RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 KTN1-AS1Q86SY8 53 aa3.21□□□□□ -1.9
APOBEC3F-204ENST00000491387 SPINT4Q6UDR6 99 aa3.2□□□□□ -1.9
APOBEC3F-204ENST00000491387 KRTAP4-9Q9BYQ8 210 aa3.2□□□□□ -1.9
APOBEC3F-204ENST00000491387 KRTAP19-7Q3SYF9 63 aa3.19□□□□□ -1.9
APOBEC3F-204ENST00000491387 KRTAP19-3Q7Z4W3 81 aa3.18□□□□□ -1.9
APOBEC3F-204ENST00000491387 MT1EP04732 61 aa3.17□□□□□ -1.9
APOBEC3F-204ENST00000491387 H3BS24 57 aa3.14□□□□□ -1.91
APOBEC3F-204ENST00000491387 ROMO1P60602 79 aa3.14□□□□□ -1.91
APOBEC3F-204ENST00000491387 HMCN1Q96RW7 5635 aa3.13□□□□□ -1.91
APOBEC3F-204ENST00000491387 LCE1DQ5T752 114 aa3.13□□□□□ -1.91
APOBEC3F-204ENST00000491387 LCE4AQ5TA78 99 aa3.11□□□□□ -1.91
APOBEC3F-204ENST00000491387 CAMK2N1Q7Z7J9 78 aa3.11□□□□□ -1.91
APOBEC3F-204ENST00000491387 MT1GP13640 62 aa3.1□□□□□ -1.91
APOBEC3F-204ENST00000491387 PRAC1Q96KF2 57 aa3.1□□□□□ -1.91
APOBEC3F-204ENST00000491387 AHNAK2Q8IVF2 5795 aa3.09□□□□□ -1.91
APOBEC3F-204ENST00000491387 KRTAP19-5Q3LI72 72 aa3.05□□□□□ -1.92
APOBEC3F-204ENST00000491387 PP632Q6XCG6 107 aa3.05□□□□□ -1.92
APOBEC3F-204ENST00000491387 KRTAP5-10Q6L8G5 202 aa3.04□□□□□ -1.92
APOBEC3F-204ENST00000491387 KRTAP5-4Q6L8H1 288 aa3.04□□□□□ -1.92
APOBEC3F-204ENST00000491387 MT4P47944 62 aa3.03□□□□□ -1.92
APOBEC3F-204ENST00000491387 KRTAP25-1Q3LHN0 102 aa3.03□□□□□ -1.92
APOBEC3F-204ENST00000491387 C10orf95Q9H7T3 257 aa3.03□□□□□ -1.92
APOBEC3F-204ENST00000491387 MT1MQ8N339 61 aa3.02□□□□□ -1.93
APOBEC3F-204ENST00000491387 MT1LQ93083 61 aa3□□□□□ -1.93
APOBEC3F-204ENST00000491387 KRTAP4-3Q9BYR4 195 aa2.99□□□□□ -1.93
APOBEC3F-204ENST00000491387 LCE3AQ5TA76 89 aa2.97□□□□□ -1.93
APOBEC3F-204ENST00000491387 KRTAP4-6Q9BYQ5 205 aa2.97□□□□□ -1.93
APOBEC3F-204ENST00000491387 LOC100996750A0A140TA64 210 aa2.96□□□□□ -1.94
APOBEC3F-204ENST00000491387 KRTAP5-7Q6L8G8 165 aa2.96□□□□□ -1.94
APOBEC3F-204ENST00000491387 TNP1P09430 55 aa2.95□□□□□ -1.94
APOBEC3F-204ENST00000491387 KRTAP5-3Q6L8H2 238 aa2.92□□□□□ -1.94
APOBEC3F-204ENST00000491387 KRTAP4-7Q9BYR0 210 aa2.9□□□□□ -1.95
APOBEC3F-204ENST00000491387 KRTAP23-1A1A580 65 aa2.88□□□□□ -1.95
APOBEC3F-204ENST00000491387 SPRR5A0A1B0GTR4 108 aa2.84□□□□□ -1.95
APOBEC3F-204ENST00000491387 KRTAP20-2Q3LI61 65 aa2.84□□□□□ -1.95
APOBEC3F-204ENST00000491387 KRTAP19-4Q3LI73 84 aa2.82□□□□□ -1.96
APOBEC3F-204ENST00000491387 KRTAP5-5Q701N2 237 aaPredicted RBP2.82□□□□□ -1.96
APOBEC3F-204ENST00000491387 SYNE1Q8NF91 8797 aaKnown RBP2.79□□□□□ -1.96
APOBEC3F-204ENST00000491387 KRTAP12-3P60328 96 aa2.78□□□□□ -1.96
APOBEC3F-204ENST00000491387 KRTAP12-4P60329 112 aa2.77□□□□□ -1.97
