RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 KRTAP2-3P0C7H8 128 aa3.87□□□□□ -1.79
CACNA1C-227ENST00000491104 KRTAP19-3Q7Z4W3 81 aa3.87□□□□□ -1.79
CACNA1C-227ENST00000491104 KRTAP2-4Q9BYR9 128 aa3.87□□□□□ -1.79
CACNA1C-227ENST00000491104 SPRR2DP22532 72 aa3.86□□□□□ -1.79
CACNA1C-227ENST00000491104 MT1LQ93083 61 aa3.86□□□□□ -1.79
CACNA1C-227ENST00000491104 PMAIP1Q13794 54 aa3.84□□□□□ -1.79
CACNA1C-227ENST00000491104 LCE5AQ5TCM9 118 aa3.83□□□□□ -1.8
CACNA1C-227ENST00000491104 PP632Q6XCG6 107 aa3.81□□□□□ -1.8
CACNA1C-227ENST00000491104 PRO0628Q9UI54 55 aa3.81□□□□□ -1.8
CACNA1C-227ENST00000491104 MT1GP13640 62 aa3.79□□□□□ -1.8
CACNA1C-227ENST00000491104 MT1MQ8N339 61 aa3.77□□□□□ -1.81
CACNA1C-227ENST00000491104 KRTAP15-1Q3LI76 137 aa3.73□□□□□ -1.81
CACNA1C-227ENST00000491104 KRTAP2-2Q9BYT5 123 aa3.73□□□□□ -1.81
CACNA1C-227ENST00000491104 KRTAP2-1Q9BYU5 128 aa3.73□□□□□ -1.81
CACNA1C-227ENST00000491104 LCE3BQ5TA77 95 aa3.72□□□□□ -1.81
CACNA1C-227ENST00000491104 KRTAP4-7Q9BYR0 210 aa3.72□□□□□ -1.81
CACNA1C-227ENST00000491104 KRTAP4-3Q9BYR4 195 aa3.72□□□□□ -1.81
CACNA1C-227ENST00000491104 PRAC1Q96KF2 57 aa3.7□□□□□ -1.82
CACNA1C-227ENST00000491104 SVIPQ8NHG7 77 aa3.63□□□□□ -1.83
CACNA1C-227ENST00000491104 LCE3CQ5T5A8 94 aa3.61□□□□□ -1.83
CACNA1C-227ENST00000491104 DSTQ03001 7570 aaKnown RBP3.61□□□□□ -1.83
CACNA1C-227ENST00000491104 GPR98Q8WXG9 6306 aa3.6□□□□□ -1.83
CACNA1C-227ENST00000491104 KTN1-AS1Q86SY8 53 aa3.59□□□□□ -1.83
CACNA1C-227ENST00000491104 KRTAP19-4Q3LI73 84 aa3.58□□□□□ -1.84
CACNA1C-227ENST00000491104 LOC100996750A0A140TA64 210 aa3.51□□□□□ -1.85
CACNA1C-227ENST00000491104 KRTAP4-9Q9BYQ8 210 aa3.46□□□□□ -1.86
CACNA1C-227ENST00000491104 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
CACNA1C-227ENST00000491104 HMCN1Q96RW7 5635 aa3.42□□□□□ -1.86
CACNA1C-227ENST00000491104 KRTAP5-5Q701N2 237 aaPredicted RBP3.41□□□□□ -1.86
CACNA1C-227ENST00000491104 LCE4AQ5TA78 99 aa3.4□□□□□ -1.87
CACNA1C-227ENST00000491104 KRTAP5-4Q6L8H1 288 aa3.39□□□□□ -1.87
CACNA1C-227ENST00000491104 AHNAK2Q8IVF2 5795 aa3.39□□□□□ -1.87
CACNA1C-227ENST00000491104 MT4P47944 62 aa3.37□□□□□ -1.87
CACNA1C-227ENST00000491104 LCE1DQ5T752 114 aa3.35□□□□□ -1.87
CACNA1C-227ENST00000491104 KRTAP4-6Q9BYQ5 205 aa3.33□□□□□ -1.88
CACNA1C-227ENST00000491104 SYNE1Q8NF91 8797 aaKnown RBP3.29□□□□□ -1.88
CACNA1C-227ENST00000491104 SPRR5A0A1B0GTR4 108 aa3.28□□□□□ -1.88
CACNA1C-227ENST00000491104 MT1AP04731 61 aa3.28□□□□□ -1.88
CACNA1C-227ENST00000491104 KRTAP6-1Q3LI64 71 aa3.26□□□□□ -1.89
CACNA1C-227ENST00000491104 KRTAP12-4P60329 112 aa3.21□□□□□ -1.9
