RNA–Protein interactions for RNA: ENST00000493726.1

LRCH3-218, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 733 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-218ENST00000493726 P0C880 135 aa3.16□□□□□ -1.9
LRCH3-218ENST00000493726 TRAV7A0A075B6U4 112 aa3.14□□□□□ -1.91
LRCH3-218ENST00000493726 TMEM258P61165 79 aa3.14□□□□□ -1.91
LRCH3-218ENST00000493726 C20orf197Q8N268 126 aa3.14□□□□□ -1.91
LRCH3-218ENST00000493726 PRO2289Q9P1D8 64 aa3.14□□□□□ -1.91
LRCH3-218ENST00000493726 CCDC179H3BU77 68 aa3.12□□□□□ -1.91
LRCH3-218ENST00000493726 R4GN34 69 aa3.11□□□□□ -1.91
LRCH3-218ENST00000493726 SPRR2EP22531 72 aa3.1□□□□□ -1.91
LRCH3-218ENST00000493726 SPRR2BP35325 72 aa3.1□□□□□ -1.91
LRCH3-218ENST00000493726 SPRR2AP35326 72 aa3.1□□□□□ -1.91
LRCH3-218ENST00000493726 PLAC4Q8WY50 150 aa3.09□□□□□ -1.91
LRCH3-218ENST00000493726 KRTAP2-1Q9BYU5 128 aa3.09□□□□□ -1.91
LRCH3-218ENST00000493726 MT-ATP8P03928 68 aa3.08□□□□□ -1.92
LRCH3-218ENST00000493726 M0QZ58 72 aa3.07□□□□□ -1.92
LRCH3-218ENST00000493726 ACYP2P14621 99 aa3.07□□□□□ -1.92
LRCH3-218ENST00000493726 SPRR2FQ96RM1 72 aa3.07□□□□□ -1.92
LRCH3-218ENST00000493726 SERP1Q9Y6X1 66 aa3.05□□□□□ -1.92
LRCH3-218ENST00000493726 KRTAP8-1Q8IUC2 63 aa3.04□□□□□ -1.92
LRCH3-218ENST00000493726 SPANXA2-OT1Q8N9U9 137 aa3.04□□□□□ -1.92
LRCH3-218ENST00000493726 SPTSSBQ8NFR3 76 aa3.02□□□□□ -1.93
LRCH3-218ENST00000493726 SPRR2DP22532 72 aa3□□□□□ -1.93
LRCH3-218ENST00000493726 KRTAP5-8O75690 187 aa2.98□□□□□ -1.93
LRCH3-218ENST00000493726 SERP2Q8N6R1 65 aa2.98□□□□□ -1.93
LRCH3-218ENST00000493726 SNURFQ9Y675 71 aa2.98□□□□□ -1.93
LRCH3-218ENST00000493726 KRTAP13-4Q3LI77 160 aa2.97□□□□□ -1.93
LRCH3-218ENST00000493726 CHKB-CPT1BH3BT56 60 aa2.93□□□□□ -1.94
LRCH3-218ENST00000493726 COX7CP15954 63 aa2.92□□□□□ -1.94
LRCH3-218ENST00000493726 ATP5EP56381 51 aaPredicted RBP2.92□□□□□ -1.94
LRCH3-218ENST00000493726 A0A1B0GU33 70 aa2.9□□□□□ -1.95
LRCH3-218ENST00000493726 ROMO1P60602 79 aa2.9□□□□□ -1.95
LRCH3-218ENST00000493726 COA5Q86WW8 74 aa2.89□□□□□ -1.95
LRCH3-218ENST00000493726 KRTAP19-7Q3SYF9 63 aa2.88□□□□□ -1.95
LRCH3-218ENST00000493726 DSTQ03001 7570 aaKnown RBP2.88□□□□□ -1.95
LRCH3-218ENST00000493726 H7BZZ5 65 aa2.87□□□□□ -1.95
LRCH3-218ENST00000493726 SPINT4Q6UDR6 99 aa2.87□□□□□ -1.95
LRCH3-218ENST00000493726 KRTAP25-1Q3LHN0 102 aa2.86□□□□□ -1.95
LRCH3-218ENST00000493726 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
LRCH3-218ENST00000493726 AHNAK2Q8IVF2 5795 aa2.86□□□□□ -1.95
LRCH3-218ENST00000493726 CYSTM1Q9H1C7 97 aa2.85□□□□□ -1.95
