RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 MT1LQ93083 61 aa4.72□□□□□ -1.65
COL1A1-209ENST00000495677 A0A1B0GU69 56 aa4.71□□□□□ -1.66
COL1A1-209ENST00000495677 TMEM258P61165 79 aa4.71□□□□□ -1.66
COL1A1-209ENST00000495677 SPATA8Q6RVD6 105 aa4.71□□□□□ -1.66
COL1A1-209ENST00000495677 A0A1B0GU33 70 aa4.69□□□□□ -1.66
COL1A1-209ENST00000495677 KRTAP4-3Q9BYR4 195 aa4.67□□□□□ -1.66
COL1A1-209ENST00000495677 SPRR5A0A1B0GTR4 108 aa4.66□□□□□ -1.66
COL1A1-209ENST00000495677 KRTAP4-7Q9BYR0 210 aa4.65□□□□□ -1.67
COL1A1-209ENST00000495677 KRTAP20-2Q3LI61 65 aa4.64□□□□□ -1.67
COL1A1-209ENST00000495677 SPINT4Q6UDR6 99 aa4.63□□□□□ -1.67
COL1A1-209ENST00000495677 PRR15LQ9BU68 103 aa4.62□□□□□ -1.67
COL1A1-209ENST00000495677 A8MU10 97 aa4.57□□□□□ -1.68
COL1A1-209ENST00000495677 LINC01558Q9Y6Z2 57 aa4.56□□□□□ -1.68
COL1A1-209ENST00000495677 SMIM26A0A096LP01 95 aa4.55□□□□□ -1.68
COL1A1-209ENST00000495677 KRTAP12-1P59990 96 aa4.54□□□□□ -1.68
COL1A1-209ENST00000495677 KRTAP5-5Q701N2 237 aaPredicted RBP4.5□□□□□ -1.69
COL1A1-209ENST00000495677 KRTAP12-4P60329 112 aa4.48□□□□□ -1.69
COL1A1-209ENST00000495677 C10orf95Q9H7T3 257 aa4.48□□□□□ -1.69
COL1A1-209ENST00000495677 PCP4P48539 62 aa4.46□□□□□ -1.7
COL1A1-209ENST00000495677 H3BS24 57 aa4.45□□□□□ -1.7
COL1A1-209ENST00000495677 KRTAP4-2Q9BYR5 136 aa4.45□□□□□ -1.7
COL1A1-209ENST00000495677 UQCR11O14957 56 aa4.44□□□□□ -1.7
COL1A1-209ENST00000495677 PSPHP1O15172 72 aa4.44□□□□□ -1.7
COL1A1-209ENST00000495677 LCE3AQ5TA76 89 aa4.41□□□□□ -1.7
COL1A1-209ENST00000495677 V9GYY9 64 aa4.4□□□□□ -1.71
COL1A1-209ENST00000495677 SYNE1Q8NF91 8797 aaKnown RBP4.38□□□□□ -1.71
COL1A1-209ENST00000495677 MIR22HGQ0VDD5 57 aa4.38□□□□□ -1.71
COL1A1-209ENST00000495677 Q1T7F1 81 aa4.36□□□□□ -1.71
COL1A1-209ENST00000495677 KRTAP4-11Q9BYQ6 195 aa4.36□□□□□ -1.71
COL1A1-209ENST00000495677 TNP1P09430 55 aa4.31□□□□□ -1.72
COL1A1-209ENST00000495677 A6NED7 52 aa4.3□□□□□ -1.72
COL1A1-209ENST00000495677 K7ERS5 55 aa4.28□□□□□ -1.72
COL1A1-209ENST00000495677 KRTAP12-3P60328 96 aa4.26□□□□□ -1.73
COL1A1-209ENST00000495677 KRTAP5-8O75690 187 aa4.23□□□□□ -1.73
COL1A1-209ENST00000495677 RPS28P62857 69 aaKnown RBP4.23□□□□□ -1.73
COL1A1-209ENST00000495677 KRTAP5-2Q701N4 177 aa4.22□□□□□ -1.73
COL1A1-209ENST00000495677 MUC5ACP98088 5654 aa4.19□□□□□ -1.74
COL1A1-209ENST00000495677 MUC5BQ9HC84 5762 aaPredicted RBP4.15□□□□□ -1.74
COL1A1-209ENST00000495677 AHNAKQ09666 5890 aaKnown RBP4.14□□□□□ -1.75
COL1A1-209ENST00000495677 KRTAP19-4Q3LI73 84 aa4.13□□□□□ -1.75
