RNA–Protein interactions for RNA: ENST00000494467.1

ABCA1-204, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 3

Gene ABCA1, Length 807 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-204ENST00000494467 LCE3AQ5TA76 89 aa3.5□□□□□ -1.85
ABCA1-204ENST00000494467 KRTAP2-3P0C7H8 128 aa3.47□□□□□ -1.85
ABCA1-204ENST00000494467 KRTAP2-4Q9BYR9 128 aa3.47□□□□□ -1.85
ABCA1-204ENST00000494467 MDN1Q9NU22 5596 aa3.46□□□□□ -1.86
ABCA1-204ENST00000494467 KRTAP19-7Q3SYF9 63 aa3.46□□□□□ -1.86
ABCA1-204ENST00000494467 LCE3BQ5TA77 95 aa3.44□□□□□ -1.86
ABCA1-204ENST00000494467 KRTAP19-5Q3LI72 72 aa3.42□□□□□ -1.86
ABCA1-204ENST00000494467 MT1EP04732 61 aa3.4□□□□□ -1.87
ABCA1-204ENST00000494467 KRTAP12-3P60328 96 aa3.4□□□□□ -1.87
ABCA1-204ENST00000494467 KRTAP19-4Q3LI73 84 aa3.39□□□□□ -1.87
ABCA1-204ENST00000494467 PRAC1Q96KF2 57 aa3.38□□□□□ -1.87
ABCA1-204ENST00000494467 SPRR2FQ96RM1 72 aa3.38□□□□□ -1.87
ABCA1-204ENST00000494467 KRTAP9-9Q9BYP9 154 aa3.38□□□□□ -1.87
ABCA1-204ENST00000494467 KRTAP9-4Q9BYQ2 154 aa3.38□□□□□ -1.87
ABCA1-204ENST00000494467 LCE1AQ5T7P2 110 aa3.32□□□□□ -1.88
ABCA1-204ENST00000494467 KRTAP15-1Q3LI76 137 aa3.31□□□□□ -1.88
ABCA1-204ENST00000494467 LCE4AQ5TA78 99 aa3.31□□□□□ -1.88
ABCA1-204ENST00000494467 KRTAP19-3Q7Z4W3 81 aa3.31□□□□□ -1.88
ABCA1-204ENST00000494467 MT1LQ93083 61 aa3.31□□□□□ -1.88
ABCA1-204ENST00000494467 KRTAP2-2Q9BYT5 123 aa3.31□□□□□ -1.88
ABCA1-204ENST00000494467 KRTAP2-1Q9BYU5 128 aa3.31□□□□□ -1.88
ABCA1-204ENST00000494467 MT1GP13640 62 aa3.29□□□□□ -1.88
ABCA1-204ENST00000494467 LCE5AQ5TCM9 118 aa3.29□□□□□ -1.88
ABCA1-204ENST00000494467 SPRR2EP22531 72 aa3.26□□□□□ -1.89
ABCA1-204ENST00000494467 SPRR2BP35325 72 aa3.26□□□□□ -1.89
ABCA1-204ENST00000494467 SPRR2AP35326 72 aa3.26□□□□□ -1.89
ABCA1-204ENST00000494467 LCE1DQ5T752 114 aa3.23□□□□□ -1.89
ABCA1-204ENST00000494467 MT1MQ8N339 61 aa3.21□□□□□ -1.9
ABCA1-204ENST00000494467 LCE3CQ5T5A8 94 aa3.18□□□□□ -1.9
ABCA1-204ENST00000494467 LUZP6Q538Z0 58 aa3.15□□□□□ -1.91
ABCA1-204ENST00000494467 KRTAP4-7Q9BYR0 210 aa3.15□□□□□ -1.91
ABCA1-204ENST00000494467 SPRR2DP22532 72 aa3.14□□□□□ -1.91
ABCA1-204ENST00000494467 KRTAP4-9Q9BYQ8 210 aa3.12□□□□□ -1.91
ABCA1-204ENST00000494467 SPRR5A0A1B0GTR4 108 aa3.09□□□□□ -1.91
ABCA1-204ENST00000494467 NDUFAF8A1L188 74 aa3.07□□□□□ -1.92
ABCA1-204ENST00000494467 AHNAK2Q8IVF2 5795 aa3.06□□□□□ -1.92
ABCA1-204ENST00000494467 KRTAP4-3Q9BYR4 195 aa3.06□□□□□ -1.92
ABCA1-204ENST00000494467 DSTQ03001 7570 aaKnown RBP3.03□□□□□ -1.92
ABCA1-204ENST00000494467 KRTAP4-11Q9BYQ6 195 aa3.03□□□□□ -1.92