LRCH3-218ENST00000493726 HMCN1Q96RW7 5635 aa2.84□□□□□ -1.95
LRCH3-218ENST00000493726 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
LRCH3-218ENST00000493726 MT1EP04732 61 aa2.83□□□□□ -1.96
LRCH3-218ENST00000493726 KRTAP12-1P59990 96 aa2.82□□□□□ -1.96
LRCH3-218ENST00000493726 MIR22HGQ0VDD5 57 aa2.81□□□□□ -1.96
LRCH3-218ENST00000493726 KRTAP19-3Q7Z4W3 81 aa2.8□□□□□ -1.96
LRCH3-218ENST00000493726 Q1T7F1 81 aa2.79□□□□□ -1.96
LRCH3-218ENST00000493726 SPATA8Q6RVD6 105 aa2.78□□□□□ -1.96
LRCH3-218ENST00000493726 A0A0D9SG42 100 aa2.75□□□□□ -1.97
LRCH3-218ENST00000493726 MT1GP13640 62 aa2.74□□□□□ -1.97
LRCH3-218ENST00000493726 SPRR5A0A1B0GTR4 108 aa2.73□□□□□ -1.97
LRCH3-218ENST00000493726 KRTAP19-5Q3LI72 72 aa2.73□□□□□ -1.97
LRCH3-218ENST00000493726 KRTAP5-10Q6L8G5 202 aa2.73□□□□□ -1.97
LRCH3-218ENST00000493726 A0A1B0GU69 56 aa2.71□□□□□ -1.98
LRCH3-218ENST00000493726 CDC42SE1Q9NRR8 79 aa2.71□□□□□ -1.98
LRCH3-218ENST00000493726 MT1LQ93083 61 aa2.7□□□□□ -1.98
LRCH3-218ENST00000493726 MT1MQ8N339 61 aa2.69□□□□□ -1.98
LRCH3-218ENST00000493726 C10orf95Q9H7T3 257 aa2.69□□□□□ -1.98
LRCH3-218ENST00000493726 MT4P47944 62 aa2.68□□□□□ -1.98
LRCH3-218ENST00000493726 LINC01558Q9Y6Z2 57 aa2.66□□□□□ -1.98
LRCH3-218ENST00000493726 TNP1P09430 55 aa2.63□□□□□ -1.99
LRCH3-218ENST00000493726 PRR15LQ9BU68 103 aa2.61□□□□□ -1.99
LRCH3-218ENST00000493726 UQCR11O14957 56 aa2.56□□□□□ -2
LRCH3-218ENST00000493726 KRTAP12-3P60328 96 aa2.56□□□□□ -2
LRCH3-218ENST00000493726 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
LRCH3-218ENST00000493726 AHNAKQ09666 5890 aaKnown RBP2.47□□□□□ -2.01
LRCH3-218ENST00000493726 INE1O15225 51 aa2.44□□□□□ -2.02
LRCH3-218ENST00000493726 KRTAP20-2Q3LI61 65 aa2.44□□□□□ -2.02
LRCH3-218ENST00000493726 MUC5ACP98088 5654 aa2.41□□□□□ -2.02
LRCH3-218ENST00000493726 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
LRCH3-218ENST00000493726 KRTAP12-4P60329 112 aa2.37□□□□□ -2.03
LRCH3-218ENST00000493726 SYNE1Q8NF91 8797 aaKnown RBP2.33□□□□□ -2.04
LRCH3-218ENST00000493726 MT1AP04731 61 aa2.3□□□□□ -2.04
LRCH3-218ENST00000493726 KRTAP6-1Q3LI64 71 aa2.27□□□□□ -2.05
LRCH3-218ENST00000493726 KRTAP6-2Q3LI66 62 aa2.15□□□□□ -2.07
LRCH3-218ENST00000493726 PHGR1C9JFL3 82 aa1.59□□□□□ -2.15
LRCH3-218ENST00000493726 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
LRCH3-218ENST00000493726 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
LRCH3-218ENST00000493726 PRM1P04553 51 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 33.8 ms