RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 KRTAP10-12P60413 245 aa4.37□□□□□ -1.71
TMEM39A-211ENST00000491685 TNP1P09430 55 aa4.29□□□□□ -1.72
TMEM39A-211ENST00000491685 ROMO1P60602 79 aa4.29□□□□□ -1.72
TMEM39A-211ENST00000491685 PMAIP1Q13794 54 aa4.29□□□□□ -1.72
TMEM39A-211ENST00000491685 KRTAP25-1Q3LHN0 102 aa4.28□□□□□ -1.72
TMEM39A-211ENST00000491685 DSTQ03001 7570 aaKnown RBP4.28□□□□□ -1.72
TMEM39A-211ENST00000491685 KRTAP23-1A1A580 65 aa4.25□□□□□ -1.73
TMEM39A-211ENST00000491685 C10orf95Q9H7T3 257 aa4.25□□□□□ -1.73
TMEM39A-211ENST00000491685 KRTAP4-9Q9BYQ8 210 aa4.21□□□□□ -1.74
TMEM39A-211ENST00000491685 PP632Q6XCG6 107 aa4.18□□□□□ -1.74
TMEM39A-211ENST00000491685 KRTAP19-7Q3SYF9 63 aa4.15□□□□□ -1.75
TMEM39A-211ENST00000491685 LCE5AQ5TCM9 118 aa4.12□□□□□ -1.75
TMEM39A-211ENST00000491685 MT1EP04732 61 aa4.11□□□□□ -1.75
TMEM39A-211ENST00000491685 LCE1DQ5T752 114 aa4.09□□□□□ -1.75
TMEM39A-211ENST00000491685 KTN1-AS1Q86SY8 53 aa4.09□□□□□ -1.75
TMEM39A-211ENST00000491685 HMCN1Q96RW7 5635 aa4.09□□□□□ -1.75
TMEM39A-211ENST00000491685 KRTAP19-3Q7Z4W3 81 aa4.08□□□□□ -1.76
TMEM39A-211ENST00000491685 AHNAK2Q8IVF2 5795 aa4.06□□□□□ -1.76
TMEM39A-211ENST00000491685 LCE3AQ5TA76 89 aa4.05□□□□□ -1.76
TMEM39A-211ENST00000491685 KRTAP5-10Q6L8G5 202 aa4.03□□□□□ -1.76
TMEM39A-211ENST00000491685 KRTAP19-5Q3LI72 72 aa4.02□□□□□ -1.77
TMEM39A-211ENST00000491685 KRTAP19-4Q3LI73 84 aa3.99□□□□□ -1.77
TMEM39A-211ENST00000491685 MT1GP13640 62 aa3.98□□□□□ -1.77
TMEM39A-211ENST00000491685 MT4P47944 62 aa3.97□□□□□ -1.77
TMEM39A-211ENST00000491685 LCE4AQ5TA78 99 aa3.97□□□□□ -1.77
TMEM39A-211ENST00000491685 KRTAP12-3P60328 96 aa3.95□□□□□ -1.78
TMEM39A-211ENST00000491685 KRTAP5-7Q6L8G8 165 aa3.94□□□□□ -1.78
TMEM39A-211ENST00000491685 MT1MQ8N339 61 aa3.92□□□□□ -1.78
TMEM39A-211ENST00000491685 MT1LQ93083 61 aa3.9□□□□□ -1.79
TMEM39A-211ENST00000491685 KRTAP4-3Q9BYR4 195 aa3.89□□□□□ -1.79
TMEM39A-211ENST00000491685 PRAC1Q96KF2 57 aa3.86□□□□□ -1.79
TMEM39A-211ENST00000491685 KRTAP5-4Q6L8H1 288 aa3.84□□□□□ -1.79
TMEM39A-211ENST00000491685 KRTAP5-3Q6L8H2 238 aa3.82□□□□□ -1.8
TMEM39A-211ENST00000491685 KRTAP15-1Q3LI76 137 aa3.81□□□□□ -1.8
TMEM39A-211ENST00000491685 KRTAP4-12Q9BQ66 201 aa3.81□□□□□ -1.8
TMEM39A-211ENST00000491685 KRTAP9-9Q9BYP9 154 aa3.78□□□□□ -1.8
TMEM39A-211ENST00000491685 KRTAP9-4Q9BYQ2 154 aa3.78□□□□□ -1.8
TMEM39A-211ENST00000491685 SPRR5A0A1B0GTR4 108 aa3.75□□□□□ -1.81
TMEM39A-211ENST00000491685 KRTAP4-7Q9BYR0 210 aa3.75□□□□□ -1.81
TMEM39A-211ENST00000491685 LCE3CQ5T5A8 94 aa3.67□□□□□ -1.82
