RNA–Protein interactions for RNA: ENST00000491915.1

COL6A4P1-203, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 5

Gene COL6A4P1, Length 1,251 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-203ENST00000491915 KRTAP25-1Q3LHN0 102 aa3.4□□□□□ -1.87
COL6A4P1-203ENST00000491915 SPATA8Q6RVD6 105 aa3.4□□□□□ -1.87
COL6A4P1-203ENST00000491915 A0A0D9SG42 100 aa3.39□□□□□ -1.87
COL6A4P1-203ENST00000491915 LCE3BQ5TA77 95 aa3.38□□□□□ -1.87
COL6A4P1-203ENST00000491915 LINC01558Q9Y6Z2 57 aa3.37□□□□□ -1.87
COL6A4P1-203ENST00000491915 KRTAP19-7Q3SYF9 63 aa3.36□□□□□ -1.87
COL6A4P1-203ENST00000491915 KRTAP12-1P59990 96 aa3.34□□□□□ -1.87
COL6A4P1-203ENST00000491915 SPINT4Q6UDR6 99 aa3.34□□□□□ -1.87
COL6A4P1-203ENST00000491915 UQCR11O14957 56 aa3.33□□□□□ -1.88
COL6A4P1-203ENST00000491915 MT1EP04732 61 aa3.32□□□□□ -1.88
COL6A4P1-203ENST00000491915 LCE5AQ5TCM9 118 aa3.3□□□□□ -1.88
COL6A4P1-203ENST00000491915 GPR98Q8WXG9 6306 aa3.3□□□□□ -1.88
COL6A4P1-203ENST00000491915 KRTAP15-1Q3LI76 137 aa3.28□□□□□ -1.88
COL6A4P1-203ENST00000491915 KRTAP19-5Q3LI72 72 aa3.27□□□□□ -1.89
COL6A4P1-203ENST00000491915 KRTAP19-3Q7Z4W3 81 aa3.27□□□□□ -1.89
COL6A4P1-203ENST00000491915 A0A1B0GU69 56 aa3.26□□□□□ -1.89
COL6A4P1-203ENST00000491915 C10orf95Q9H7T3 257 aa3.23□□□□□ -1.89
COL6A4P1-203ENST00000491915 MT1GP13640 62 aa3.21□□□□□ -1.9
COL6A4P1-203ENST00000491915 DSTQ03001 7570 aaKnown RBP3.2□□□□□ -1.9
COL6A4P1-203ENST00000491915 KRTAP4-9Q9BYQ8 210 aa3.19□□□□□ -1.9
COL6A4P1-203ENST00000491915 LCE3AQ5TA76 89 aa3.17□□□□□ -1.9
COL6A4P1-203ENST00000491915 MT1LQ93083 61 aa3.17□□□□□ -1.9
COL6A4P1-203ENST00000491915 MT1MQ8N339 61 aa3.16□□□□□ -1.9
COL6A4P1-203ENST00000491915 LOC100996750A0A140TA64 210 aa3.14□□□□□ -1.91
COL6A4P1-203ENST00000491915 TNP1P09430 55 aa3.14□□□□□ -1.91
COL6A4P1-203ENST00000491915 KRTAP4-6Q9BYQ5 205 aa3.14□□□□□ -1.91
COL6A4P1-203ENST00000491915 KRTAP4-3Q9BYR4 195 aa3.14□□□□□ -1.91
COL6A4P1-203ENST00000491915 PP632Q6XCG6 107 aa3.12□□□□□ -1.91
COL6A4P1-203ENST00000491915 LCE1DQ5T752 114 aa3.08□□□□□ -1.92
COL6A4P1-203ENST00000491915 KRTAP4-7Q9BYR0 210 aa3.07□□□□□ -1.92
COL6A4P1-203ENST00000491915 LCE4AQ5TA78 99 aa3.06□□□□□ -1.92
COL6A4P1-203ENST00000491915 MT4P47944 62 aa3.05□□□□□ -1.92
COL6A4P1-203ENST00000491915 KRTAP12-3P60328 96 aa3.04□□□□□ -1.92
COL6A4P1-203ENST00000491915 INE1O15225 51 aa3.03□□□□□ -1.92
COL6A4P1-203ENST00000491915 KRTAP5-4Q6L8H1 288 aa3.02□□□□□ -1.93
COL6A4P1-203ENST00000491915 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
COL6A4P1-203ENST00000491915 HMCN1Q96RW7 5635 aa2.91□□□□□ -1.94
COL6A4P1-203ENST00000491915 KRTAP5-5Q701N2 237 aaPredicted RBP2.9□□□□□ -1.95
COL6A4P1-203ENST00000491915 KRTAP5-10Q6L8G5 202 aa2.87□□□□□ -1.95
