RNA–Protein interactions for RNA: ENST00000492819.1

CCDC12-206, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-206ENST00000492819 HMCN1Q96RW7 5635 aa6.28□□□□□ -1.4
CCDC12-206ENST00000492819 C10orf95Q9H7T3 257 aa6.26□□□□□ -1.41
CCDC12-206ENST00000492819 PRO0628Q9UI54 55 aa6.26□□□□□ -1.41
CCDC12-206ENST00000492819 AHNAK2Q8IVF2 5795 aa6.25□□□□□ -1.41
CCDC12-206ENST00000492819 MIR22HGQ0VDD5 57 aa6.25□□□□□ -1.41
CCDC12-206ENST00000492819 MT4P47944 62 aa6.18□□□□□ -1.42
CCDC12-206ENST00000492819 BRK1Q8WUW1 75 aa6.18□□□□□ -1.42
CCDC12-206ENST00000492819 TNP1P09430 55 aa6.13□□□□□ -1.43
CCDC12-206ENST00000492819 LCE4AQ5TA78 99 aa6.13□□□□□ -1.43
CCDC12-206ENST00000492819 MT1GP13640 62 aa6.09□□□□□ -1.43
CCDC12-206ENST00000492819 KRTAP19-5Q3LI72 72 aa6.08□□□□□ -1.44
CCDC12-206ENST00000492819 KRTAP5-10Q6L8G5 202 aa6.08□□□□□ -1.44
CCDC12-206ENST00000492819 A6NED7 52 aa6.06□□□□□ -1.44
CCDC12-206ENST00000492819 LCE3AQ5TA76 89 aa6.05□□□□□ -1.44
CCDC12-206ENST00000492819 MT1MQ8N339 61 aa6.04□□□□□ -1.44
CCDC12-206ENST00000492819 K7ERS5 55 aa6.03□□□□□ -1.44
CCDC12-206ENST00000492819 KRTAP5-4Q6L8H1 288 aa6□□□□□ -1.45
CCDC12-206ENST00000492819 KRTAP4-6Q9BYQ5 205 aa6□□□□□ -1.45
CCDC12-206ENST00000492819 KRTAP4-3Q9BYR4 195 aa5.99□□□□□ -1.45
CCDC12-206ENST00000492819 CDC42SE1Q9NRR8 79 aa5.99□□□□□ -1.45
CCDC12-206ENST00000492819 PP632Q6XCG6 107 aa5.98□□□□□ -1.45
CCDC12-206ENST00000492819 MT1LQ93083 61 aa5.96□□□□□ -1.46
CCDC12-206ENST00000492819 KRTAP25-1Q3LHN0 102 aa5.93□□□□□ -1.46
CCDC12-206ENST00000492819 PMAIP1Q13794 54 aa5.88□□□□□ -1.47
CCDC12-206ENST00000492819 KRTAP5-7Q6L8G8 165 aa5.87□□□□□ -1.47
CCDC12-206ENST00000492819 KRTAP5-3Q6L8H2 238 aa5.83□□□□□ -1.48
CCDC12-206ENST00000492819 KRTAP12-3P60328 96 aa5.81□□□□□ -1.48
CCDC12-206ENST00000492819 KRTAP23-1A1A580 65 aa5.76□□□□□ -1.49
CCDC12-206ENST00000492819 KTN1-AS1Q86SY8 53 aa5.75□□□□□ -1.49
CCDC12-206ENST00000492819 ROMO1P60602 79 aa5.73□□□□□ -1.49
CCDC12-206ENST00000492819 KRTAP4-7Q9BYR0 210 aa5.72□□□□□ -1.49
CCDC12-206ENST00000492819 KRTAP20-2Q3LI61 65 aa5.69□□□□□ -1.5
CCDC12-206ENST00000492819 SPRR5A0A1B0GTR4 108 aa5.6□□□□□ -1.51
CCDC12-206ENST00000492819 KRTAP5-5Q701N2 237 aaPredicted RBP5.59□□□□□ -1.51
CCDC12-206ENST00000492819 SYNE1Q8NF91 8797 aaKnown RBP5.53□□□□□ -1.52
CCDC12-206ENST00000492819 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
CCDC12-206ENST00000492819 KRTAP19-4Q3LI73 84 aa5.52□□□□□ -1.53
CCDC12-206ENST00000492819 KRTAP12-4P60329 112 aa5.45□□□□□ -1.54
CCDC12-206ENST00000492819 LOC100996750A0A140TA64 210 aa5.44□□□□□ -1.54