COL1A1-209ENST00000495677 KRTAP25-1Q3LHN0 102 aa4.11□□□□□ -1.75
COL1A1-209ENST00000495677 CDC42SE1Q9NRR8 79 aa4.07□□□□□ -1.76
COL1A1-209ENST00000495677 OBSCNQ5VST9 7968 aa4.04□□□□□ -1.76
COL1A1-209ENST00000495677 MT1AP04731 61 aa4.02□□□□□ -1.77
COL1A1-209ENST00000495677 KRTAP6-1Q3LI64 71 aa4.01□□□□□ -1.77
COL1A1-209ENST00000495677 ROMO1P60602 79 aa4□□□□□ -1.77
COL1A1-209ENST00000495677 KRTAP6-2Q3LI66 62 aa3.91□□□□□ -1.78
COL1A1-209ENST00000495677 LCE3CQ5T5A8 94 aa3.9□□□□□ -1.79
COL1A1-209ENST00000495677 BRK1Q8WUW1 75 aa3.9□□□□□ -1.79
COL1A1-209ENST00000495677 KRTAP5-1Q6L8H4 278 aa3.88□□□□□ -1.79
COL1A1-209ENST00000495677 KRTAP23-1A1A580 65 aa3.87□□□□□ -1.79
COL1A1-209ENST00000495677 KRTAP15-1Q3LI76 137 aa3.84□□□□□ -1.79
COL1A1-209ENST00000495677 MT3P25713 68 aa3.71□□□□□ -1.82
COL1A1-209ENST00000495677 KRTAP9-6A8MVA2 160 aa3.68□□□□□ -1.82
COL1A1-209ENST00000495677 PMAIP1Q13794 54 aa3.63□□□□□ -1.83
COL1A1-209ENST00000495677 LCE1EQ5T753 118 aa3.56□□□□□ -1.84
COL1A1-209ENST00000495677 PRAC1Q96KF2 57 aa3.52□□□□□ -1.85
COL1A1-209ENST00000495677 PRO0628Q9UI54 55 aa3.47□□□□□ -1.85
COL1A1-209ENST00000495677 KTN1-AS1Q86SY8 53 aa3.31□□□□□ -1.88
COL1A1-209ENST00000495677 LCE1CQ5T751 118 aa3.3□□□□□ -1.88
COL1A1-209ENST00000495677 LCE1BQ5T7P3 118 aa3.3□□□□□ -1.88
COL1A1-209ENST00000495677 SVIPQ8NHG7 77 aa3.28□□□□□ -1.88
COL1A1-209ENST00000495677 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
COL1A1-209ENST00000495677 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
COL1A1-209ENST00000495677 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.03□□□□□ -1.92
COL1A1-209ENST00000495677 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
COL1A1-209ENST00000495677 LUZP6Q538Z0 58 aa2.91□□□□□ -1.94
COL1A1-209ENST00000495677 A0A0A0MQY5 61 aa2.85□□□□□ -1.95
COL1A1-209ENST00000495677 LCE3DQ9BYE3 92 aa2.72□□□□□ -1.97
COL1A1-209ENST00000495677 KRTAP21-2Q3LI59 83 aa2.67□□□□□ -1.98
COL1A1-209ENST00000495677 LCE3EQ5T5B0 92 aa2.59□□□□□ -1.99
COL1A1-209ENST00000495677 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
COL1A1-209ENST00000495677 NDUFAF8A1L188 74 aa2.52□□□□□ -2.01
COL1A1-209ENST00000495677 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
COL1A1-209ENST00000495677 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
COL1A1-209ENST00000495677 PRM1P04553 51 aa2.09□□□□□ -2.07
COL1A1-209ENST00000495677 INE1O15225 51 aa1.97□□□□□ -2.09
COL1A1-209ENST00000495677 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 62.7 ms