APOBEC3F-204ENST00000491387 KRTAP4-12Q9BQ66 201 aa2.71□□□□□ -1.98
APOBEC3F-204ENST00000491387 KRTAP15-1Q3LI76 137 aa2.68□□□□□ -1.98
APOBEC3F-204ENST00000491387 KRTAP4-11Q9BYQ6 195 aa2.66□□□□□ -1.98
APOBEC3F-204ENST00000491387 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
APOBEC3F-204ENST00000491387 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
APOBEC3F-204ENST00000491387 MUC5BQ9HC84 5762 aaPredicted RBP2.59□□□□□ -1.99
APOBEC3F-204ENST00000491387 MUC5ACP98088 5654 aa2.59□□□□□ -1.99
APOBEC3F-204ENST00000491387 KRTAP9-9Q9BYP9 154 aa2.58□□□□□ -2
APOBEC3F-204ENST00000491387 KRTAP9-4Q9BYQ2 154 aa2.58□□□□□ -2
APOBEC3F-204ENST00000491387 KRTAP5-8O75690 187 aa2.57□□□□□ -2
APOBEC3F-204ENST00000491387 LCE3CQ5T5A8 94 aa2.56□□□□□ -2
APOBEC3F-204ENST00000491387 MT1AP04731 61 aa2.55□□□□□ -2
APOBEC3F-204ENST00000491387 KRTAP6-1Q3LI64 71 aa2.54□□□□□ -2
APOBEC3F-204ENST00000491387 KRTAP9-6A8MVA2 160 aa2.53□□□□□ -2
APOBEC3F-204ENST00000491387 LUZP6Q538Z0 58 aa2.53□□□□□ -2
APOBEC3F-204ENST00000491387 OBSCNQ5VST9 7968 aa2.51□□□□□ -2.01
APOBEC3F-204ENST00000491387 NDUFAF8A1L188 74 aa2.5□□□□□ -2.01
APOBEC3F-204ENST00000491387 KRTAP6-2Q3LI66 62 aa2.45□□□□□ -2.02
APOBEC3F-204ENST00000491387 KRTAP5-1Q6L8H4 278 aa2.39□□□□□ -2.03
APOBEC3F-204ENST00000491387 MT3P25713 68 aa2.34□□□□□ -2.03
APOBEC3F-204ENST00000491387 KRTAP4-2Q9BYR5 136 aa2.3□□□□□ -2.04
APOBEC3F-204ENST00000491387 LCE1EQ5T753 118 aa2.23□□□□□ -2.05
APOBEC3F-204ENST00000491387 A0A0A0MQY5 61 aa2.22□□□□□ -2.05
APOBEC3F-204ENST00000491387 INE1O15225 51 aa2.07□□□□□ -2.08
APOBEC3F-204ENST00000491387 LCE1CQ5T751 118 aa2.07□□□□□ -2.08
APOBEC3F-204ENST00000491387 LCE1BQ5T7P3 118 aa2.07□□□□□ -2.08
APOBEC3F-204ENST00000491387 KRTAP5-11Q6L8G4 156 aa1.91□□□□□ -2.1
APOBEC3F-204ENST00000491387 LCE1FQ5T754 118 aa1.89□□□□□ -2.11
APOBEC3F-204ENST00000491387 LCE3DQ9BYE3 92 aa1.89□□□□□ -2.11
APOBEC3F-204ENST00000491387 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.87□□□□□ -2.11
APOBEC3F-204ENST00000491387 LCE3EQ5T5B0 92 aa1.85□□□□□ -2.11
APOBEC3F-204ENST00000491387 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
APOBEC3F-204ENST00000491387 KRTAP21-2Q3LI59 83 aa1.69□□□□□ -2.14
APOBEC3F-204ENST00000491387 PRM1P04553 51 aa1.64□□□□□ -2.15
APOBEC3F-204ENST00000491387 KRTAP4-4Q9BYR3 166 aa1.59□□□□□ -2.15
APOBEC3F-204ENST00000491387 MUC19Q7Z5P9 8384 aa1.57□□□□□ -2.16
APOBEC3F-204ENST00000491387 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
APOBEC3F-204ENST00000491387 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 51.8 ms