CACNA1C-227ENST00000491104 KRTAP5-10Q6L8G5 202 aa3.21□□□□□ -1.9
CACNA1C-227ENST00000491104 KRTAP20-2Q3LI61 65 aa3.2□□□□□ -1.9
CACNA1C-227ENST00000491104 KRTAP9-4Q9BYQ2 154 aa3.13□□□□□ -1.91
CACNA1C-227ENST00000491104 KRTAP5-7Q6L8G8 165 aa3.09□□□□□ -1.91
CACNA1C-227ENST00000491104 KRTAP5-3Q6L8H2 238 aa3.09□□□□□ -1.91
CACNA1C-227ENST00000491104 KRTAP6-2Q3LI66 62 aa3.05□□□□□ -1.92
CACNA1C-227ENST00000491104 KRTAP5-2Q701N4 177 aa3.03□□□□□ -1.92
CACNA1C-227ENST00000491104 LUZP6Q538Z0 58 aa2.99□□□□□ -1.93
CACNA1C-227ENST00000491104 MT3P25713 68 aa2.96□□□□□ -1.94
CACNA1C-227ENST00000491104 KRTAP4-11Q9BYQ6 195 aa2.84□□□□□ -1.95
CACNA1C-227ENST00000491104 MUC5BQ9HC84 5762 aaPredicted RBP2.83□□□□□ -1.96
CACNA1C-227ENST00000491104 AHNAKQ09666 5890 aaKnown RBP2.81□□□□□ -1.96
CACNA1C-227ENST00000491104 KRTAP9-9Q9BYP9 154 aa2.78□□□□□ -1.96
CACNA1C-227ENST00000491104 MUC5ACP98088 5654 aa2.78□□□□□ -1.96
CACNA1C-227ENST00000491104 NDUFAF8A1L188 74 aa2.75□□□□□ -1.97
CACNA1C-227ENST00000491104 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
CACNA1C-227ENST00000491104 KRTAP4-12Q9BQ66 201 aa2.75□□□□□ -1.97
CACNA1C-227ENST00000491104 OBSCNQ5VST9 7968 aa2.74□□□□□ -1.97
CACNA1C-227ENST00000491104 KRTAP5-1Q6L8H4 278 aa2.67□□□□□ -1.98
CACNA1C-227ENST00000491104 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
CACNA1C-227ENST00000491104 LCE1EQ5T753 118 aa2.61□□□□□ -1.99
CACNA1C-227ENST00000491104 KRTAP4-2Q9BYR5 136 aa2.59□□□□□ -1.99
CACNA1C-227ENST00000491104 LCE3EQ5T5B0 92 aa2.55□□□□□ -2
CACNA1C-227ENST00000491104 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
CACNA1C-227ENST00000491104 H3BS24 57 aa2.51□□□□□ -2.01
CACNA1C-227ENST00000491104 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
CACNA1C-227ENST00000491104 A0A0A0MQY5 61 aa2.42□□□□□ -2.02
CACNA1C-227ENST00000491104 INE1O15225 51 aa2.25□□□□□ -2.05
CACNA1C-227ENST00000491104 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.25□□□□□ -2.05
CACNA1C-227ENST00000491104 KRTAP5-11Q6L8G4 156 aa2.2□□□□□ -2.06
CACNA1C-227ENST00000491104 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
CACNA1C-227ENST00000491104 PRM1P04553 51 aa2.11□□□□□ -2.07
CACNA1C-227ENST00000491104 LCE1FQ5T754 118 aa2.03□□□□□ -2.08
CACNA1C-227ENST00000491104 KRTAP4-4Q9BYR3 166 aa1.96□□□□□ -2.1
CACNA1C-227ENST00000491104 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
CACNA1C-227ENST00000491104 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
CACNA1C-227ENST00000491104 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
CACNA1C-227ENST00000491104 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 65.6 ms