RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 CSAG1Q6PB30 78 aa1.14□□□□□ -2.23
PTCD3-218ENST00000493430 LINC00208Q96KT6 92 aa1.13□□□□□ -2.23
PTCD3-218ENST00000493430 GTF2H5Q6ZYL4 71 aa1.11□□□□□ -2.23
PTCD3-218ENST00000493430 LOC101927531A0A1B0GV80 90 aa1.1□□□□□ -2.23
PTCD3-218ENST00000493430 F8W1H4 67 aa1.1□□□□□ -2.23
PTCD3-218ENST00000493430 M0QZ58 72 aa1.1□□□□□ -2.23
PTCD3-218ENST00000493430 ROMO1P60602 79 aa1.1□□□□□ -2.23
PTCD3-218ENST00000493430 Q1T7F1 81 aa1.1□□□□□ -2.23
PTCD3-218ENST00000493430 KRTAP8-1Q8IUC2 63 aa1.1□□□□□ -2.23
PTCD3-218ENST00000493430 SPRR2DP22532 72 aa1.09□□□□□ -2.23
PTCD3-218ENST00000493430 TP53AIP1Q9HCN2 124 aa1.09□□□□□ -2.23
PTCD3-218ENST00000493430 UQCRQO14949 82 aa1.08□□□□□ -2.24
PTCD3-218ENST00000493430 NDUFC1O43677 76 aa1.08□□□□□ -2.24
PTCD3-218ENST00000493430 MT-ATP8P03928 68 aa1.08□□□□□ -2.24
PTCD3-218ENST00000493430 BRK1Q8WUW1 75 aa1.08□□□□□ -2.24
PTCD3-218ENST00000493430 SNURFQ9Y675 71 aa1.08□□□□□ -2.24
PTCD3-218ENST00000493430 ACYP1P07311 99 aa1.07□□□□□ -2.24
PTCD3-218ENST00000493430 KRTAP2-3P0C7H8 128 aa1.07□□□□□ -2.24
PTCD3-218ENST00000493430 LINC00643Q86TS7 51 aa1.07□□□□□ -2.24
PTCD3-218ENST00000493430 DMAC1Q96GE9 116 aa1.07□□□□□ -2.24
PTCD3-218ENST00000493430 KRTAP2-4Q9BYR9 128 aa1.07□□□□□ -2.24
PTCD3-218ENST00000493430 MDN1Q9NU22 5596 aa1.06□□□□□ -2.24
PTCD3-218ENST00000493430 ATP5EP2Q5VTU8 51 aa1.06□□□□□ -2.24
PTCD3-218ENST00000493430 COA5Q86WW8 74 aa1.06□□□□□ -2.24
PTCD3-218ENST00000493430 CYSTM1Q9H1C7 97 aa1.06□□□□□ -2.24
PTCD3-218ENST00000493430 H0YAA0 97 aa1.05□□□□□ -2.24
PTCD3-218ENST00000493430 PLAC4Q8WY50 150 aa1.05□□□□□ -2.24
PTCD3-218ENST00000493430 A0A0D9SG42 100 aa1.04□□□□□ -2.24
PTCD3-218ENST00000493430 J3QR89 54 aa1.04□□□□□ -2.24
PTCD3-218ENST00000493430 ATOX1O00244 68 aa1.04□□□□□ -2.24
PTCD3-218ENST00000493430 KRTAP19-7Q3SYF9 63 aa1.04□□□□□ -2.24
PTCD3-218ENST00000493430 CRIPTQ9P021 101 aa1.04□□□□□ -2.24
PTCD3-218ENST00000493430 SPATA8Q6RVD6 105 aa1.03□□□□□ -2.24
PTCD3-218ENST00000493430 KRTAP2-1Q9BYU5 128 aa1.03□□□□□ -2.24
PTCD3-218ENST00000493430 MT1EP04732 61 aa1.02□□□□□ -2.25
PTCD3-218ENST00000493430 C20orf197Q8N268 126 aa1.02□□□□□ -2.25
PTCD3-218ENST00000493430 MT4P47944 62 aa1.01□□□□□ -2.25
PTCD3-218ENST00000493430 KRTAP19-5Q3LI72 72 aa1.01□□□□□ -2.25
PTCD3-218ENST00000493430 CHKB-CPT1BH3BT56 60 aa1□□□□□ -2.25
PTCD3-218ENST00000493430 K7ERU9 68 aa1□□□□□ -2.25
