE3-205	ENST00000495940	KRTAP5-1	Q6L8H4	278 aa		3.83	□□□□□ -1.8
TFE3-205	ENST00000495940	KRTAP9-4	Q9BYQ2	154 aa		3.78	□□□□□ -1.8
TFE3-205	ENST00000495940	LCE3D	Q9BYE3	92 aa		3.75	□□□□□ -1.81
TFE3-205	ENST00000495940	LCE3E	Q5T5B0	92 aa		3.74	□□□□□ -1.81
TFE3-205	ENST00000495940	MT3	P25713	68 aa		3.58	□□□□□ -1.84
TFE3-205	ENST00000495940	PRM1	P04553	51 aa		3.41	□□□□□ -1.86
TFE3-205	ENST00000495940	LCE1E	Q5T753	118 aa		3.36	□□□□□ -1.87
TFE3-205	ENST00000495940	KRTAP4-2	Q9BYR5	136 aa		3.32	□□□□□ -1.88
TFE3-205	ENST00000495940	LCE1B	Q5T7P3	118 aa		3.31	□□□□□ -1.88
TFE3-205	ENST00000495940	KRTAP4-12	Q9BQ66	201 aa		3.27	□□□□□ -1.89
TFE3-205	ENST00000495940	LCE1C	Q5T751	118 aa		3.14	□□□□□ -1.91
TFE3-205	ENST00000495940	PHGR1	C9JFL3	82 aa		3.06	□□□□□ -1.92
TFE3-205	ENST00000495940	KRTAP5-11	Q6L8G4	156 aa		3.06	□□□□□ -1.92
TFE3-205	ENST00000495940	LCE1F	Q5T754	118 aa		2.94	□□□□□ -1.94
TFE3-205	ENST00000495940	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.78	□□□□□ -1.96
TFE3-205	ENST00000495940	KRTAP21-2	Q3LI59	83 aa		2.58	□□□□□ -2
TFE3-205	ENST00000495940	KRTAP4-4	Q9BYR3	166 aa		2.51	□□□□□ -2.01
TFE3-205	ENST00000495940	MUC19	Q7Z5P9	8384 aa		2.51	□□□□□ -2.01
TFE3-205	ENST00000495940	KRTAP21-1	Q3LI58	79 aa		2.29	□□□□□ -2.04
TFE3-205	ENST00000495940	MUC16	Q8WXI7	14507 aa		1.75	□□□□□ -2.13

Retrieved 78 of 20,778 RNA–protein pairs in 40.2 ms