RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 KRTAP2-2Q9BYT5 123 aa8.26□□□□□ -1.09
HPS3-207ENST00000494327 KRTAP2-1Q9BYU5 128 aa8.26□□□□□ -1.09
HPS3-207ENST00000494327 KRTAP19-7Q3SYF9 63 aa8.21□□□□□ -1.1
HPS3-207ENST00000494327 BRK1Q8WUW1 75 aa8.2□□□□□ -1.1
HPS3-207ENST00000494327 MT1EP04732 61 aa8.13□□□□□ -1.11
HPS3-207ENST00000494327 KRTAP4-9Q9BYQ8 210 aa8.13□□□□□ -1.11
HPS3-207ENST00000494327 C10orf95Q9H7T3 257 aa8.08□□□□□ -1.12
HPS3-207ENST00000494327 KRTAP19-5Q3LI72 72 aa8.07□□□□□ -1.12
HPS3-207ENST00000494327 KRTAP4-2Q9BYR5 136 aa8.07□□□□□ -1.12
HPS3-207ENST00000494327 KRTAP19-3Q7Z4W3 81 aa8.05□□□□□ -1.12
HPS3-207ENST00000494327 LCE5AQ5TCM9 118 aa8.04□□□□□ -1.12
HPS3-207ENST00000494327 TNP1P09430 55 aa8.02□□□□□ -1.13
HPS3-207ENST00000494327 LCE3AQ5TA76 89 aa7.94□□□□□ -1.14
HPS3-207ENST00000494327 ROMO1P60602 79 aa7.9□□□□□ -1.14
HPS3-207ENST00000494327 MT1GP13640 62 aa7.87□□□□□ -1.15
HPS3-207ENST00000494327 KRTAP25-1Q3LHN0 102 aa7.84□□□□□ -1.15
HPS3-207ENST00000494327 PP632Q6XCG6 107 aa7.82□□□□□ -1.16
HPS3-207ENST00000494327 PRO0628Q9UI54 55 aa7.81□□□□□ -1.16
HPS3-207ENST00000494327 MT1LQ93083 61 aa7.8□□□□□ -1.16
HPS3-207ENST00000494327 DSTQ03001 7570 aaKnown RBP7.79□□□□□ -1.16
HPS3-207ENST00000494327 PMAIP1Q13794 54 aa7.77□□□□□ -1.17
HPS3-207ENST00000494327 KRTAP4-11Q9BYQ6 195 aa7.77□□□□□ -1.17
HPS3-207ENST00000494327 MT1MQ8N339 61 aa7.74□□□□□ -1.17
HPS3-207ENST00000494327 KRTAP12-3P60328 96 aa7.63□□□□□ -1.19
HPS3-207ENST00000494327 LCE4AQ5TA78 99 aa7.62□□□□□ -1.19
HPS3-207ENST00000494327 KRTAP4-3Q9BYR4 195 aa7.6□□□□□ -1.19
HPS3-207ENST00000494327 KRTAP23-1A1A580 65 aa7.58□□□□□ -1.2
HPS3-207ENST00000494327 KRTAP5-3Q6L8H2 238 aa7.49□□□□□ -1.21
HPS3-207ENST00000494327 MT4P47944 62 aa7.38□□□□□ -1.23
HPS3-207ENST00000494327 GPR98Q8WXG9 6306 aa7.31□□□□□ -1.24
HPS3-207ENST00000494327 KTN1-AS1Q86SY8 53 aa7.29□□□□□ -1.24
HPS3-207ENST00000494327 KRTAP5-4Q6L8H1 288 aa7.28□□□□□ -1.24
HPS3-207ENST00000494327 PRAC1Q96KF2 57 aa7.27□□□□□ -1.25
HPS3-207ENST00000494327 HMCN1Q96RW7 5635 aa7.2□□□□□ -1.26
HPS3-207ENST00000494327 KRTAP15-1Q3LI76 137 aa7.17□□□□□ -1.26
HPS3-207ENST00000494327 KRTAP19-4Q3LI73 84 aa7.13□□□□□ -1.27
HPS3-207ENST00000494327 KRTAP5-5Q701N2 237 aaPredicted RBP7.06□□□□□ -1.28
HPS3-207ENST00000494327 LCE3CQ5T5A8 94 aa7.04□□□□□ -1.28
HPS3-207ENST00000494327 SVIPQ8NHG7 77 aa6.9□□□□□ -1.3
HPS3-207ENST00000494327 KRTAP12-4P60329 112 aa6.89□□□□□ -1.31
