RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 LCE5AQ5TCM9 118 aa7.02□□□□□ -1.29
HDAC4-212ENST00000495497 LCE3BQ5TA77 95 aa6.94□□□□□ -1.3
HDAC4-212ENST00000495497 MT1LQ93083 61 aa6.94□□□□□ -1.3
HDAC4-212ENST00000495497 MT1GP13640 62 aa6.91□□□□□ -1.3
HDAC4-212ENST00000495497 KRTAP12-3P60328 96 aa6.91□□□□□ -1.3
HDAC4-212ENST00000495497 ROMO1P60602 79 aa6.9□□□□□ -1.3
HDAC4-212ENST00000495497 KRTAP2-2Q9BYT5 123 aa6.9□□□□□ -1.3
HDAC4-212ENST00000495497 KRTAP2-1Q9BYU5 128 aa6.9□□□□□ -1.3
HDAC4-212ENST00000495497 MT1MQ8N339 61 aa6.84□□□□□ -1.31
HDAC4-212ENST00000495497 PP632Q6XCG6 107 aa6.82□□□□□ -1.32
HDAC4-212ENST00000495497 KRTAP23-1A1A580 65 aa6.79□□□□□ -1.32
HDAC4-212ENST00000495497 DSTQ03001 7570 aaKnown RBP6.79□□□□□ -1.32
HDAC4-212ENST00000495497 KRTAP4-3Q9BYR4 195 aa6.73□□□□□ -1.33
HDAC4-212ENST00000495497 BRK1Q8WUW1 75 aa6.71□□□□□ -1.34
HDAC4-212ENST00000495497 KRTAP4-7Q9BYR0 210 aa6.69□□□□□ -1.34
HDAC4-212ENST00000495497 KRTAP15-1Q3LI76 137 aa6.57□□□□□ -1.36
HDAC4-212ENST00000495497 KRTAP19-4Q3LI73 84 aa6.43□□□□□ -1.38
HDAC4-212ENST00000495497 LCE3CQ5T5A8 94 aa6.41□□□□□ -1.38
HDAC4-212ENST00000495497 KRTAP4-9Q9BYQ8 210 aa6.41□□□□□ -1.38
HDAC4-212ENST00000495497 GPR98Q8WXG9 6306 aa6.35□□□□□ -1.39
HDAC4-212ENST00000495497 LOC100996750A0A140TA64 210 aa6.32□□□□□ -1.4
HDAC4-212ENST00000495497 LCE4AQ5TA78 99 aa6.32□□□□□ -1.4
HDAC4-212ENST00000495497 PMAIP1Q13794 54 aa6.31□□□□□ -1.4
HDAC4-212ENST00000495497 KRTAP5-4Q6L8H1 288 aa6.28□□□□□ -1.4
HDAC4-212ENST00000495497 MT4P47944 62 aa6.27□□□□□ -1.41
HDAC4-212ENST00000495497 LCE1DQ5T752 114 aa6.27□□□□□ -1.41
HDAC4-212ENST00000495497 KRTAP5-5Q701N2 237 aaPredicted RBP6.22□□□□□ -1.41
HDAC4-212ENST00000495497 HMCN1Q96RW7 5635 aa6.18□□□□□ -1.42
HDAC4-212ENST00000495497 KRTAP4-6Q9BYQ5 205 aa6.14□□□□□ -1.43
HDAC4-212ENST00000495497 PRO0628Q9UI54 55 aa6.11□□□□□ -1.43
HDAC4-212ENST00000495497 KRTAP9-6A8MVA2 160 aa6.08□□□□□ -1.44
HDAC4-212ENST00000495497 PRAC1Q96KF2 57 aa6.07□□□□□ -1.44
HDAC4-212ENST00000495497 SYNE1Q8NF91 8797 aaKnown RBP5.99□□□□□ -1.45
HDAC4-212ENST00000495497 KRTAP12-4P60329 112 aa5.94□□□□□ -1.46
HDAC4-212ENST00000495497 KRTAP20-2Q3LI61 65 aa5.93□□□□□ -1.46
HDAC4-212ENST00000495497 SPRR5A0A1B0GTR4 108 aa5.9□□□□□ -1.46
HDAC4-212ENST00000495497 MT1AP04731 61 aa5.9□□□□□ -1.46
HDAC4-212ENST00000495497 KRTAP6-1Q3LI64 71 aa5.88□□□□□ -1.47
HDAC4-212ENST00000495497 AHNAK2Q8IVF2 5795 aa5.86□□□□□ -1.47
HDAC4-212ENST00000495497 KTN1-AS1Q86SY8 53 aa5.77□□□□□ -1.49
