RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 M0QZ58 72 aa3.02□□□□□ -1.93
TPR-208ENST00000492973 KRTAP19-8Q3LI54 63 aa3.02□□□□□ -1.93
TPR-208ENST00000492973 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
TPR-208ENST00000492973 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
TPR-208ENST00000492973 SPATA8Q6RVD6 105 aa3.01□□□□□ -1.93
TPR-208ENST00000492973 R4GN34 69 aa3.01□□□□□ -1.93
TPR-208ENST00000492973 UQCR11O14957 56 aa3□□□□□ -1.93
TPR-208ENST00000492973 MT1BP07438 61 aa3□□□□□ -1.93
TPR-208ENST00000492973 PP632Q6XCG6 107 aa2.98□□□□□ -1.93
TPR-208ENST00000492973 A6NED7 52 aa2.97□□□□□ -1.93
TPR-208ENST00000492973 KRTAP19-6Q3LI70 58 aa2.97□□□□□ -1.93
TPR-208ENST00000492973 MIR22HGQ0VDD5 57 aa2.96□□□□□ -1.94
TPR-208ENST00000492973 LINC01554Q52M75 96 aa2.95□□□□□ -1.94
TPR-208ENST00000492973 A0A0D9SG42 100 aa2.94□□□□□ -1.94
TPR-208ENST00000492973 SPRR5A0A1B0GTR4 108 aa2.94□□□□□ -1.94
TPR-208ENST00000492973 A6NN06 94 aa2.92□□□□□ -1.94
TPR-208ENST00000492973 KRTAP12-1P59990 96 aa2.91□□□□□ -1.94
TPR-208ENST00000492973 KRTAP5-2Q701N4 177 aa2.91□□□□□ -1.94
TPR-208ENST00000492973 CDC42SE1Q9NRR8 79 aa2.91□□□□□ -1.94
TPR-208ENST00000492973 KRTAP6-3Q3LI67 103 aa2.88□□□□□ -1.95
TPR-208ENST00000492973 SPINT4Q6UDR6 99 aa2.88□□□□□ -1.95
TPR-208ENST00000492973 PLAC4Q8WY50 150 aa2.88□□□□□ -1.95
TPR-208ENST00000492973 BRK1Q8WUW1 75 aa2.87□□□□□ -1.95
TPR-208ENST00000492973 MT1XP80297 61 aa2.85□□□□□ -1.95
TPR-208ENST00000492973 CAMK2N1Q7Z7J9 78 aa2.84□□□□□ -1.95
TPR-208ENST00000492973 KMT2DO14686 5537 aa2.83□□□□□ -1.96
TPR-208ENST00000492973 K7ERS5 55 aa2.82□□□□□ -1.96
TPR-208ENST00000492973 MUC12Q9UKN1 5478 aa2.79□□□□□ -1.96
TPR-208ENST00000492973 PRO2289Q9P1D8 64 aa2.78□□□□□ -1.96
TPR-208ENST00000492973 PRO0628Q9UI54 55 aa2.78□□□□□ -1.96
TPR-208ENST00000492973 KRTAP2-3P0C7H8 128 aa2.77□□□□□ -1.97
TPR-208ENST00000492973 KRTAP2-4Q9BYR9 128 aa2.77□□□□□ -1.97
TPR-208ENST00000492973 C10orf95Q9H7T3 257 aa2.77□□□□□ -1.97
TPR-208ENST00000492973 PMAIP1Q13794 54 aa2.73□□□□□ -1.97
TPR-208ENST00000492973 ROMO1P60602 79 aa2.72□□□□□ -1.97
TPR-208ENST00000492973 MDN1Q9NU22 5596 aa2.69□□□□□ -1.98
TPR-208ENST00000492973 AHNAK2Q8IVF2 5795 aa2.69□□□□□ -1.98
TPR-208ENST00000492973 TNP1P09430 55 aa2.67□□□□□ -1.98
TPR-208ENST00000492973 KRTAP25-1Q3LHN0 102 aa2.66□□□□□ -1.98
TPR-208ENST00000492973 KRTAP8-1Q8IUC2 63 aa2.64□□□□□ -1.99
