RNA–Protein interactions for RNA: ENST00000494829.1

RUNX1-217, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 3,622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-217ENST00000494829 LCE3AQ5TA76 89 aa2.32□□□□□ -2.04
RUNX1-217ENST00000494829 TNP1P09430 55 aa2.3□□□□□ -2.04
RUNX1-217ENST00000494829 MT3P25713 68 aa2.25□□□□□ -2.05
RUNX1-217ENST00000494829 PP632Q6XCG6 107 aa2.24□□□□□ -2.05
RUNX1-217ENST00000494829 NDUFAF8A1L188 74 aa2.22□□□□□ -2.05
RUNX1-217ENST00000494829 KRTAP10-12P60413 245 aa2.21□□□□□ -2.06
RUNX1-217ENST00000494829 KRTAP2-2Q9BYT5 123 aa2.21□□□□□ -2.06
RUNX1-217ENST00000494829 KRTAP8-1Q8IUC2 63 aa2.21□□□□□ -2.06
RUNX1-217ENST00000494829 FCGBPQ9Y6R7 5405 aaPredicted RBP2.17□□□□□ -2.06
RUNX1-217ENST00000494829 SPRR5A0A1B0GTR4 108 aa2.17□□□□□ -2.06
RUNX1-217ENST00000494829 KRTAP19-5Q3LI72 72 aa2.17□□□□□ -2.06
RUNX1-217ENST00000494829 LCE1FQ5T754 118 aa2.16□□□□□ -2.06
RUNX1-217ENST00000494829 KRTAP12-3P60328 96 aa2.16□□□□□ -2.06
RUNX1-217ENST00000494829 MUC12Q9UKN1 5478 aa2.13□□□□□ -2.07
RUNX1-217ENST00000494829 KRTAP19-7Q3SYF9 63 aa2.13□□□□□ -2.07
RUNX1-217ENST00000494829 PRO2289Q9P1D8 64 aa2.13□□□□□ -2.07
RUNX1-217ENST00000494829 KRTAP19-6Q3LI70 58 aa2.1□□□□□ -2.07
RUNX1-217ENST00000494829 MUC5BQ9HC84 5762 aaPredicted RBP2.08□□□□□ -2.08
RUNX1-217ENST00000494829 KRTAP9-6A8MVA2 160 aa2.07□□□□□ -2.08
RUNX1-217ENST00000494829 MACF1Q9UPN3 7388 aaKnown RBP2.07□□□□□ -2.08
RUNX1-217ENST00000494829 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
RUNX1-217ENST00000494829 KRTAP5-9P26371 169 aa2.06□□□□□ -2.08
RUNX1-217ENST00000494829 MT1EP04732 61 aa2.05□□□□□ -2.08
RUNX1-217ENST00000494829 SYNE2Q8WXH0 6885 aaKnown RBP2.04□□□□□ -2.08
RUNX1-217ENST00000494829 LCE3CQ5T5A8 94 aa2.04□□□□□ -2.08
RUNX1-217ENST00000494829 MT1LQ93083 61 aa2.03□□□□□ -2.09
RUNX1-217ENST00000494829 KRTAP4-3Q9BYR4 195 aa2.02□□□□□ -2.09
RUNX1-217ENST00000494829 LUZP6Q538Z0 58 aa2.01□□□□□ -2.09
RUNX1-217ENST00000494829 DSTQ03001 7570 aaKnown RBP2.01□□□□□ -2.09
RUNX1-217ENST00000494829 MDN1Q9NU22 5596 aa1.99□□□□□ -2.09
RUNX1-217ENST00000494829 MT1MQ8N339 61 aa1.91□□□□□ -2.1
RUNX1-217ENST00000494829 KRTAP19-3Q7Z4W3 81 aa1.91□□□□□ -2.1
RUNX1-217ENST00000494829 MT1GP13640 62 aa1.9□□□□□ -2.1
RUNX1-217ENST00000494829 SPRR2FQ96RM1 72 aa1.9□□□□□ -2.1
RUNX1-217ENST00000494829 CRCT1Q9UGL9 99 aa1.89□□□□□ -2.11
RUNX1-217ENST00000494829 LCE1EQ5T753 118 aa1.86□□□□□ -2.11
RUNX1-217ENST00000494829 GPR98Q8WXG9 6306 aa1.86□□□□□ -2.11
RUNX1-217ENST00000494829 KRTAP2-3P0C7H8 128 aa1.86□□□□□ -2.11
