RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 KRTAP10-7P60409 375 aaPredicted RBP4.72□□□□□ -1.65
CSNK1E-212ENST00000494610 ROMO1P60602 79 aa4.7□□□□□ -1.66
CSNK1E-212ENST00000494610 TNP1P09430 55 aa4.66□□□□□ -1.66
CSNK1E-212ENST00000494610 KRTAP4-9Q9BYQ8 210 aa4.66□□□□□ -1.66
CSNK1E-212ENST00000494610 C10orf95Q9H7T3 257 aa4.65□□□□□ -1.67
CSNK1E-212ENST00000494610 KRTAP25-1Q3LHN0 102 aa4.64□□□□□ -1.67
CSNK1E-212ENST00000494610 KRTAP10-12P60413 245 aa4.61□□□□□ -1.67
CSNK1E-212ENST00000494610 HMCN1Q96RW7 5635 aa4.52□□□□□ -1.69
CSNK1E-212ENST00000494610 KRTAP23-1A1A580 65 aa4.5□□□□□ -1.69
CSNK1E-212ENST00000494610 PP632Q6XCG6 107 aa4.49□□□□□ -1.69
CSNK1E-212ENST00000494610 AHNAK2Q8IVF2 5795 aa4.47□□□□□ -1.69
CSNK1E-212ENST00000494610 LCE1DQ5T752 114 aa4.45□□□□□ -1.7
CSNK1E-212ENST00000494610 LCE5AQ5TCM9 118 aa4.43□□□□□ -1.7
CSNK1E-212ENST00000494610 PRAC1Q96KF2 57 aa4.43□□□□□ -1.7
CSNK1E-212ENST00000494610 KRTAP19-7Q3SYF9 63 aa4.4□□□□□ -1.71
CSNK1E-212ENST00000494610 LCE3AQ5TA76 89 aa4.39□□□□□ -1.71
CSNK1E-212ENST00000494610 MT4P47944 62 aa4.38□□□□□ -1.71
CSNK1E-212ENST00000494610 KRTAP19-3Q7Z4W3 81 aa4.37□□□□□ -1.71
CSNK1E-212ENST00000494610 MT1EP04732 61 aa4.36□□□□□ -1.71
CSNK1E-212ENST00000494610 KRTAP5-10Q6L8G5 202 aa4.29□□□□□ -1.72
CSNK1E-212ENST00000494610 KRTAP12-3P60328 96 aa4.26□□□□□ -1.73
CSNK1E-212ENST00000494610 LCE4AQ5TA78 99 aa4.25□□□□□ -1.73
CSNK1E-212ENST00000494610 KRTAP19-5Q3LI72 72 aa4.24□□□□□ -1.73
CSNK1E-212ENST00000494610 KRTAP4-6Q9BYQ5 205 aa4.24□□□□□ -1.73
CSNK1E-212ENST00000494610 KRTAP4-3Q9BYR4 195 aa4.21□□□□□ -1.74
CSNK1E-212ENST00000494610 MT1GP13640 62 aa4.19□□□□□ -1.74
CSNK1E-212ENST00000494610 H3BS24 57 aa4.18□□□□□ -1.74
CSNK1E-212ENST00000494610 MT1MQ8N339 61 aa4.18□□□□□ -1.74
CSNK1E-212ENST00000494610 KRTAP19-4Q3LI73 84 aa4.16□□□□□ -1.74
CSNK1E-212ENST00000494610 KRTAP15-1Q3LI76 137 aa4.15□□□□□ -1.75
CSNK1E-212ENST00000494610 KRTAP5-4Q6L8H1 288 aa4.15□□□□□ -1.75
CSNK1E-212ENST00000494610 KRTAP5-7Q6L8G8 165 aa4.13□□□□□ -1.75
CSNK1E-212ENST00000494610 KRTAP5-3Q6L8H2 238 aa4.11□□□□□ -1.75
CSNK1E-212ENST00000494610 MT1LQ93083 61 aa4.11□□□□□ -1.75
CSNK1E-212ENST00000494610 SPRR5A0A1B0GTR4 108 aa4.03□□□□□ -1.76
CSNK1E-212ENST00000494610 KRTAP4-7Q9BYR0 210 aa4.01□□□□□ -1.77
CSNK1E-212ENST00000494610 KRTAP20-2Q3LI61 65 aa3.97□□□□□ -1.77
CSNK1E-212ENST00000494610 LCE3CQ5T5A8 94 aa3.95□□□□□ -1.78
CSNK1E-212ENST00000494610 SYNE1Q8NF91 8797 aaKnown RBP3.88□□□□□ -1.79
CSNK1E-212ENST00000494610 KRTAP5-5Q701N2 237 aaPredicted RBP3.86□□□□□ -1.79
