RNA–Protein interactions for RNA: ENST00000494414.1

GPATCH4-207, Transcript of G-patch domain containing 4, humanhuman

TSL 5

Gene GPATCH4, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-207ENST00000494414 CAMK2N1Q7Z7J9 78 aa3.68□□□□□ -1.82
GPATCH4-207ENST00000494414 SYNE2Q8WXH0 6885 aaKnown RBP3.66□□□□□ -1.82
GPATCH4-207ENST00000494414 NDUFAF8A1L188 74 aa3.66□□□□□ -1.82
GPATCH4-207ENST00000494414 PLAC4Q8WY50 150 aa3.66□□□□□ -1.82
GPATCH4-207ENST00000494414 KRTAP10-5P60370 271 aa3.65□□□□□ -1.83
GPATCH4-207ENST00000494414 KRTAP10-7P60409 375 aaPredicted RBP3.63□□□□□ -1.83
GPATCH4-207ENST00000494414 LUZP6Q538Z0 58 aa3.6□□□□□ -1.83
GPATCH4-207ENST00000494414 TNP1P09430 55 aa3.58□□□□□ -1.84
GPATCH4-207ENST00000494414 KRTAP6-3Q3LI67 103 aa3.58□□□□□ -1.84
GPATCH4-207ENST00000494414 MT1XP80297 61 aa3.54□□□□□ -1.84
GPATCH4-207ENST00000494414 NEBP20929 6669 aa3.54□□□□□ -1.84
GPATCH4-207ENST00000494414 KRTAP5-9P26371 169 aa3.51□□□□□ -1.85
GPATCH4-207ENST00000494414 LCE1EQ5T753 118 aa3.5□□□□□ -1.85
GPATCH4-207ENST00000494414 MUC12Q9UKN1 5478 aa3.49□□□□□ -1.85
GPATCH4-207ENST00000494414 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
GPATCH4-207ENST00000494414 PRO2289Q9P1D8 64 aa3.44□□□□□ -1.86
GPATCH4-207ENST00000494414 KMT2DO14686 5537 aa3.44□□□□□ -1.86
GPATCH4-207ENST00000494414 KRTAP5-11Q6L8G4 156 aa3.43□□□□□ -1.86
GPATCH4-207ENST00000494414 KRTAP10-12P60413 245 aa3.4□□□□□ -1.87
GPATCH4-207ENST00000494414 MDN1Q9NU22 5596 aa3.39□□□□□ -1.87
GPATCH4-207ENST00000494414 SPRR5A0A1B0GTR4 108 aa3.36□□□□□ -1.87
GPATCH4-207ENST00000494414 KRTAP8-1Q8IUC2 63 aa3.29□□□□□ -1.88
GPATCH4-207ENST00000494414 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.28□□□□□ -1.88
GPATCH4-207ENST00000494414 SPRR2FQ96RM1 72 aa3.28□□□□□ -1.88
GPATCH4-207ENST00000494414 KRTAP20-1Q3LI63 56 aa3.27□□□□□ -1.89
GPATCH4-207ENST00000494414 LCE3CQ5T5A8 94 aa3.26□□□□□ -1.89
GPATCH4-207ENST00000494414 LCE3AQ5TA76 89 aa3.23□□□□□ -1.89
GPATCH4-207ENST00000494414 SPRR2EP22531 72 aa3.22□□□□□ -1.89
GPATCH4-207ENST00000494414 SPRR2BP35325 72 aa3.22□□□□□ -1.89
GPATCH4-207ENST00000494414 SPRR2AP35326 72 aa3.22□□□□□ -1.89
GPATCH4-207ENST00000494414 KRTAP19-7Q3SYF9 63 aa3.18□□□□□ -1.9
GPATCH4-207ENST00000494414 KRTAP2-3P0C7H8 128 aa3.17□□□□□ -1.9
GPATCH4-207ENST00000494414 KRTAP2-4Q9BYR9 128 aa3.17□□□□□ -1.9
GPATCH4-207ENST00000494414 INE1O15225 51 aa3.15□□□□□ -1.91
GPATCH4-207ENST00000494414 KRTAP9-6A8MVA2 160 aa3.14□□□□□ -1.91
GPATCH4-207ENST00000494414 KRTAP12-3P60328 96 aa3.14□□□□□ -1.91
GPATCH4-207ENST00000494414 MT1EP04732 61 aa3.13□□□□□ -1.91
GPATCH4-207ENST00000494414 SPRR2DP22532 72 aa3.11□□□□□ -1.91
