RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 AHNAK2Q8IVF2 5795 aa2.83□□□□□ -1.96
FN1-225ENST00000494446 KRTAP12-2P59991 146 aa2.82□□□□□ -1.96
FN1-225ENST00000494446 MT1XP80297 61 aa2.82□□□□□ -1.96
FN1-225ENST00000494446 MIR22HGQ0VDD5 57 aa2.82□□□□□ -1.96
FN1-225ENST00000494446 CSAG1Q6PB30 78 aa2.82□□□□□ -1.96
FN1-225ENST00000494446 HMCN1Q96RW7 5635 aa2.82□□□□□ -1.96
FN1-225ENST00000494446 A0A0A0MQY5 61 aa2.81□□□□□ -1.96
FN1-225ENST00000494446 H0YAA0 97 aa2.79□□□□□ -1.96
FN1-225ENST00000494446 PMAIP1Q13794 54 aa2.79□□□□□ -1.96
FN1-225ENST00000494446 SPRR5A0A1B0GTR4 108 aa2.78□□□□□ -1.96
FN1-225ENST00000494446 A0A1B0GU33 70 aa2.78□□□□□ -1.96
FN1-225ENST00000494446 LCE1EQ5T753 118 aa2.78□□□□□ -1.96
FN1-225ENST00000494446 KRTAP5-7Q6L8G8 165 aa2.78□□□□□ -1.96
FN1-225ENST00000494446 CRIPTQ9P021 101 aa2.78□□□□□ -1.96
FN1-225ENST00000494446 MT4P47944 62 aa2.77□□□□□ -1.97
FN1-225ENST00000494446 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
FN1-225ENST00000494446 KTN1-AS1Q86SY8 53 aa2.76□□□□□ -1.97
FN1-225ENST00000494446 PLAC4Q8WY50 150 aa2.74□□□□□ -1.97
FN1-225ENST00000494446 P0C880 135 aa2.71□□□□□ -1.98
FN1-225ENST00000494446 KRTAP13-4Q3LI77 160 aa2.71□□□□□ -1.98
FN1-225ENST00000494446 ADM2Q7Z4H4 148 aa2.7□□□□□ -1.98
FN1-225ENST00000494446 KRTAP5-4Q6L8H1 288 aa2.69□□□□□ -1.98
FN1-225ENST00000494446 KRTAP10-12P60413 245 aa2.67□□□□□ -1.98
FN1-225ENST00000494446 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
FN1-225ENST00000494446 K7ERS5 55 aa2.66□□□□□ -1.98
FN1-225ENST00000494446 M0QZ58 72 aa2.66□□□□□ -1.98
FN1-225ENST00000494446 KRTAP12-1P59990 96 aa2.62□□□□□ -1.99
FN1-225ENST00000494446 A0A0D9SG42 100 aa2.61□□□□□ -1.99
FN1-225ENST00000494446 PRAC1Q96KF2 57 aa2.61□□□□□ -1.99
FN1-225ENST00000494446 KRTAP19-3Q7Z4W3 81 aa2.59□□□□□ -1.99
FN1-225ENST00000494446 R4GN34 69 aa2.59□□□□□ -1.99
FN1-225ENST00000494446 ROMO1P60602 79 aa2.58□□□□□ -2
FN1-225ENST00000494446 KRTAP25-1Q3LHN0 102 aa2.55□□□□□ -2
FN1-225ENST00000494446 SPINT4Q6UDR6 99 aa2.55□□□□□ -2
FN1-225ENST00000494446 MT1EP04732 61 aa2.53□□□□□ -2
FN1-225ENST00000494446 LINC01554Q52M75 96 aa2.53□□□□□ -2
FN1-225ENST00000494446 KRTAP19-7Q3SYF9 63 aa2.52□□□□□ -2.01
FN1-225ENST00000494446 MT1GP13640 62 aa2.49□□□□□ -2.01
FN1-225ENST00000494446 AHNAKQ09666 5890 aaKnown RBP2.49□□□□□ -2.01
FN1-225ENST00000494446 PP632Q6XCG6 107 aa2.48□□□□□ -2.01
