RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 UQCR11O14957 56 aa2.71□□□□□ -1.98
TOP3A-207ENST00000493648 KRTAP2-3P0C7H8 128 aa2.71□□□□□ -1.98
TOP3A-207ENST00000493648 KRTAP12-1P59990 96 aa2.71□□□□□ -1.98
TOP3A-207ENST00000493648 LCE1AQ5T7P2 110 aa2.71□□□□□ -1.98
TOP3A-207ENST00000493648 KRTAP2-4Q9BYR9 128 aa2.71□□□□□ -1.98
TOP3A-207ENST00000493648 KRTAP23-1A1A580 65 aa2.7□□□□□ -1.98
TOP3A-207ENST00000493648 A8MU10 97 aa2.68□□□□□ -1.98
TOP3A-207ENST00000493648 SPRR2DP22532 72 aa2.67□□□□□ -1.98
TOP3A-207ENST00000493648 MIR22HGQ0VDD5 57 aa2.67□□□□□ -1.98
TOP3A-207ENST00000493648 A6NED7 52 aa2.66□□□□□ -1.98
TOP3A-207ENST00000493648 KRTAP2-2Q9BYT5 123 aa2.63□□□□□ -1.99
TOP3A-207ENST00000493648 KRTAP2-1Q9BYU5 128 aa2.63□□□□□ -1.99
TOP3A-207ENST00000493648 TNP1P09430 55 aa2.6□□□□□ -1.99
TOP3A-207ENST00000493648 KRTAP19-7Q3SYF9 63 aa2.6□□□□□ -1.99
TOP3A-207ENST00000493648 C10orf95Q9H7T3 257 aa2.59□□□□□ -1.99
TOP3A-207ENST00000493648 CDC42SE1Q9NRR8 79 aa2.59□□□□□ -1.99
TOP3A-207ENST00000493648 MT1EP04732 61 aa2.58□□□□□ -2
TOP3A-207ENST00000493648 KRTAP19-5Q3LI72 72 aa2.57□□□□□ -2
TOP3A-207ENST00000493648 K7ERS5 55 aa2.56□□□□□ -2
TOP3A-207ENST00000493648 LCE1EQ5T753 118 aa2.56□□□□□ -2
TOP3A-207ENST00000493648 KRTAP19-3Q7Z4W3 81 aa2.56□□□□□ -2
TOP3A-207ENST00000493648 LCE3AQ5TA76 89 aa2.53□□□□□ -2
TOP3A-207ENST00000493648 BRK1Q8WUW1 75 aa2.53□□□□□ -2
TOP3A-207ENST00000493648 MT1GP13640 62 aa2.52□□□□□ -2.01
TOP3A-207ENST00000493648 PP632Q6XCG6 107 aa2.52□□□□□ -2.01
TOP3A-207ENST00000493648 KRTAP25-1Q3LHN0 102 aa2.48□□□□□ -2.01
TOP3A-207ENST00000493648 MT1LQ93083 61 aa2.48□□□□□ -2.01
TOP3A-207ENST00000493648 KRTAP5-1Q6L8H4 278 aa2.47□□□□□ -2.01
TOP3A-207ENST00000493648 MT1MQ8N339 61 aa2.46□□□□□ -2.02
TOP3A-207ENST00000493648 KRTAP12-3P60328 96 aa2.45□□□□□ -2.02
TOP3A-207ENST00000493648 ROMO1P60602 79 aa2.45□□□□□ -2.02
TOP3A-207ENST00000493648 PRO0628Q9UI54 55 aa2.43□□□□□ -2.02
TOP3A-207ENST00000493648 DSTQ03001 7570 aaKnown RBP2.43□□□□□ -2.02
TOP3A-207ENST00000493648 PMAIP1Q13794 54 aa2.42□□□□□ -2.02
TOP3A-207ENST00000493648 KRTAP5-4Q6L8H1 288 aa2.42□□□□□ -2.02
TOP3A-207ENST00000493648 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
TOP3A-207ENST00000493648 KRTAP4-3Q9BYR4 195 aa2.39□□□□□ -2.03
TOP3A-207ENST00000493648 GPR98Q8WXG9 6306 aa2.37□□□□□ -2.03
TOP3A-207ENST00000493648 MT4P47944 62 aa2.32□□□□□ -2.04
TOP3A-207ENST00000493648 LCE3CQ5T5A8 94 aa2.27□□□□□ -2.05