ABCA1-204ENST00000494467 KRTAP5-10Q6L8G5 202 aa3.01□□□□□ -1.93
ABCA1-204ENST00000494467 KRTAP4-2Q9BYR5 136 aa3.01□□□□□ -1.93
ABCA1-204ENST00000494467 KRTAP9-6A8MVA2 160 aa2.99□□□□□ -1.93
ABCA1-204ENST00000494467 KRTAP5-7Q6L8G8 165 aa2.99□□□□□ -1.93
ABCA1-204ENST00000494467 KRTAP5-5Q701N2 237 aaPredicted RBP2.97□□□□□ -1.93
ABCA1-204ENST00000494467 HMCN1Q96RW7 5635 aa2.93□□□□□ -1.94
ABCA1-204ENST00000494467 KRTAP5-4Q6L8H1 288 aa2.92□□□□□ -1.94
ABCA1-204ENST00000494467 MT1AP04731 61 aa2.84□□□□□ -1.95
ABCA1-204ENST00000494467 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.97
ABCA1-204ENST00000494467 KRTAP6-1Q3LI64 71 aa2.77□□□□□ -1.97
ABCA1-204ENST00000494467 KRTAP5-3Q6L8H2 238 aa2.75□□□□□ -1.97
ABCA1-204ENST00000494467 KRTAP12-4P60329 112 aa2.74□□□□□ -1.97
ABCA1-204ENST00000494467 INE1O15225 51 aa2.69□□□□□ -1.98
ABCA1-204ENST00000494467 MT4P47944 62 aa2.68□□□□□ -1.98
ABCA1-204ENST00000494467 KRTAP20-2Q3LI61 65 aa2.68□□□□□ -1.98
ABCA1-204ENST00000494467 SYNE1Q8NF91 8797 aaKnown RBP2.66□□□□□ -1.98
ABCA1-204ENST00000494467 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
ABCA1-204ENST00000494467 MUC5ACP98088 5654 aa2.63□□□□□ -1.99
ABCA1-204ENST00000494467 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
ABCA1-204ENST00000494467 MT3P25713 68 aa2.57□□□□□ -2
ABCA1-204ENST00000494467 KRTAP6-2Q3LI66 62 aa2.56□□□□□ -2
ABCA1-204ENST00000494467 LCE3DQ9BYE3 92 aa2.35□□□□□ -2.03
ABCA1-204ENST00000494467 KRTAP5-8O75690 187 aa2.34□□□□□ -2.03
ABCA1-204ENST00000494467 LCE1EQ5T753 118 aa2.33□□□□□ -2.04
ABCA1-204ENST00000494467 OBSCNQ5VST9 7968 aa2.3□□□□□ -2.04
ABCA1-204ENST00000494467 LCE3EQ5T5B0 92 aa2.28□□□□□ -2.04
ABCA1-204ENST00000494467 KRTAP5-1Q6L8H4 278 aa2.27□□□□□ -2.05
ABCA1-204ENST00000494467 LCE1CQ5T751 118 aa2.16□□□□□ -2.06
ABCA1-204ENST00000494467 LCE1BQ5T7P3 118 aa2.16□□□□□ -2.06
ABCA1-204ENST00000494467 KRTAP5-11Q6L8G4 156 aa2.05□□□□□ -2.08
ABCA1-204ENST00000494467 LCE1FQ5T754 118 aa2.04□□□□□ -2.08
ABCA1-204ENST00000494467 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.04□□□□□ -2.08
ABCA1-204ENST00000494467 PRM1P04553 51 aa1.86□□□□□ -2.11
ABCA1-204ENST00000494467 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
ABCA1-204ENST00000494467 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
ABCA1-204ENST00000494467 KRTAP4-4Q9BYR3 166 aa1.64□□□□□ -2.15
ABCA1-204ENST00000494467 MUC19Q7Z5P9 8384 aa1.43□□□□□ -2.18
ABCA1-204ENST00000494467 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
ABCA1-204ENST00000494467 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 96.3 ms