GPATCH4-207ENST00000494414 KRTAP2-1Q9BYU5 128 aa3.08□□□□□ -1.92
GPATCH4-207ENST00000494414 KRTAP19-3Q7Z4W3 81 aa3.07□□□□□ -1.92
GPATCH4-207ENST00000494414 KRTAP19-5Q3LI72 72 aa3.05□□□□□ -1.92
GPATCH4-207ENST00000494414 MT1LQ93083 61 aa3□□□□□ -1.93
GPATCH4-207ENST00000494414 MT1GP13640 62 aa2.99□□□□□ -1.93
GPATCH4-207ENST00000494414 DSTQ03001 7570 aaKnown RBP2.99□□□□□ -1.93
GPATCH4-207ENST00000494414 LCE3EQ5T5B0 92 aa2.97□□□□□ -1.93
GPATCH4-207ENST00000494414 MT1MQ8N339 61 aa2.97□□□□□ -1.93
GPATCH4-207ENST00000494414 KRTAP5-1Q6L8H4 278 aa2.9□□□□□ -1.95
GPATCH4-207ENST00000494414 KRTAP5-4Q6L8H1 288 aa2.85□□□□□ -1.95
GPATCH4-207ENST00000494414 KRTAP4-3Q9BYR4 195 aa2.85□□□□□ -1.95
GPATCH4-207ENST00000494414 HMCN1Q96RW7 5635 aa2.83□□□□□ -1.96
GPATCH4-207ENST00000494414 GPR98Q8WXG9 6306 aa2.8□□□□□ -1.96
GPATCH4-207ENST00000494414 KRTAP5-5Q701N2 237 aaPredicted RBP2.79□□□□□ -1.96
GPATCH4-207ENST00000494414 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
GPATCH4-207ENST00000494414 AHNAK2Q8IVF2 5795 aa2.72□□□□□ -1.97
GPATCH4-207ENST00000494414 MT4P47944 62 aa2.68□□□□□ -1.98
GPATCH4-207ENST00000494414 SYNE1Q8NF91 8797 aaKnown RBP2.65□□□□□ -1.98
GPATCH4-207ENST00000494414 KRTAP20-2Q3LI61 65 aa2.63□□□□□ -1.99
GPATCH4-207ENST00000494414 KRTAP5-10Q6L8G5 202 aa2.6□□□□□ -1.99
GPATCH4-207ENST00000494414 OBSCNQ5VST9 7968 aa2.57□□□□□ -2
GPATCH4-207ENST00000494414 MT1AP04731 61 aa2.56□□□□□ -2
GPATCH4-207ENST00000494414 KRTAP12-4P60329 112 aa2.55□□□□□ -2
GPATCH4-207ENST00000494414 KRTAP5-2Q701N4 177 aa2.54□□□□□ -2
GPATCH4-207ENST00000494414 KRTAP6-1Q3LI64 71 aa2.52□□□□□ -2.01
GPATCH4-207ENST00000494414 KRTAP5-7Q6L8G8 165 aa2.49□□□□□ -2.01
GPATCH4-207ENST00000494414 LCE3DQ9BYE3 92 aa2.45□□□□□ -2.02
GPATCH4-207ENST00000494414 KRTAP6-2Q3LI66 62 aa2.37□□□□□ -2.03
GPATCH4-207ENST00000494414 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
GPATCH4-207ENST00000494414 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
GPATCH4-207ENST00000494414 LCE1BQ5T7P3 118 aa2.32□□□□□ -2.04
GPATCH4-207ENST00000494414 MUC5ACP98088 5654 aa2.23□□□□□ -2.05
GPATCH4-207ENST00000494414 AHNAKQ09666 5890 aaKnown RBP2.22□□□□□ -2.05
GPATCH4-207ENST00000494414 MUC5BQ9HC84 5762 aaPredicted RBP2.2□□□□□ -2.06
GPATCH4-207ENST00000494414 PRM1P04553 51 aa2.13□□□□□ -2.07
GPATCH4-207ENST00000494414 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
GPATCH4-207ENST00000494414 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
GPATCH4-207ENST00000494414 PHGR1C9JFL3 82 aa1.55□□□□□ -2.16
GPATCH4-207ENST00000494414 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
GPATCH4-207ENST00000494414 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 141.5 ms