TMEM39A-211ENST00000491685 KRTAP20-2Q3LI61 65 aa3.64□□□□□ -1.83
TMEM39A-211ENST00000491685 KRTAP5-5Q701N2 237 aaPredicted RBP3.62□□□□□ -1.83
TMEM39A-211ENST00000491685 KRTAP12-4P60329 112 aa3.58□□□□□ -1.84
TMEM39A-211ENST00000491685 KRTAP4-2Q9BYR5 136 aa3.51□□□□□ -1.85
TMEM39A-211ENST00000491685 SYNE1Q8NF91 8797 aaKnown RBP3.5□□□□□ -1.85
TMEM39A-211ENST00000491685 AHNAKQ09666 5890 aaKnown RBP3.48□□□□□ -1.85
TMEM39A-211ENST00000491685 MUC5ACP98088 5654 aa3.44□□□□□ -1.86
TMEM39A-211ENST00000491685 KRTAP4-11Q9BYQ6 195 aa3.42□□□□□ -1.86
TMEM39A-211ENST00000491685 LUZP6Q538Z0 58 aa3.41□□□□□ -1.86
TMEM39A-211ENST00000491685 MUC5BQ9HC84 5762 aaPredicted RBP3.4□□□□□ -1.86
TMEM39A-211ENST00000491685 KRTAP9-6A8MVA2 160 aa3.33□□□□□ -1.88
TMEM39A-211ENST00000491685 KRTAP5-8O75690 187 aa3.33□□□□□ -1.88
TMEM39A-211ENST00000491685 KRTAP5-2Q701N4 177 aa3.33□□□□□ -1.88
TMEM39A-211ENST00000491685 KRTAP6-1Q3LI64 71 aa3.32□□□□□ -1.88
TMEM39A-211ENST00000491685 MT1AP04731 61 aa3.31□□□□□ -1.88
TMEM39A-211ENST00000491685 H3BS24 57 aa3.22□□□□□ -1.89
TMEM39A-211ENST00000491685 KRTAP6-2Q3LI66 62 aa3.19□□□□□ -1.9
TMEM39A-211ENST00000491685 OBSCNQ5VST9 7968 aa3.17□□□□□ -1.9
TMEM39A-211ENST00000491685 MT3P25713 68 aa3.08□□□□□ -1.92
TMEM39A-211ENST00000491685 NDUFAF8A1L188 74 aa3.05□□□□□ -1.92
TMEM39A-211ENST00000491685 KRTAP5-1Q6L8H4 278 aa3.02□□□□□ -1.93
TMEM39A-211ENST00000491685 LCE1EQ5T753 118 aa2.84□□□□□ -1.95
TMEM39A-211ENST00000491685 A0A0A0MQY5 61 aa2.83□□□□□ -1.96
TMEM39A-211ENST00000491685 LCE3DQ9BYE3 92 aa2.73□□□□□ -1.97
TMEM39A-211ENST00000491685 INE1O15225 51 aa2.72□□□□□ -1.97
TMEM39A-211ENST00000491685 LCE1BQ5T7P3 118 aa2.67□□□□□ -1.98
TMEM39A-211ENST00000491685 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.99
TMEM39A-211ENST00000491685 LCE1CQ5T751 118 aa2.62□□□□□ -1.99
TMEM39A-211ENST00000491685 KRTAP5-11Q6L8G4 156 aa2.43□□□□□ -2.02
TMEM39A-211ENST00000491685 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.43□□□□□ -2.02
TMEM39A-211ENST00000491685 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
TMEM39A-211ENST00000491685 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
TMEM39A-211ENST00000491685 KRTAP21-2Q3LI59 83 aa2.19□□□□□ -2.06
TMEM39A-211ENST00000491685 PRM1P04553 51 aa2.15□□□□□ -2.07
TMEM39A-211ENST00000491685 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
TMEM39A-211ENST00000491685 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
TMEM39A-211ENST00000491685 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
TMEM39A-211ENST00000491685 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms