RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-222ENST00000494672 HUWE1Q7Z6Z7 4374 aaKnown RBP1.29□□□□□ -2.2
CCDC66-222ENST00000494672 DNAH7Q8WXX0 4024 aa1.29□□□□□ -2.2
CCDC66-222ENST00000494672 CMYA5Q8N3K9 4069 aa1.28□□□□□ -2.2
CCDC66-222ENST00000494672 DNAH2Q9P225 4427 aa1.28□□□□□ -2.2
CCDC66-222ENST00000494672 TRRAPQ9Y4A5 3859 aa1.28□□□□□ -2.21
CCDC66-222ENST00000494672 TNXBP22105 4242 aa1.27□□□□□ -2.21
CCDC66-222ENST00000494672 FLGP20930 4061 aaPredicted RBP1.27□□□□□ -2.21
CCDC66-222ENST00000494672 HRNRQ86YZ3 2850 aaPredicted RBP1.27□□□□□ -2.21
CCDC66-222ENST00000494672 DNAH1Q9P2D7 4330 aa1.26□□□□□ -2.21
CCDC66-222ENST00000494672 HSPG2P98160 4391 aa1.25□□□□□ -2.21
CCDC66-222ENST00000494672 PKHD1L1Q86WI1 4243 aa1.25□□□□□ -2.21
CCDC66-222ENST00000494672 RNF213Q63HN8 5207 aa1.24□□□□□ -2.21
CCDC66-222ENST00000494672 KRTAP19-5Q3LI72 72 aa1.24□□□□□ -2.21
CCDC66-222ENST00000494672 ANK3Q12955 4377 aaKnown RBP1.24□□□□□ -2.21
CCDC66-222ENST00000494672 DNAH9Q9NYC9 4486 aa1.23□□□□□ -2.21
CCDC66-222ENST00000494672 HECTD4Q9Y4D8 3996 aa1.23□□□□□ -2.21
CCDC66-222ENST00000494672 SSPOA2VEC9 5147 aa1.23□□□□□ -2.21
CCDC66-222ENST00000494672 DNAH17Q9UFH2 4485 aa1.22□□□□□ -2.21
CCDC66-222ENST00000494672 PKD1P98161 4303 aa1.22□□□□□ -2.21
CCDC66-222ENST00000494672 NEBP20929 6669 aa1.22□□□□□ -2.21
CCDC66-222ENST00000494672 DNAH6Q9C0G6 4158 aa1.22□□□□□ -2.21
CCDC66-222ENST00000494672 FAT3Q8TDW7 4589 aa1.2□□□□□ -2.22
CCDC66-222ENST00000494672 APOBP04114 4563 aaKnown RBP1.19□□□□□ -2.22
CCDC66-222ENST00000494672 MT1AP04731 61 aa1.18□□□□□ -2.22
CCDC66-222ENST00000494672 FAT2Q9NYQ8 4349 aa1.18□□□□□ -2.22
CCDC66-222ENST00000494672 HMCN2Q8NDA2 5059 aa1.18□□□□□ -2.22
CCDC66-222ENST00000494672 SYNE2Q8WXH0 6885 aaKnown RBP1.17□□□□□ -2.22
CCDC66-222ENST00000494672 MACF1Q9UPN3 7388 aaKnown RBP1.16□□□□□ -2.22
CCDC66-222ENST00000494672 PLECQ15149 4684 aaKnown RBP1.15□□□□□ -2.22
CCDC66-222ENST00000494672 DNAH5Q8TE73 4624 aa1.12□□□□□ -2.23
CCDC66-222ENST00000494672 AHNAK2Q8IVF2 5795 aa1.12□□□□□ -2.23
CCDC66-222ENST00000494672 PKHD1P08F94 4074 aa1.12□□□□□ -2.23
CCDC66-222ENST00000494672 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
CCDC66-222ENST00000494672 SPRR2GQ9BYE4 73 aa1.12□□□□□ -2.23
CCDC66-222ENST00000494672 LRP1Q07954 4544 aaKnown RBP1.1□□□□□ -2.23
CCDC66-222ENST00000494672 SPRR2DP22532 72 aa1.09□□□□□ -2.23
CCDC66-222ENST00000494672 SPRR2BP35325 72 aa1.09□□□□□ -2.23
CCDC66-222ENST00000494672 KRTAP5-10Q6L8G5 202 aa1.09□□□□□ -2.23
