RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 MUC12Q9UKN1 5478 aa3.27□□□□□ -1.89
CLDN1-202ENST00000490800 KRTAP12-1P59990 96 aa3.27□□□□□ -1.89
CLDN1-202ENST00000490800 KRTAP12-2P59991 146 aa3.26□□□□□ -1.89
CLDN1-202ENST00000490800 NEBP20929 6669 aa3.25□□□□□ -1.89
CLDN1-202ENST00000490800 SPINT4Q6UDR6 99 aa3.24□□□□□ -1.89
CLDN1-202ENST00000490800 PRO0628Q9UI54 55 aa3.24□□□□□ -1.89
CLDN1-202ENST00000490800 K7ERS5 55 aa3.21□□□□□ -1.9
CLDN1-202ENST00000490800 KRTAP5-9P26371 169 aa3.19□□□□□ -1.9
CLDN1-202ENST00000490800 PLAC4Q8WY50 150 aa3.19□□□□□ -1.9
CLDN1-202ENST00000490800 KMT2DO14686 5537 aa3.18□□□□□ -1.9
CLDN1-202ENST00000490800 KRTAP20-1Q3LI63 56 aa3.17□□□□□ -1.9
CLDN1-202ENST00000490800 MDN1Q9NU22 5596 aa3.16□□□□□ -1.9
CLDN1-202ENST00000490800 PMAIP1Q13794 54 aa3.15□□□□□ -1.91
CLDN1-202ENST00000490800 CAMK2N1Q7Z7J9 78 aa3.15□□□□□ -1.91
CLDN1-202ENST00000490800 MT1XP80297 61 aa3.11□□□□□ -1.91
CLDN1-202ENST00000490800 C10orf95Q9H7T3 257 aa3.11□□□□□ -1.91
CLDN1-202ENST00000490800 ROMO1P60602 79 aa3.1□□□□□ -1.91
CLDN1-202ENST00000490800 KRTAP5-1Q6L8H4 278 aa3.1□□□□□ -1.91
CLDN1-202ENST00000490800 SPRR2FQ96RM1 72 aa3.09□□□□□ -1.91
CLDN1-202ENST00000490800 PRO2289Q9P1D8 64 aa3.09□□□□□ -1.91
CLDN1-202ENST00000490800 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
CLDN1-202ENST00000490800 KRTAP2-3P0C7H8 128 aa3.07□□□□□ -1.92
CLDN1-202ENST00000490800 KRTAP2-4Q9BYR9 128 aa3.07□□□□□ -1.92
CLDN1-202ENST00000490800 SPRR2EP22531 72 aa3.05□□□□□ -1.92
CLDN1-202ENST00000490800 SPRR2BP35325 72 aa3.05□□□□□ -1.92
CLDN1-202ENST00000490800 SPRR2AP35326 72 aa3.05□□□□□ -1.92
CLDN1-202ENST00000490800 KRTAP8-1Q8IUC2 63 aa3.05□□□□□ -1.92
CLDN1-202ENST00000490800 KRTAP5-4Q6L8H1 288 aa3.01□□□□□ -1.93
CLDN1-202ENST00000490800 KTN1-AS1Q86SY8 53 aa3.01□□□□□ -1.93
CLDN1-202ENST00000490800 KRTAP9-6A8MVA2 160 aa3□□□□□ -1.93
CLDN1-202ENST00000490800 TNP1P09430 55 aa3□□□□□ -1.93
CLDN1-202ENST00000490800 KRTAP25-1Q3LHN0 102 aa3□□□□□ -1.93
CLDN1-202ENST00000490800 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
CLDN1-202ENST00000490800 KRTAP2-1Q9BYU5 128 aa2.98□□□□□ -1.93
CLDN1-202ENST00000490800 SPRR2DP22532 72 aa2.96□□□□□ -1.94
CLDN1-202ENST00000490800 LCE3AQ5TA76 89 aa2.9□□□□□ -1.95
CLDN1-202ENST00000490800 PP632Q6XCG6 107 aa2.88□□□□□ -1.95
CLDN1-202ENST00000490800 KRTAP19-5Q3LI72 72 aa2.8□□□□□ -1.96
CLDN1-202ENST00000490800 KRTAP12-3P60328 96 aa2.78□□□□□ -1.96
CLDN1-202ENST00000490800 KRTAP19-7Q3SYF9 63 aa2.78□□□□□ -1.96