HPS3-207ENST00000494327 KRTAP20-2Q3LI61 65 aa6.89□□□□□ -1.31
HPS3-207ENST00000494327 AHNAK2Q8IVF2 5795 aa6.88□□□□□ -1.31
HPS3-207ENST00000494327 KRTAP5-10Q6L8G5 202 aa6.86□□□□□ -1.31
HPS3-207ENST00000494327 SPRR5A0A1B0GTR4 108 aa6.84□□□□□ -1.31
HPS3-207ENST00000494327 H3BS24 57 aa6.74□□□□□ -1.33
HPS3-207ENST00000494327 SYNE1Q8NF91 8797 aaKnown RBP6.73□□□□□ -1.33
HPS3-207ENST00000494327 KRTAP9-6A8MVA2 160 aa6.63□□□□□ -1.35
HPS3-207ENST00000494327 MT1AP04731 61 aa6.63□□□□□ -1.35
HPS3-207ENST00000494327 KRTAP6-1Q3LI64 71 aa6.61□□□□□ -1.35
HPS3-207ENST00000494327 KRTAP5-7Q6L8G8 165 aa6.61□□□□□ -1.35
HPS3-207ENST00000494327 KRTAP5-2Q701N4 177 aa6.39□□□□□ -1.39
HPS3-207ENST00000494327 KRTAP6-2Q3LI66 62 aa6.3□□□□□ -1.4
HPS3-207ENST00000494327 MT3P25713 68 aa6.08□□□□□ -1.44
HPS3-207ENST00000494327 LUZP6Q538Z0 58 aa6.07□□□□□ -1.44
HPS3-207ENST00000494327 KRTAP5-8O75690 187 aa6.04□□□□□ -1.44
HPS3-207ENST00000494327 OBSCNQ5VST9 7968 aa5.95□□□□□ -1.46
HPS3-207ENST00000494327 KRTAP5-1Q6L8H4 278 aa5.72□□□□□ -1.49
HPS3-207ENST00000494327 MUC5ACP98088 5654 aa5.68□□□□□ -1.5
HPS3-207ENST00000494327 MUC5BQ9HC84 5762 aaPredicted RBP5.65□□□□□ -1.51
HPS3-207ENST00000494327 AHNAKQ09666 5890 aaKnown RBP5.63□□□□□ -1.51
HPS3-207ENST00000494327 NDUFAF8A1L188 74 aa5.58□□□□□ -1.52
HPS3-207ENST00000494327 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.52□□□□□ -1.53
HPS3-207ENST00000494327 LCE1EQ5T753 118 aa5.51□□□□□ -1.53
HPS3-207ENST00000494327 LCE1BQ5T7P3 118 aa5.27□□□□□ -1.57
HPS3-207ENST00000494327 KRTAP5-11Q6L8G4 156 aa5.26□□□□□ -1.57
HPS3-207ENST00000494327 LCE1CQ5T751 118 aa5.12□□□□□ -1.59
HPS3-207ENST00000494327 LCE3DQ9BYE3 92 aa5.11□□□□□ -1.59
HPS3-207ENST00000494327 LCE3EQ5T5B0 92 aa4.91□□□□□ -1.62
HPS3-207ENST00000494327 A0A0A0MQY5 61 aa4.84□□□□□ -1.63
HPS3-207ENST00000494327 INE1O15225 51 aa4.63□□□□□ -1.67
HPS3-207ENST00000494327 KRTAP4-4Q9BYR3 166 aa4.62□□□□□ -1.67
HPS3-207ENST00000494327 LCE1FQ5T754 118 aa4.45□□□□□ -1.7
HPS3-207ENST00000494327 KRTAP21-2Q3LI59 83 aa4.33□□□□□ -1.72
HPS3-207ENST00000494327 PRM1P04553 51 aa4.07□□□□□ -1.76
HPS3-207ENST00000494327 PHGR1C9JFL3 82 aa4□□□□□ -1.77
HPS3-207ENST00000494327 MUC19Q7Z5P9 8384 aa3.64□□□□□ -1.83
HPS3-207ENST00000494327 KRTAP21-1Q3LI58 79 aa3.02□□□□□ -1.93
HPS3-207ENST00000494327 MUC16Q8WXI7 14507 aa2.6□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 244.3 ms