CCDC12-206ENST00000492819 LCE3CQ5T5A8 94 aa5.39□□□□□ -1.55
CCDC12-206ENST00000492819 PRAC1Q96KF2 57 aa5.34□□□□□ -1.55
CCDC12-206ENST00000492819 KRTAP4-11Q9BYQ6 195 aa5.28□□□□□ -1.56
CCDC12-206ENST00000492819 AHNAKQ09666 5890 aaKnown RBP5.21□□□□□ -1.58
CCDC12-206ENST00000492819 KRTAP5-2Q701N4 177 aa5.19□□□□□ -1.58
CCDC12-206ENST00000492819 MUC5BQ9HC84 5762 aaPredicted RBP5.18□□□□□ -1.58
CCDC12-206ENST00000492819 MUC5ACP98088 5654 aa5.17□□□□□ -1.58
CCDC12-206ENST00000492819 KRTAP5-8O75690 187 aa5.14□□□□□ -1.59
CCDC12-206ENST00000492819 KRTAP9-6A8MVA2 160 aa5.12□□□□□ -1.59
CCDC12-206ENST00000492819 KRTAP6-1Q3LI64 71 aa5.09□□□□□ -1.59
CCDC12-206ENST00000492819 MT1AP04731 61 aa5.04□□□□□ -1.6
CCDC12-206ENST00000492819 OBSCNQ5VST9 7968 aa5.03□□□□□ -1.6
CCDC12-206ENST00000492819 KRTAP6-2Q3LI66 62 aa4.92□□□□□ -1.62
CCDC12-206ENST00000492819 KRTAP9-4Q9BYQ2 154 aa4.91□□□□□ -1.62
CCDC12-206ENST00000492819 KRTAP9-9Q9BYP9 154 aa4.88□□□□□ -1.63
CCDC12-206ENST00000492819 KRTAP5-1Q6L8H4 278 aa4.75□□□□□ -1.65
CCDC12-206ENST00000492819 MT3P25713 68 aa4.59□□□□□ -1.67
CCDC12-206ENST00000492819 LUZP6Q538Z0 58 aa4.5□□□□□ -1.69
CCDC12-206ENST00000492819 NDUFAF8A1L188 74 aa4.48□□□□□ -1.69
CCDC12-206ENST00000492819 H3BS24 57 aa4.48□□□□□ -1.69
CCDC12-206ENST00000492819 LCE1EQ5T753 118 aa4.31□□□□□ -1.72
CCDC12-206ENST00000492819 KRTAP4-2Q9BYR5 136 aa4.2□□□□□ -1.74
CCDC12-206ENST00000492819 A0A0A0MQY5 61 aa4.18□□□□□ -1.74
CCDC12-206ENST00000492819 LCE1BQ5T7P3 118 aa4.14□□□□□ -1.75
CCDC12-206ENST00000492819 LCE1CQ5T751 118 aa4.02□□□□□ -1.77
CCDC12-206ENST00000492819 KRTAP4-12Q9BQ66 201 aa3.98□□□□□ -1.77
CCDC12-206ENST00000492819 LCE3DQ9BYE3 92 aa3.92□□□□□ -1.78
CCDC12-206ENST00000492819 INE1O15225 51 aa3.86□□□□□ -1.79
CCDC12-206ENST00000492819 LCE3EQ5T5B0 92 aa3.74□□□□□ -1.81
CCDC12-206ENST00000492819 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
CCDC12-206ENST00000492819 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
CCDC12-206ENST00000492819 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.61□□□□□ -1.83
CCDC12-206ENST00000492819 PHGR1C9JFL3 82 aa3.53□□□□□ -1.84
CCDC12-206ENST00000492819 KRTAP21-2Q3LI59 83 aa3.36□□□□□ -1.87
CCDC12-206ENST00000492819 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
CCDC12-206ENST00000492819 MUC19Q7Z5P9 8384 aa3.14□□□□□ -1.91
CCDC12-206ENST00000492819 PRM1P04553 51 aa2.94□□□□□ -1.94
CCDC12-206ENST00000492819 KRTAP21-1Q3LI58 79 aa2.65□□□□□ -1.99
CCDC12-206ENST00000492819 MUC16Q8WXI7 14507 aa2.2□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 6.7 ms