CLDN1-202ENST00000490800 DSTQ03001 7570 aaKnown RBP2.76□□□□□ -1.97
CLDN1-202ENST00000490800 MT1EP04732 61 aa2.75□□□□□ -1.97
CLDN1-202ENST00000490800 KRTAP19-3Q7Z4W3 81 aa2.74□□□□□ -1.97
CLDN1-202ENST00000490800 GPR98Q8WXG9 6306 aa2.68□□□□□ -1.98
CLDN1-202ENST00000490800 MT1GP13640 62 aa2.68□□□□□ -1.98
CLDN1-202ENST00000490800 MT1LQ93083 61 aa2.67□□□□□ -1.98
CLDN1-202ENST00000490800 OBSCNQ5VST9 7968 aa2.66□□□□□ -1.98
CLDN1-202ENST00000490800 KRTAP4-3Q9BYR4 195 aa2.64□□□□□ -1.99
CLDN1-202ENST00000490800 MT1MQ8N339 61 aa2.63□□□□□ -1.99
CLDN1-202ENST00000490800 MT4P47944 62 aa2.61□□□□□ -1.99
CLDN1-202ENST00000490800 LCE3DQ9BYE3 92 aa2.61□□□□□ -1.99
CLDN1-202ENST00000490800 HMCN1Q96RW7 5635 aa2.59□□□□□ -1.99
CLDN1-202ENST00000490800 SPRR5A0A1B0GTR4 108 aa2.55□□□□□ -2
CLDN1-202ENST00000490800 LUZP6Q538Z0 58 aa2.51□□□□□ -2.01
CLDN1-202ENST00000490800 AHNAK2Q8IVF2 5795 aa2.5□□□□□ -2.01
CLDN1-202ENST00000490800 KRTAP5-2Q701N4 177 aa2.5□□□□□ -2.01
CLDN1-202ENST00000490800 KRTAP5-10Q6L8G5 202 aa2.47□□□□□ -2.01
CLDN1-202ENST00000490800 KRTAP20-2Q3LI61 65 aa2.41□□□□□ -2.02
CLDN1-202ENST00000490800 KRTAP5-5Q701N2 237 aaPredicted RBP2.41□□□□□ -2.02
CLDN1-202ENST00000490800 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
CLDN1-202ENST00000490800 SYNE1Q8NF91 8797 aaKnown RBP2.37□□□□□ -2.03
CLDN1-202ENST00000490800 KRTAP12-4P60329 112 aa2.37□□□□□ -2.03
CLDN1-202ENST00000490800 MT1AP04731 61 aa2.27□□□□□ -2.05
CLDN1-202ENST00000490800 KRTAP6-1Q3LI64 71 aa2.24□□□□□ -2.05
CLDN1-202ENST00000490800 LCE1CQ5T751 118 aa2.2□□□□□ -2.06
CLDN1-202ENST00000490800 LCE1BQ5T7P3 118 aa2.2□□□□□ -2.06
CLDN1-202ENST00000490800 KRTAP5-8O75690 187 aa2.15□□□□□ -2.07
CLDN1-202ENST00000490800 KRTAP6-2Q3LI66 62 aa2.14□□□□□ -2.07
CLDN1-202ENST00000490800 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
CLDN1-202ENST00000490800 AHNAKQ09666 5890 aaKnown RBP2.08□□□□□ -2.08
CLDN1-202ENST00000490800 MUC5ACP98088 5654 aa2.06□□□□□ -2.08
CLDN1-202ENST00000490800 INE1O15225 51 aa1.91□□□□□ -2.1
CLDN1-202ENST00000490800 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
CLDN1-202ENST00000490800 PRM1P04553 51 aa1.61□□□□□ -2.15
CLDN1-202ENST00000490800 KRTAP21-2Q3LI59 83 aa1.55□□□□□ -2.16
CLDN1-202ENST00000490800 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
CLDN1-202ENST00000490800 KRTAP21-1Q3LI58 79 aa1.09□□□□□ -2.23
CLDN1-202ENST00000490800 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 36.7 ms