CSNK1E-212ENST00000494610 LOC100996750A0A140TA64 210 aa3.81□□□□□ -1.8
CSNK1E-212ENST00000494610 NDUFAF8A1L188 74 aa3.79□□□□□ -1.8
CSNK1E-212ENST00000494610 AHNAKQ09666 5890 aaKnown RBP3.77□□□□□ -1.81
CSNK1E-212ENST00000494610 KRTAP12-4P60329 112 aa3.77□□□□□ -1.81
CSNK1E-212ENST00000494610 MUC5BQ9HC84 5762 aaPredicted RBP3.73□□□□□ -1.81
CSNK1E-212ENST00000494610 LUZP6Q538Z0 58 aa3.73□□□□□ -1.81
CSNK1E-212ENST00000494610 MUC5ACP98088 5654 aa3.71□□□□□ -1.81
CSNK1E-212ENST00000494610 KRTAP4-11Q9BYQ6 195 aa3.7□□□□□ -1.82
CSNK1E-212ENST00000494610 KRTAP9-6A8MVA2 160 aa3.63□□□□□ -1.83
CSNK1E-212ENST00000494610 KRTAP5-8O75690 187 aa3.62□□□□□ -1.83
CSNK1E-212ENST00000494610 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
CSNK1E-212ENST00000494610 OBSCNQ5VST9 7968 aa3.57□□□□□ -1.84
CSNK1E-212ENST00000494610 KRTAP6-1Q3LI64 71 aa3.53□□□□□ -1.84
CSNK1E-212ENST00000494610 MT1AP04731 61 aa3.5□□□□□ -1.85
CSNK1E-212ENST00000494610 A0A0A0MQY5 61 aa3.48□□□□□ -1.85
CSNK1E-212ENST00000494610 KRTAP6-2Q3LI66 62 aa3.43□□□□□ -1.86
CSNK1E-212ENST00000494610 KRTAP9-9Q9BYP9 154 aa3.42□□□□□ -1.86
CSNK1E-212ENST00000494610 KRTAP9-4Q9BYQ2 154 aa3.39□□□□□ -1.87
CSNK1E-212ENST00000494610 KRTAP5-1Q6L8H4 278 aa3.3□□□□□ -1.88
CSNK1E-212ENST00000494610 INE1O15225 51 aa3.21□□□□□ -1.9
CSNK1E-212ENST00000494610 MT3P25713 68 aa3.2□□□□□ -1.9
CSNK1E-212ENST00000494610 LCE3DQ9BYE3 92 aa2.96□□□□□ -1.94
CSNK1E-212ENST00000494610 LCE1EQ5T753 118 aa2.94□□□□□ -1.94
CSNK1E-212ENST00000494610 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
CSNK1E-212ENST00000494610 KRTAP4-2Q9BYR5 136 aa2.91□□□□□ -1.94
CSNK1E-212ENST00000494610 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
CSNK1E-212ENST00000494610 KRTAP4-12Q9BQ66 201 aa2.84□□□□□ -1.95
CSNK1E-212ENST00000494610 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
CSNK1E-212ENST00000494610 KRTAP5-11Q6L8G4 156 aa2.58□□□□□ -2
CSNK1E-212ENST00000494610 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
CSNK1E-212ENST00000494610 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
CSNK1E-212ENST00000494610 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
CSNK1E-212ENST00000494610 PRM1P04553 51 aa2.4□□□□□ -2.03
CSNK1E-212ENST00000494610 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
CSNK1E-212ENST00000494610 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
CSNK1E-212ENST00000494610 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
CSNK1E-212ENST00000494610 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
CSNK1E-212ENST00000494610 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 39.5 ms