RUNX1-217ENST00000494829 KRTAP2-4Q9BYR9 128 aa1.86□□□□□ -2.11
RUNX1-217ENST00000494829 KRTAP2-1Q9BYU5 128 aa1.86□□□□□ -2.11
RUNX1-217ENST00000494829 SYNE1Q8NF91 8797 aaKnown RBP1.79□□□□□ -2.12
RUNX1-217ENST00000494829 KRTAP5-4Q6L8H1 288 aa1.78□□□□□ -2.13
RUNX1-217ENST00000494829 SPRR2EP22531 72 aa1.76□□□□□ -2.13
RUNX1-217ENST00000494829 SPRR2BP35325 72 aa1.76□□□□□ -2.13
RUNX1-217ENST00000494829 SPRR2AP35326 72 aa1.76□□□□□ -2.13
RUNX1-217ENST00000494829 KRTAP6-1Q3LI64 71 aa1.75□□□□□ -2.13
RUNX1-217ENST00000494829 KRTAP5-5Q701N2 237 aaPredicted RBP1.74□□□□□ -2.13
RUNX1-217ENST00000494829 LCE3EQ5T5B0 92 aa1.7□□□□□ -2.14
RUNX1-217ENST00000494829 KRTAP6-3Q3LI67 103 aa1.69□□□□□ -2.14
RUNX1-217ENST00000494829 KRTAP5-11Q6L8G4 156 aa1.69□□□□□ -2.14
RUNX1-217ENST00000494829 INE1O15225 51 aa1.67□□□□□ -2.14
RUNX1-217ENST00000494829 KRTAP5-8O75690 187 aa1.67□□□□□ -2.14
RUNX1-217ENST00000494829 SPRR2DP22532 72 aa1.67□□□□□ -2.14
RUNX1-217ENST00000494829 MT1AP04731 61 aa1.67□□□□□ -2.14
RUNX1-217ENST00000494829 KRTAP5-2Q701N4 177 aa1.66□□□□□ -2.14
RUNX1-217ENST00000494829 NEBP20929 6669 aa1.66□□□□□ -2.14
RUNX1-217ENST00000494829 OBSCNQ5VST9 7968 aa1.65□□□□□ -2.15
RUNX1-217ENST00000494829 KRTAP12-4P60329 112 aa1.6□□□□□ -2.15
RUNX1-217ENST00000494829 KRTAP6-2Q3LI66 62 aa1.57□□□□□ -2.16
RUNX1-217ENST00000494829 AHNAKQ09666 5890 aaKnown RBP1.56□□□□□ -2.16
RUNX1-217ENST00000494829 KRTAP5-7Q6L8G8 165 aa1.54□□□□□ -2.16
RUNX1-217ENST00000494829 MT4P47944 62 aa1.52□□□□□ -2.17
RUNX1-217ENST00000494829 KRTAP4-4Q9BYR3 166 aa1.52□□□□□ -2.17
RUNX1-217ENST00000494829 LCE3DQ9BYE3 92 aa1.52□□□□□ -2.17
RUNX1-217ENST00000494829 KRTAP20-2Q3LI61 65 aa1.47□□□□□ -2.17
RUNX1-217ENST00000494829 KRTAP5-1Q6L8H4 278 aa1.45□□□□□ -2.18
RUNX1-217ENST00000494829 KRTAP20-1Q3LI63 56 aa1.43□□□□□ -2.18
RUNX1-217ENST00000494829 PRM1P04553 51 aa1.42□□□□□ -2.18
RUNX1-217ENST00000494829 MUC19Q7Z5P9 8384 aa1.41□□□□□ -2.18
RUNX1-217ENST00000494829 KRTAP5-10Q6L8G5 202 aa1.38□□□□□ -2.19
RUNX1-217ENST00000494829 MUC5ACP98088 5654 aa1.35□□□□□ -2.19
RUNX1-217ENST00000494829 LCE1CQ5T751 118 aa1.26□□□□□ -2.21
RUNX1-217ENST00000494829 LCE1BQ5T7P3 118 aa1.26□□□□□ -2.21
RUNX1-217ENST00000494829 AHNAK2Q8IVF2 5795 aa1.25□□□□□ -2.21
RUNX1-217ENST00000494829 KRTAP21-2Q3LI59 83 aa1.14□□□□□ -2.23
RUNX1-217ENST00000494829 PHGR1C9JFL3 82 aa0.9□□□□□ -2.26
RUNX1-217ENST00000494829 KRTAP21-1Q3LI58 79 aa0.88□□□□□ -2.27
RUNX1-217ENST00000494829 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 47.8 ms