RNA–Protein interactions for RNA: ENST00000490111.1

RTN1-207, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-207ENST00000490111 NREPQ16612 68 aa1.93□□□□□ -2.1
RTN1-207ENST00000490111 KRTAP4-9Q9BYQ8 210 aa1.91□□□□□ -2.1
RTN1-207ENST00000490111 A0A1B0GU69 56 aa1.89□□□□□ -2.11
RTN1-207ENST00000490111 LCE3EQ5T5B0 92 aa1.89□□□□□ -2.11
RTN1-207ENST00000490111 LCE1DQ5T752 114 aa1.89□□□□□ -2.11
RTN1-207ENST00000490111 KRTAP5-10Q6L8G5 202 aa1.88□□□□□ -2.11
RTN1-207ENST00000490111 KRTAP10-5P60370 271 aa1.87□□□□□ -2.11
RTN1-207ENST00000490111 LCE1EQ5T753 118 aa1.87□□□□□ -2.11
RTN1-207ENST00000490111 WFDC13Q8IUB5 93 aa1.87□□□□□ -2.11
RTN1-207ENST00000490111 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
RTN1-207ENST00000490111 AHNAK2Q8IVF2 5795 aa1.85□□□□□ -2.11
RTN1-207ENST00000490111 KRTAP12-1P59990 96 aa1.85□□□□□ -2.11
RTN1-207ENST00000490111 DSTQ03001 7570 aaKnown RBP1.84□□□□□ -2.11
RTN1-207ENST00000490111 HMCN1Q96RW7 5635 aa1.84□□□□□ -2.11
RTN1-207ENST00000490111 MT1BP07438 61 aa1.84□□□□□ -2.11
RTN1-207ENST00000490111 H0YGX0 51 aa1.81□□□□□ -2.12
RTN1-207ENST00000490111 KRTAP10-7P60409 375 aaPredicted RBP1.81□□□□□ -2.12
RTN1-207ENST00000490111 KRTAP8-1Q8IUC2 63 aa1.81□□□□□ -2.12
RTN1-207ENST00000490111 KRTAP4-8A0A0G2JLE6 195 aa1.8□□□□□ -2.12
RTN1-207ENST00000490111 H1FX-AS1Q4G0G2 97 aa1.8□□□□□ -2.12
RTN1-207ENST00000490111 KRTAP4-11Q9BYQ6 195 aa1.8□□□□□ -2.12
RTN1-207ENST00000490111 UBL5Q9BZL1 73 aa1.8□□□□□ -2.12
RTN1-207ENST00000490111 MMP24-AS1A0A0U1RRL7 71 aa1.76□□□□□ -2.13
RTN1-207ENST00000490111 KRTAP19-8Q3LI54 63 aa1.76□□□□□ -2.13
RTN1-207ENST00000490111 K7EQZ3 153 aa1.74□□□□□ -2.13
RTN1-207ENST00000490111 MT4P47944 62 aa1.74□□□□□ -2.13
RTN1-207ENST00000490111 KRTAP5-3Q6L8H2 238 aa1.74□□□□□ -2.13
RTN1-207ENST00000490111 MRPL34Q9BQ48 92 aaKnown RBP1.74□□□□□ -2.13
RTN1-207ENST00000490111 SPRR2GQ9BYE4 73 aa1.74□□□□□ -2.13
RTN1-207ENST00000490111 LCE3DQ9BYE3 92 aa1.71□□□□□ -2.14
RTN1-207ENST00000490111 S4R3F8 94 aa1.71□□□□□ -2.14
RTN1-207ENST00000490111 KRTAP4-7Q9BYR0 210 aa1.69□□□□□ -2.14
RTN1-207ENST00000490111 MT1XP80297 61 aa1.68□□□□□ -2.14
RTN1-207ENST00000490111 CRIPTQ9P021 101 aa1.68□□□□□ -2.14
RTN1-207ENST00000490111 AHNAKQ09666 5890 aaKnown RBP1.66□□□□□ -2.14
RTN1-207ENST00000490111 KRTAP12-4P60329 112 aa1.66□□□□□ -2.14
RTN1-207ENST00000490111 TP53AIP1Q9HCN2 124 aa1.66□□□□□ -2.14
RTN1-207ENST00000490111 C10orf95Q9H7T3 257 aa1.64□□□□□ -2.15
RTN1-207ENST00000490111 MUC5ACP98088 5654 aa1.62□□□□□ -2.15