FN1-225ENST00000494446 KRTAP20-2Q3LI61 65 aa2.46□□□□□ -2.02
FN1-225ENST00000494446 C10orf95Q9H7T3 257 aa2.46□□□□□ -2.02
FN1-225ENST00000494446 MT1MQ8N339 61 aa2.45□□□□□ -2.02
FN1-225ENST00000494446 MUC5ACP98088 5654 aa2.43□□□□□ -2.02
FN1-225ENST00000494446 CAMK2N1Q7Z7J9 78 aa2.43□□□□□ -2.02
FN1-225ENST00000494446 KRTAP4-3Q9BYR4 195 aa2.43□□□□□ -2.02
FN1-225ENST00000494446 KRTAP9-6A8MVA2 160 aa2.38□□□□□ -2.03
FN1-225ENST00000494446 KRTAP19-5Q3LI72 72 aa2.38□□□□□ -2.03
FN1-225ENST00000494446 OBSCNQ5VST9 7968 aa2.37□□□□□ -2.03
FN1-225ENST00000494446 MUC5BQ9HC84 5762 aaPredicted RBP2.36□□□□□ -2.03
FN1-225ENST00000494446 TNP1P09430 55 aa2.35□□□□□ -2.03
FN1-225ENST00000494446 MT1LQ93083 61 aa2.35□□□□□ -2.03
FN1-225ENST00000494446 KRTAP12-4P60329 112 aa2.34□□□□□ -2.03
FN1-225ENST00000494446 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
FN1-225ENST00000494446 MT3P25713 68 aa2.27□□□□□ -2.05
FN1-225ENST00000494446 KRTAP5-2Q701N4 177 aa2.26□□□□□ -2.05
FN1-225ENST00000494446 KRTAP5-5Q701N2 237 aaPredicted RBP2.25□□□□□ -2.05
FN1-225ENST00000494446 LCE3AQ5TA76 89 aa2.24□□□□□ -2.05
FN1-225ENST00000494446 SYNE1Q8NF91 8797 aaKnown RBP2.21□□□□□ -2.06
FN1-225ENST00000494446 NDUFAF8A1L188 74 aa2.15□□□□□ -2.07
FN1-225ENST00000494446 KRTAP12-3P60328 96 aa2.14□□□□□ -2.07
FN1-225ENST00000494446 LUZP6Q538Z0 58 aa2.09□□□□□ -2.07
FN1-225ENST00000494446 LCE1FQ5T754 118 aa2.09□□□□□ -2.07
FN1-225ENST00000494446 KRTAP6-1Q3LI64 71 aa2.02□□□□□ -2.09
FN1-225ENST00000494446 KRTAP6-2Q3LI66 62 aa2.02□□□□□ -2.09
FN1-225ENST00000494446 LCE3CQ5T5A8 94 aa2.01□□□□□ -2.09
FN1-225ENST00000494446 MT1AP04731 61 aa1.98□□□□□ -2.09
FN1-225ENST00000494446 INE1O15225 51 aa1.79□□□□□ -2.12
FN1-225ENST00000494446 LCE1CQ5T751 118 aa1.79□□□□□ -2.12
FN1-225ENST00000494446 LCE1BQ5T7P3 118 aa1.79□□□□□ -2.12
FN1-225ENST00000494446 LCE3EQ5T5B0 92 aa1.76□□□□□ -2.13
FN1-225ENST00000494446 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
FN1-225ENST00000494446 LCE3DQ9BYE3 92 aa1.52□□□□□ -2.17
FN1-225ENST00000494446 MUC19Q7Z5P9 8384 aa1.5□□□□□ -2.17
FN1-225ENST00000494446 PRM1P04553 51 aa1.36□□□□□ -2.19
FN1-225ENST00000494446 KRTAP21-2Q3LI59 83 aa1.32□□□□□ -2.2
FN1-225ENST00000494446 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
FN1-225ENST00000494446 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 116.6 ms