COL6A4P1-203ENST00000491915 KRTAP20-2Q3LI61 65 aa2.85□□□□□ -1.95
COL6A4P1-203ENST00000491915 KRTAP9-4Q9BYQ2 154 aa2.85□□□□□ -1.95
COL6A4P1-203ENST00000491915 AHNAK2Q8IVF2 5795 aa2.84□□□□□ -1.95
COL6A4P1-203ENST00000491915 SYNE1Q8NF91 8797 aaKnown RBP2.83□□□□□ -1.96
COL6A4P1-203ENST00000491915 SPRR5A0A1B0GTR4 108 aa2.81□□□□□ -1.96
COL6A4P1-203ENST00000491915 KRTAP5-3Q6L8H2 238 aa2.81□□□□□ -1.96
COL6A4P1-203ENST00000491915 LCE3CQ5T5A8 94 aa2.8□□□□□ -1.96
COL6A4P1-203ENST00000491915 KRTAP9-9Q9BYP9 154 aa2.8□□□□□ -1.96
COL6A4P1-203ENST00000491915 KRTAP12-4P60329 112 aa2.79□□□□□ -1.96
COL6A4P1-203ENST00000491915 KRTAP5-7Q6L8G8 165 aa2.77□□□□□ -1.97
COL6A4P1-203ENST00000491915 KRTAP9-6A8MVA2 160 aa2.7□□□□□ -1.98
COL6A4P1-203ENST00000491915 KRTAP6-1Q3LI64 71 aa2.7□□□□□ -1.98
COL6A4P1-203ENST00000491915 MT1AP04731 61 aa2.69□□□□□ -1.98
COL6A4P1-203ENST00000491915 KRTAP5-2Q701N4 177 aa2.65□□□□□ -1.99
COL6A4P1-203ENST00000491915 KRTAP4-11Q9BYQ6 195 aa2.61□□□□□ -1.99
COL6A4P1-203ENST00000491915 MT3P25713 68 aa2.58□□□□□ -2
COL6A4P1-203ENST00000491915 KRTAP6-2Q3LI66 62 aa2.57□□□□□ -2
COL6A4P1-203ENST00000491915 KRTAP5-8O75690 187 aa2.54□□□□□ -2
COL6A4P1-203ENST00000491915 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
COL6A4P1-203ENST00000491915 LCE1FQ5T754 118 aa2.44□□□□□ -2.02
COL6A4P1-203ENST00000491915 KRTAP4-2Q9BYR5 136 aa2.43□□□□□ -2.02
COL6A4P1-203ENST00000491915 OBSCNQ5VST9 7968 aa2.42□□□□□ -2.02
COL6A4P1-203ENST00000491915 KRTAP5-1Q6L8H4 278 aa2.39□□□□□ -2.03
COL6A4P1-203ENST00000491915 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
COL6A4P1-203ENST00000491915 MUC5ACP98088 5654 aa2.37□□□□□ -2.03
COL6A4P1-203ENST00000491915 LCE1EQ5T753 118 aa2.25□□□□□ -2.05
COL6A4P1-203ENST00000491915 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.07
COL6A4P1-203ENST00000491915 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
COL6A4P1-203ENST00000491915 LCE3EQ5T5B0 92 aa2.06□□□□□ -2.08
COL6A4P1-203ENST00000491915 LCE3DQ9BYE3 92 aa2.01□□□□□ -2.09
COL6A4P1-203ENST00000491915 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.11
COL6A4P1-203ENST00000491915 KRTAP5-11Q6L8G4 156 aa1.88□□□□□ -2.11
COL6A4P1-203ENST00000491915 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
COL6A4P1-203ENST00000491915 KRTAP4-4Q9BYR3 166 aa1.67□□□□□ -2.14
COL6A4P1-203ENST00000491915 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
COL6A4P1-203ENST00000491915 MUC19Q7Z5P9 8384 aa1.54□□□□□ -2.16
COL6A4P1-203ENST00000491915 PRM1P04553 51 aa1.52□□□□□ -2.17
COL6A4P1-203ENST00000491915 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
COL6A4P1-203ENST00000491915 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 47.9 ms