HDAC4-212ENST00000495497 KRTAP5-3Q6L8H2 238 aa5.74□□□□□ -1.49
HDAC4-212ENST00000495497 KRTAP9-4Q9BYQ2 154 aa5.68□□□□□ -1.5
HDAC4-212ENST00000495497 KRTAP5-10Q6L8G5 202 aa5.62□□□□□ -1.51
HDAC4-212ENST00000495497 KRTAP5-2Q701N4 177 aa5.56□□□□□ -1.52
HDAC4-212ENST00000495497 KRTAP6-2Q3LI66 62 aa5.54□□□□□ -1.52
HDAC4-212ENST00000495497 SVIPQ8NHG7 77 aa5.52□□□□□ -1.53
HDAC4-212ENST00000495497 MT3P25713 68 aa5.38□□□□□ -1.55
HDAC4-212ENST00000495497 KRTAP5-7Q6L8G8 165 aa5.37□□□□□ -1.55
HDAC4-212ENST00000495497 KRTAP4-11Q9BYQ6 195 aa5.31□□□□□ -1.56
HDAC4-212ENST00000495497 OBSCNQ5VST9 7968 aa5.14□□□□□ -1.59
HDAC4-212ENST00000495497 KRTAP5-8O75690 187 aa5.14□□□□□ -1.59
HDAC4-212ENST00000495497 LUZP6Q538Z0 58 aa4.97□□□□□ -1.61
HDAC4-212ENST00000495497 KRTAP5-1Q6L8H4 278 aa4.94□□□□□ -1.62
HDAC4-212ENST00000495497 MUC5ACP98088 5654 aa4.88□□□□□ -1.63
HDAC4-212ENST00000495497 AHNAKQ09666 5890 aaKnown RBP4.87□□□□□ -1.63
HDAC4-212ENST00000495497 LCE1EQ5T753 118 aa4.81□□□□□ -1.64
HDAC4-212ENST00000495497 KRTAP9-9Q9BYP9 154 aa4.78□□□□□ -1.64
HDAC4-212ENST00000495497 MUC5BQ9HC84 5762 aaPredicted RBP4.77□□□□□ -1.65
HDAC4-212ENST00000495497 LCE3DQ9BYE3 92 aa4.68□□□□□ -1.66
HDAC4-212ENST00000495497 LCE1BQ5T7P3 118 aa4.58□□□□□ -1.68
HDAC4-212ENST00000495497 KRTAP4-2Q9BYR5 136 aa4.57□□□□□ -1.68
HDAC4-212ENST00000495497 KRTAP4-12Q9BQ66 201 aa4.5□□□□□ -1.69
HDAC4-212ENST00000495497 LCE1CQ5T751 118 aa4.48□□□□□ -1.69
HDAC4-212ENST00000495497 LCE3EQ5T5B0 92 aa4.46□□□□□ -1.7
HDAC4-212ENST00000495497 NDUFAF8A1L188 74 aa4.37□□□□□ -1.71
HDAC4-212ENST00000495497 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.11□□□□□ -1.75
HDAC4-212ENST00000495497 KRTAP5-11Q6L8G4 156 aa4.02□□□□□ -1.77
HDAC4-212ENST00000495497 H3BS24 57 aa3.94□□□□□ -1.78
HDAC4-212ENST00000495497 KRTAP21-2Q3LI59 83 aa3.86□□□□□ -1.79
HDAC4-212ENST00000495497 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
HDAC4-212ENST00000495497 PRM1P04553 51 aa3.58□□□□□ -1.84
HDAC4-212ENST00000495497 A0A0A0MQY5 61 aa3.55□□□□□ -1.84
HDAC4-212ENST00000495497 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
HDAC4-212ENST00000495497 INE1O15225 51 aa3.49□□□□□ -1.85
HDAC4-212ENST00000495497 PHGR1C9JFL3 82 aa3.47□□□□□ -1.85
HDAC4-212ENST00000495497 MUC19Q7Z5P9 8384 aa3.17□□□□□ -1.9
HDAC4-212ENST00000495497 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
HDAC4-212ENST00000495497 MUC16Q8WXI7 14507 aa2.23□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 137.5 ms