RNA–Protein interactions for RNA: ENST00000495934.2

C9orf78-207, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-207ENST00000495934 A0A1B0GU69 56 aa4.11□□□□□ -1.75
C9orf78-207ENST00000495934 SPATA8Q6RVD6 105 aa4.1□□□□□ -1.75
C9orf78-207ENST00000495934 LINC01558Q9Y6Z2 57 aa4.07□□□□□ -1.76
C9orf78-207ENST00000495934 A0A0D9SG42 100 aa4.05□□□□□ -1.76
C9orf78-207ENST00000495934 KRTAP5-7Q6L8G8 165 aa4.05□□□□□ -1.76
C9orf78-207ENST00000495934 MT4P47944 62 aa4.04□□□□□ -1.76
C9orf78-207ENST00000495934 PRR15LQ9BU68 103 aa4.04□□□□□ -1.76
C9orf78-207ENST00000495934 KRTAP12-1P59990 96 aa4.02□□□□□ -1.77
C9orf78-207ENST00000495934 KRTAP10-12P60413 245 aa4.02□□□□□ -1.77
C9orf78-207ENST00000495934 A8MU10 97 aa4.01□□□□□ -1.77
C9orf78-207ENST00000495934 SMIM26A0A096LP01 95 aa3.97□□□□□ -1.77
C9orf78-207ENST00000495934 SPRR5A0A1B0GTR4 108 aa3.96□□□□□ -1.78
C9orf78-207ENST00000495934 Q1T7F1 81 aa3.96□□□□□ -1.78
C9orf78-207ENST00000495934 RPS28P62857 69 aaKnown RBP3.95□□□□□ -1.78
C9orf78-207ENST00000495934 SPINT4Q6UDR6 99 aa3.95□□□□□ -1.78
C9orf78-207ENST00000495934 CAMK2N1Q7Z7J9 78 aa3.95□□□□□ -1.78
C9orf78-207ENST00000495934 V9GYY9 64 aa3.95□□□□□ -1.78
C9orf78-207ENST00000495934 UQCR11O14957 56 aa3.92□□□□□ -1.78
C9orf78-207ENST00000495934 PSPHP1O15172 72 aa3.91□□□□□ -1.78
C9orf78-207ENST00000495934 KRTAP5-1Q6L8H4 278 aa3.91□□□□□ -1.78
C9orf78-207ENST00000495934 KRTAP19-3Q7Z4W3 81 aa3.88□□□□□ -1.79
C9orf78-207ENST00000495934 KRTAP5-4Q6L8H1 288 aa3.87□□□□□ -1.79
C9orf78-207ENST00000495934 MIR22HGQ0VDD5 57 aa3.86□□□□□ -1.79
C9orf78-207ENST00000495934 C10orf95Q9H7T3 257 aa3.84□□□□□ -1.79
C9orf78-207ENST00000495934 MT1EP04732 61 aa3.8□□□□□ -1.8
C9orf78-207ENST00000495934 KRTAP19-7Q3SYF9 63 aa3.8□□□□□ -1.8
C9orf78-207ENST00000495934 KRTAP4-4Q9BYR3 166 aa3.79□□□□□ -1.8
C9orf78-207ENST00000495934 A6NED7 52 aa3.78□□□□□ -1.8
C9orf78-207ENST00000495934 K7ERS5 55 aa3.72□□□□□ -1.81
C9orf78-207ENST00000495934 MT1GP13640 62 aa3.72□□□□□ -1.81
C9orf78-207ENST00000495934 TNP1P09430 55 aa3.71□□□□□ -1.82
C9orf78-207ENST00000495934 PP632Q6XCG6 107 aa3.7□□□□□ -1.82
C9orf78-207ENST00000495934 KRTAP19-5Q3LI72 72 aa3.69□□□□□ -1.82
C9orf78-207ENST00000495934 LCE3AQ5TA76 89 aa3.69□□□□□ -1.82
C9orf78-207ENST00000495934 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
C9orf78-207ENST00000495934 CDC42SE1Q9NRR8 79 aa3.67□□□□□ -1.82
C9orf78-207ENST00000495934 MT1MQ8N339 61 aa3.66□□□□□ -1.82
C9orf78-207ENST00000495934 KRTAP20-2Q3LI61 65 aa3.64□□□□□ -1.83
C9orf78-207ENST00000495934 AHNAKQ09666 5890 aaKnown RBP3.64□□□□□ -1.83