TPR-208ENST00000492973 KRTAP2-1Q9BYU5 128 aa2.62□□□□□ -1.99
TPR-208ENST00000492973 SPRR2FQ96RM1 72 aa2.6□□□□□ -1.99
TPR-208ENST00000492973 KTN1-AS1Q86SY8 53 aa2.57□□□□□ -2
TPR-208ENST00000492973 KRTAP19-7Q3SYF9 63 aa2.55□□□□□ -2
TPR-208ENST00000492973 SPRR2EP22531 72 aa2.53□□□□□ -2
TPR-208ENST00000492973 SPRR2BP35325 72 aa2.53□□□□□ -2
TPR-208ENST00000492973 SPRR2AP35326 72 aa2.53□□□□□ -2
TPR-208ENST00000492973 KRTAP5-7Q6L8G8 165 aa2.52□□□□□ -2.01
TPR-208ENST00000492973 MT1EP04732 61 aa2.51□□□□□ -2.01
TPR-208ENST00000492973 KRTAP19-5Q3LI72 72 aa2.51□□□□□ -2.01
TPR-208ENST00000492973 DSTQ03001 7570 aaKnown RBP2.5□□□□□ -2.01
TPR-208ENST00000492973 KRTAP12-3P60328 96 aa2.48□□□□□ -2.01
TPR-208ENST00000492973 AHNAKQ09666 5890 aaKnown RBP2.47□□□□□ -2.01
TPR-208ENST00000492973 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
TPR-208ENST00000492973 SPRR2DP22532 72 aa2.44□□□□□ -2.02
TPR-208ENST00000492973 KRTAP19-3Q7Z4W3 81 aa2.44□□□□□ -2.02
TPR-208ENST00000492973 HMCN1Q96RW7 5635 aa2.43□□□□□ -2.02
TPR-208ENST00000492973 MT1LQ93083 61 aa2.42□□□□□ -2.02
TPR-208ENST00000492973 KRTAP5-10Q6L8G5 202 aa2.41□□□□□ -2.02
TPR-208ENST00000492973 MT1GP13640 62 aa2.4□□□□□ -2.03
TPR-208ENST00000492973 MT1MQ8N339 61 aa2.37□□□□□ -2.03
TPR-208ENST00000492973 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
TPR-208ENST00000492973 KRTAP5-8O75690 187 aa2.34□□□□□ -2.03
TPR-208ENST00000492973 KRTAP12-4P60329 112 aa2.26□□□□□ -2.05
TPR-208ENST00000492973 MUC5ACP98088 5654 aa2.24□□□□□ -2.05
TPR-208ENST00000492973 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
TPR-208ENST00000492973 SYNE1Q8NF91 8797 aaKnown RBP2.13□□□□□ -2.07
TPR-208ENST00000492973 MT4P47944 62 aa2.12□□□□□ -2.07
TPR-208ENST00000492973 LUZP6Q538Z0 58 aa2.08□□□□□ -2.08
TPR-208ENST00000492973 MT1AP04731 61 aa2.06□□□□□ -2.08
TPR-208ENST00000492973 KRTAP6-1Q3LI64 71 aa2.05□□□□□ -2.08
TPR-208ENST00000492973 KRTAP20-2Q3LI61 65 aa2.04□□□□□ -2.08
TPR-208ENST00000492973 KRTAP6-2Q3LI66 62 aa1.92□□□□□ -2.1
TPR-208ENST00000492973 INE1O15225 51 aa1.64□□□□□ -2.15
TPR-208ENST00000492973 PHGR1C9JFL3 82 aa1.48□□□□□ -2.17
TPR-208ENST00000492973 PRM1P04553 51 aa1.41□□□□□ -2.18
TPR-208ENST00000492973 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
TPR-208ENST00000492973 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 5.9 ms