TOP3A-207ENST00000493648 PRAC1Q96KF2 57 aa2.26□□□□□ -2.05
TOP3A-207ENST00000493648 KTN1-AS1Q86SY8 53 aa2.25□□□□□ -2.05
TOP3A-207ENST00000493648 KRTAP5-5Q701N2 237 aaPredicted RBP2.24□□□□□ -2.05
TOP3A-207ENST00000493648 HMCN1Q96RW7 5635 aa2.23□□□□□ -2.05
TOP3A-207ENST00000493648 KRTAP12-4P60329 112 aa2.21□□□□□ -2.06
TOP3A-207ENST00000493648 SPRR5A0A1B0GTR4 108 aa2.19□□□□□ -2.06
TOP3A-207ENST00000493648 KRTAP9-6A8MVA2 160 aa2.18□□□□□ -2.06
TOP3A-207ENST00000493648 KRTAP20-2Q3LI61 65 aa2.18□□□□□ -2.06
TOP3A-207ENST00000493648 MT3P25713 68 aa2.17□□□□□ -2.06
TOP3A-207ENST00000493648 AHNAK2Q8IVF2 5795 aa2.13□□□□□ -2.07
TOP3A-207ENST00000493648 KRTAP5-10Q6L8G5 202 aa2.13□□□□□ -2.07
TOP3A-207ENST00000493648 OBSCNQ5VST9 7968 aa2.12□□□□□ -2.07
TOP3A-207ENST00000493648 MT1AP04731 61 aa2.12□□□□□ -2.07
TOP3A-207ENST00000493648 SVIPQ8NHG7 77 aa2.1□□□□□ -2.07
TOP3A-207ENST00000493648 KRTAP6-1Q3LI64 71 aa2.09□□□□□ -2.07
TOP3A-207ENST00000493648 SYNE1Q8NF91 8797 aaKnown RBP2.07□□□□□ -2.08
TOP3A-207ENST00000493648 KRTAP5-2Q701N4 177 aa2.06□□□□□ -2.08
TOP3A-207ENST00000493648 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
TOP3A-207ENST00000493648 KRTAP6-2Q3LI66 62 aa1.99□□□□□ -2.09
TOP3A-207ENST00000493648 LCE1FQ5T754 118 aa1.94□□□□□ -2.1
TOP3A-207ENST00000493648 KRTAP5-8O75690 187 aa1.9□□□□□ -2.11
TOP3A-207ENST00000493648 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
TOP3A-207ENST00000493648 LUZP6Q538Z0 58 aa1.85□□□□□ -2.11
TOP3A-207ENST00000493648 MUC5ACP98088 5654 aa1.79□□□□□ -2.12
TOP3A-207ENST00000493648 MUC5BQ9HC84 5762 aaPredicted RBP1.74□□□□□ -2.13
TOP3A-207ENST00000493648 NDUFAF8A1L188 74 aa1.73□□□□□ -2.13
TOP3A-207ENST00000493648 LCE3EQ5T5B0 92 aa1.67□□□□□ -2.14
TOP3A-207ENST00000493648 LCE1BQ5T7P3 118 aa1.67□□□□□ -2.14
TOP3A-207ENST00000493648 LCE3DQ9BYE3 92 aa1.66□□□□□ -2.14
TOP3A-207ENST00000493648 LCE1CQ5T751 118 aa1.65□□□□□ -2.15
TOP3A-207ENST00000493648 A0A0A0MQY5 61 aa1.48□□□□□ -2.17
TOP3A-207ENST00000493648 INE1O15225 51 aa1.42□□□□□ -2.18
TOP3A-207ENST00000493648 MUC19Q7Z5P9 8384 aa1.41□□□□□ -2.18
TOP3A-207ENST00000493648 KRTAP21-2Q3LI59 83 aa1.38□□□□□ -2.19
TOP3A-207ENST00000493648 PHGR1C9JFL3 82 aa1.27□□□□□ -2.21
TOP3A-207ENST00000493648 PRM1P04553 51 aa1.26□□□□□ -2.21
TOP3A-207ENST00000493648 KRTAP21-1Q3LI58 79 aa0.98□□□□□ -2.25
TOP3A-207ENST00000493648 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 176.7 ms