PTCD3-218ENST00000493430 COX7CP15954 63 aa1□□□□□ -2.25
PTCD3-218ENST00000493430 MIR22HGQ0VDD5 57 aa1□□□□□ -2.25
PTCD3-218ENST00000493430 KRTAP12-1P59990 96 aa0.99□□□□□ -2.25
PTCD3-218ENST00000493430 INE1O15225 51 aa0.98□□□□□ -2.25
PTCD3-218ENST00000493430 ACYP2P14621 99 aa0.98□□□□□ -2.25
PTCD3-218ENST00000493430 KRTAP19-3Q7Z4W3 81 aa0.98□□□□□ -2.25
PTCD3-218ENST00000493430 MT1MQ8N339 61 aa0.98□□□□□ -2.25
PTCD3-218ENST00000493430 CDC42SE1Q9NRR8 79 aa0.98□□□□□ -2.25
PTCD3-218ENST00000493430 DSTQ03001 7570 aaKnown RBP0.98□□□□□ -2.25
PTCD3-218ENST00000493430 MT1LQ93083 61 aa0.97□□□□□ -2.25
PTCD3-218ENST00000493430 C10orf95Q9H7T3 257 aa0.97□□□□□ -2.25
PTCD3-218ENST00000493430 GPR98Q8WXG9 6306 aa0.97□□□□□ -2.25
PTCD3-218ENST00000493430 CCDC179H3BU77 68 aa0.95□□□□□ -2.26
PTCD3-218ENST00000493430 H7BZZ5 65 aa0.95□□□□□ -2.26
PTCD3-218ENST00000493430 SERP2Q8N6R1 65 aa0.95□□□□□ -2.26
PTCD3-218ENST00000493430 AHNAK2Q8IVF2 5795 aa0.93□□□□□ -2.26
PTCD3-218ENST00000493430 MT1GP13640 62 aa0.92□□□□□ -2.26
PTCD3-218ENST00000493430 SPTSSBQ8NFR3 76 aa0.92□□□□□ -2.26
PTCD3-218ENST00000493430 KRTAP5-10Q6L8G5 202 aa0.91□□□□□ -2.26
PTCD3-218ENST00000493430 A0A1B0GU69 56 aa0.9□□□□□ -2.27
PTCD3-218ENST00000493430 SYNE1Q8NF91 8797 aaKnown RBP0.9□□□□□ -2.27
PTCD3-218ENST00000493430 KRTAP20-2Q3LI61 65 aa0.89□□□□□ -2.27
PTCD3-218ENST00000493430 SERP1Q9Y6X1 66 aa0.89□□□□□ -2.27
PTCD3-218ENST00000493430 TNP1P09430 55 aa0.87□□□□□ -2.27
PTCD3-218ENST00000493430 PRR15LQ9BU68 103 aa0.87□□□□□ -2.27
PTCD3-218ENST00000493430 KRTAP6-1Q3LI64 71 aa0.85□□□□□ -2.27
PTCD3-218ENST00000493430 LINC01558Q9Y6Z2 57 aa0.84□□□□□ -2.27
PTCD3-218ENST00000493430 MT1AP04731 61 aa0.81□□□□□ -2.28
PTCD3-218ENST00000493430 KRTAP6-2Q3LI66 62 aa0.81□□□□□ -2.28
PTCD3-218ENST00000493430 UQCR11O14957 56 aa0.79□□□□□ -2.28
PTCD3-218ENST00000493430 ATP5EP56381 51 aaPredicted RBP0.79□□□□□ -2.28
PTCD3-218ENST00000493430 AHNAKQ09666 5890 aaKnown RBP0.77□□□□□ -2.29
PTCD3-218ENST00000493430 MUC5ACP98088 5654 aa0.75□□□□□ -2.29
PTCD3-218ENST00000493430 MUC5BQ9HC84 5762 aaPredicted RBP0.74□□□□□ -2.29
PTCD3-218ENST00000493430 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
PTCD3-218ENST00000493430 PHGR1C9JFL3 82 aa0.54□□□□□ -2.32
PTCD3-218ENST00000493430 PRM1P04553 51 aa0.44□□□□□ -2.34
PTCD3-218ENST00000493430 KRTAP21-1Q3LI58 79 aa0.34□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 221.2 ms