RTN1-207ENST00000490111 KRTAP4-2Q9BYR5 136 aa1.61□□□□□ -2.15
RTN1-207ENST00000490111 MUC5BQ9HC84 5762 aaPredicted RBP1.6□□□□□ -2.15
RTN1-207ENST00000490111 KRTAP5-4Q6L8H1 288 aa1.59□□□□□ -2.15
RTN1-207ENST00000490111 M0QZ58 72 aa1.57□□□□□ -2.16
RTN1-207ENST00000490111 H0YAA0 97 aa1.55□□□□□ -2.16
RTN1-207ENST00000490111 KRTAP20-2Q3LI61 65 aa1.53□□□□□ -2.16
RTN1-207ENST00000490111 KRTAP19-3Q7Z4W3 81 aa1.53□□□□□ -2.16
RTN1-207ENST00000490111 A0A0D9SG42 100 aa1.52□□□□□ -2.17
RTN1-207ENST00000490111 KRTAP12-3P60328 96 aa1.52□□□□□ -2.17
RTN1-207ENST00000490111 KRTAP19-7Q3SYF9 63 aa1.51□□□□□ -2.17
RTN1-207ENST00000490111 KRTAP5-8O75690 187 aa1.49□□□□□ -2.17
RTN1-207ENST00000490111 MT1EP04732 61 aa1.49□□□□□ -2.17
RTN1-207ENST00000490111 KRTAP4-3Q9BYR4 195 aa1.49□□□□□ -2.17
RTN1-207ENST00000490111 KRTAP9-6A8MVA2 160 aa1.48□□□□□ -2.17
RTN1-207ENST00000490111 MT1GP13640 62 aa1.46□□□□□ -2.18
RTN1-207ENST00000490111 KRTAP19-5Q3LI72 72 aa1.45□□□□□ -2.18
RTN1-207ENST00000490111 MT1MQ8N339 61 aa1.43□□□□□ -2.18
RTN1-207ENST00000490111 MT1LQ93083 61 aa1.41□□□□□ -2.18
RTN1-207ENST00000490111 KRTAP5-2Q701N4 177 aa1.39□□□□□ -2.19
RTN1-207ENST00000490111 SYNE1Q8NF91 8797 aaKnown RBP1.37□□□□□ -2.19
RTN1-207ENST00000490111 LCE3AQ5TA76 89 aa1.36□□□□□ -2.19
RTN1-207ENST00000490111 KRTAP5-5Q701N2 237 aaPredicted RBP1.34□□□□□ -2.19
RTN1-207ENST00000490111 OBSCNQ5VST9 7968 aa1.32□□□□□ -2.2
RTN1-207ENST00000490111 KRTAP5-1Q6L8H4 278 aa1.25□□□□□ -2.21
RTN1-207ENST00000490111 TNP1P09430 55 aa1.24□□□□□ -2.21
RTN1-207ENST00000490111 KRTAP5-11Q6L8G4 156 aa1.23□□□□□ -2.21
RTN1-207ENST00000490111 KRTAP6-1Q3LI64 71 aa1.22□□□□□ -2.21
RTN1-207ENST00000490111 KRTAP6-2Q3LI66 62 aa1.19□□□□□ -2.22
RTN1-207ENST00000490111 LCE1CQ5T751 118 aa1.19□□□□□ -2.22
RTN1-207ENST00000490111 LCE1BQ5T7P3 118 aa1.19□□□□□ -2.22
RTN1-207ENST00000490111 MT1AP04731 61 aa1.17□□□□□ -2.22
RTN1-207ENST00000490111 PHGR1C9JFL3 82 aa1.12□□□□□ -2.23
RTN1-207ENST00000490111 PRM1P04553 51 aa0.93□□□□□ -2.26
RTN1-207ENST00000490111 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.93□□□□□ -2.26
RTN1-207ENST00000490111 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
RTN1-207ENST00000490111 KRTAP4-4Q9BYR3 166 aa0.82□□□□□ -2.28
RTN1-207ENST00000490111 MUC19Q7Z5P9 8384 aa0.82□□□□□ -2.28
RTN1-207ENST00000490111 KRTAP21-2Q3LI59 83 aa0.79□□□□□ -2.28
RTN1-207ENST00000490111 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 58.7 ms