C9orf78-207ENST00000495934 KRTAP25-1Q3LHN0 102 aa3.61□□□□□ -1.83
C9orf78-207ENST00000495934 KRTAP4-3Q9BYR4 195 aa3.61□□□□□ -1.83
C9orf78-207ENST00000495934 MT1LQ93083 61 aa3.56□□□□□ -1.84
C9orf78-207ENST00000495934 KRTAP15-1Q3LI76 137 aa3.55□□□□□ -1.84
C9orf78-207ENST00000495934 MUC5ACP98088 5654 aa3.54□□□□□ -1.84
C9orf78-207ENST00000495934 MUC5BQ9HC84 5762 aaPredicted RBP3.54□□□□□ -1.84
C9orf78-207ENST00000495934 KRTAP12-3P60328 96 aa3.53□□□□□ -1.84
C9orf78-207ENST00000495934 ROMO1P60602 79 aa3.53□□□□□ -1.84
C9orf78-207ENST00000495934 BRK1Q8WUW1 75 aa3.49□□□□□ -1.85
C9orf78-207ENST00000495934 KRTAP12-4P60329 112 aa3.46□□□□□ -1.86
C9orf78-207ENST00000495934 PRAC1Q96KF2 57 aa3.44□□□□□ -1.86
C9orf78-207ENST00000495934 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
C9orf78-207ENST00000495934 KRTAP5-5Q701N2 237 aaPredicted RBP3.4□□□□□ -1.87
C9orf78-207ENST00000495934 SYNE1Q8NF91 8797 aaKnown RBP3.33□□□□□ -1.88
C9orf78-207ENST00000495934 KRTAP5-2Q701N4 177 aa3.32□□□□□ -1.88
C9orf78-207ENST00000495934 PMAIP1Q13794 54 aa3.3□□□□□ -1.88
C9orf78-207ENST00000495934 OBSCNQ5VST9 7968 aa3.29□□□□□ -1.88
C9orf78-207ENST00000495934 LCE3CQ5T5A8 94 aa3.28□□□□□ -1.88
C9orf78-207ENST00000495934 PRO0628Q9UI54 55 aa3.24□□□□□ -1.89
C9orf78-207ENST00000495934 NDUFAF8A1L188 74 aa3.19□□□□□ -1.9
C9orf78-207ENST00000495934 KRTAP9-6A8MVA2 160 aa3.17□□□□□ -1.9
C9orf78-207ENST00000495934 KTN1-AS1Q86SY8 53 aa3.04□□□□□ -1.92
C9orf78-207ENST00000495934 KRTAP6-1Q3LI64 71 aa3.03□□□□□ -1.92
C9orf78-207ENST00000495934 MT1AP04731 61 aa3.02□□□□□ -1.93
C9orf78-207ENST00000495934 KRTAP6-2Q3LI66 62 aa3□□□□□ -1.93
C9orf78-207ENST00000495934 MT3P25713 68 aa2.96□□□□□ -1.94
C9orf78-207ENST00000495934 LUZP6Q538Z0 58 aa2.69□□□□□ -1.98
C9orf78-207ENST00000495934 LCE1FQ5T754 118 aa2.58□□□□□ -2
C9orf78-207ENST00000495934 LCE1BQ5T7P3 118 aa2.58□□□□□ -2
C9orf78-207ENST00000495934 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
C9orf78-207ENST00000495934 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
C9orf78-207ENST00000495934 LCE3DQ9BYE3 92 aa2.38□□□□□ -2.03
C9orf78-207ENST00000495934 LCE3EQ5T5B0 92 aa2.27□□□□□ -2.05
C9orf78-207ENST00000495934 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
C9orf78-207ENST00000495934 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
C9orf78-207ENST00000495934 INE1O15225 51 aa1.88□□□□□ -2.11
C9orf78-207ENST00000495934 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
C9orf78-207ENST00000495934 PRM1P04553 51 aa1.82□□□□□ -2.12
C9orf78-207ENST00000495934 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 103 ms