CCDC66-222ENST00000494672 AHNAKQ09666 5890 aaKnown RBP1.08□□□□□ -2.24
CCDC66-222ENST00000494672 KRTAP6-2Q3LI66 62 aa1.08□□□□□ -2.24
CCDC66-222ENST00000494672 KMT2DO14686 5537 aa1.07□□□□□ -2.24
CCDC66-222ENST00000494672 DYNC1H1Q14204 4646 aaKnown RBP1.07□□□□□ -2.24
CCDC66-222ENST00000494672 KRTAP19-3Q7Z4W3 81 aa1.07□□□□□ -2.24
CCDC66-222ENST00000494672 SPRR2AP35326 72 aa1.06□□□□□ -2.24
CCDC66-222ENST00000494672 LPAP08519 4548 aa1.06□□□□□ -2.24
CCDC66-222ENST00000494672 LRP2P98164 4655 aa1.06□□□□□ -2.24
CCDC66-222ENST00000494672 SPRR2FQ96RM1 72 aa1.05□□□□□ -2.24
CCDC66-222ENST00000494672 MT1EP04732 61 aa1.04□□□□□ -2.24
CCDC66-222ENST00000494672 STARD9Q9P2P6 4700 aa1.03□□□□□ -2.24
CCDC66-222ENST00000494672 FAT1Q14517 4588 aa1.01□□□□□ -2.25
CCDC66-222ENST00000494672 MUC12Q9UKN1 5478 aa1.01□□□□□ -2.25
CCDC66-222ENST00000494672 SYNE1Q8NF91 8797 aaKnown RBP1□□□□□ -2.25
CCDC66-222ENST00000494672 MT1LQ93083 61 aa1□□□□□ -2.25
CCDC66-222ENST00000494672 USH2AO75445 5202 aa0.99□□□□□ -2.25
CCDC66-222ENST00000494672 MT1XP80297 61 aa0.99□□□□□ -2.25
CCDC66-222ENST00000494672 KRTAP19-8Q3LI54 63 aa0.99□□□□□ -2.25
CCDC66-222ENST00000494672 MUC5BQ9HC84 5762 aaPredicted RBP0.99□□□□□ -2.25
CCDC66-222ENST00000494672 LRP1BQ9NZR2 4599 aa0.99□□□□□ -2.25
CCDC66-222ENST00000494672 MUC17Q685J3 4493 aa0.98□□□□□ -2.25
CCDC66-222ENST00000494672 SPRR2EP22531 72 aa0.98□□□□□ -2.25
CCDC66-222ENST00000494672 DSTQ03001 7570 aaKnown RBP0.96□□□□□ -2.26
CCDC66-222ENST00000494672 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
CCDC66-222ENST00000494672 KRTAP19-2Q3LHN2 52 aa0.94□□□□□ -2.26
CCDC66-222ENST00000494672 MT1HP80294 61 aa0.93□□□□□ -2.26
CCDC66-222ENST00000494672 MDN1Q9NU22 5596 aa0.88□□□□□ -2.27
CCDC66-222ENST00000494672 MUC5ACP98088 5654 aa0.87□□□□□ -2.27
CCDC66-222ENST00000494672 KRTAP19-7Q3SYF9 63 aa0.87□□□□□ -2.27
CCDC66-222ENST00000494672 MT1BP07438 61 aa0.86□□□□□ -2.27
CCDC66-222ENST00000494672 MT1GP13640 62 aa0.83□□□□□ -2.28
CCDC66-222ENST00000494672 KRTAP19-6Q3LI70 58 aa0.83□□□□□ -2.28
CCDC66-222ENST00000494672 MT1HL1P0DM35 61 aa0.76□□□□□ -2.29
CCDC66-222ENST00000494672 MT2AP02795 61 aa0.75□□□□□ -2.29
CCDC66-222ENST00000494672 KRTAP6-1Q3LI64 71 aa0.74□□□□□ -2.29
CCDC66-222ENST00000494672 MT1MQ8N339 61 aa0.74□□□□□ -2.29
CCDC66-222ENST00000494672 MT1FP04733 61 aa0.73□□□□□ -2.29
CCDC66-222ENST00000494672 MT4P47944 62 aa0.73□□□□□ -2.29
CCDC66-222ENST00000494672 PHGR1C9JFL3 82 aa0.65□□□□□ -2.31
CCDC66-222ENST00000494672 KRTAP20-2Q3LI61 65 aa0.53□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 119.6 ms