RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 KRTAP2-3P0C7H8 128 aa6.32□□□□□ -1.4
ERCC3-207ENST00000490062 KRTAP2-4Q9BYR9 128 aa6.32□□□□□ -1.4
ERCC3-207ENST00000490062 ROMO1P60602 79 aa6.3□□□□□ -1.4
ERCC3-207ENST00000490062 MT1GP13640 62 aa6.26□□□□□ -1.41
ERCC3-207ENST00000490062 KRTAP12-3P60328 96 aa6.25□□□□□ -1.41
ERCC3-207ENST00000490062 MT1LQ93083 61 aa6.24□□□□□ -1.41
ERCC3-207ENST00000490062 PP632Q6XCG6 107 aa6.18□□□□□ -1.42
ERCC3-207ENST00000490062 KRTAP2-2Q9BYT5 123 aa6.15□□□□□ -1.42
ERCC3-207ENST00000490062 KRTAP2-1Q9BYU5 128 aa6.15□□□□□ -1.42
ERCC3-207ENST00000490062 LCE3BQ5TA77 95 aa6.14□□□□□ -1.43
ERCC3-207ENST00000490062 BRK1Q8WUW1 75 aa6.14□□□□□ -1.43
ERCC3-207ENST00000490062 MT1MQ8N339 61 aa6.12□□□□□ -1.43
ERCC3-207ENST00000490062 KRTAP19-4Q3LI73 84 aa6.07□□□□□ -1.44
ERCC3-207ENST00000490062 DSTQ03001 7570 aaKnown RBP6.04□□□□□ -1.44
ERCC3-207ENST00000490062 KRTAP15-1Q3LI76 137 aa5.98□□□□□ -1.45
ERCC3-207ENST00000490062 KRTAP4-3Q9BYR4 195 aa5.9□□□□□ -1.46
ERCC3-207ENST00000490062 KRTAP4-7Q9BYR0 210 aa5.88□□□□□ -1.47
ERCC3-207ENST00000490062 PMAIP1Q13794 54 aa5.81□□□□□ -1.48
ERCC3-207ENST00000490062 LCE3CQ5T5A8 94 aa5.8□□□□□ -1.48
ERCC3-207ENST00000490062 PRO0628Q9UI54 55 aa5.74□□□□□ -1.49
ERCC3-207ENST00000490062 LCE4AQ5TA78 99 aa5.7□□□□□ -1.5
ERCC3-207ENST00000490062 KRTAP5-4Q6L8H1 288 aa5.7□□□□□ -1.5
ERCC3-207ENST00000490062 KRTAP5-5Q701N2 237 aaPredicted RBP5.64□□□□□ -1.51
ERCC3-207ENST00000490062 KRTAP4-9Q9BYQ8 210 aa5.56□□□□□ -1.52
ERCC3-207ENST00000490062 LOC100996750A0A140TA64 210 aa5.55□□□□□ -1.52
ERCC3-207ENST00000490062 LCE1DQ5T752 114 aa5.54□□□□□ -1.52
ERCC3-207ENST00000490062 HMCN1Q96RW7 5635 aa5.47□□□□□ -1.53
ERCC3-207ENST00000490062 PRAC1Q96KF2 57 aa5.47□□□□□ -1.53
ERCC3-207ENST00000490062 KRTAP9-6A8MVA2 160 aa5.46□□□□□ -1.54
ERCC3-207ENST00000490062 MT4P47944 62 aa5.46□□□□□ -1.54
ERCC3-207ENST00000490062 KRTAP4-6Q9BYQ5 205 aa5.4□□□□□ -1.54
ERCC3-207ENST00000490062 KTN1-AS1Q86SY8 53 aa5.39□□□□□ -1.55
ERCC3-207ENST00000490062 SPRR5A0A1B0GTR4 108 aa5.36□□□□□ -1.55
ERCC3-207ENST00000490062 MT1AP04731 61 aa5.34□□□□□ -1.55
ERCC3-207ENST00000490062 KRTAP12-4P60329 112 aa5.34□□□□□ -1.55
ERCC3-207ENST00000490062 SYNE1Q8NF91 8797 aaKnown RBP5.3□□□□□ -1.56
ERCC3-207ENST00000490062 KRTAP20-2Q3LI61 65 aa5.3□□□□□ -1.56
ERCC3-207ENST00000490062 KRTAP6-1Q3LI64 71 aa5.24□□□□□ -1.57
ERCC3-207ENST00000490062 KRTAP5-3Q6L8H2 238 aa5.16□□□□□ -1.58
ERCC3-207ENST00000490062 AHNAK2Q8IVF2 5795 aa5.14□□□□□ -1.59
ERCC3-207ENST00000490062 GPR98Q8WXG9 6306 aa5.13□□□□□ -1.59
ERCC3-207ENST00000490062 KRTAP9-4Q9BYQ2 154 aa5.11□□□□□ -1.59
ERCC3-207ENST00000490062 KRTAP5-2Q701N4 177 aa5.06□□□□□ -1.6
ERCC3-207ENST00000490062 SVIPQ8NHG7 77 aa5.01□□□□□ -1.61
ERCC3-207ENST00000490062 KRTAP5-10Q6L8G5 202 aa5□□□□□ -1.61
ERCC3-207ENST00000490062 KRTAP6-2Q3LI66 62 aa4.92□□□□□ -1.62
ERCC3-207ENST00000490062 MT3P25713 68 aa4.86□□□□□ -1.63
ERCC3-207ENST00000490062 KRTAP5-7Q6L8G8 165 aa4.78□□□□□ -1.64
ERCC3-207ENST00000490062 KRTAP4-11Q9BYQ6 195 aa4.75□□□□□ -1.65
ERCC3-207ENST00000490062 LUZP6Q538Z0 58 aa4.6□□□□□ -1.67
ERCC3-207ENST00000490062 KRTAP5-8O75690 187 aa4.59□□□□□ -1.67
ERCC3-207ENST00000490062 OBSCNQ5VST9 7968 aa4.59□□□□□ -1.68
ERCC3-207ENST00000490062 KRTAP5-1Q6L8H4 278 aa4.45□□□□□ -1.7
ERCC3-207ENST00000490062 LCE1EQ5T753 118 aa4.43□□□□□ -1.7
ERCC3-207ENST00000490062 MUC5ACP98088 5654 aa4.33□□□□□ -1.72
ERCC3-207ENST00000490062 KRTAP9-9Q9BYP9 154 aa4.25□□□□□ -1.73
ERCC3-207ENST00000490062 LCE3DQ9BYE3 92 aa4.24□□□□□ -1.73
ERCC3-207ENST00000490062 MUC5BQ9HC84 5762 aaPredicted RBP4.2□□□□□ -1.74
ERCC3-207ENST00000490062 AHNAKQ09666 5890 aaKnown RBP4.12□□□□□ -1.75
ERCC3-207ENST00000490062 KRTAP4-2Q9BYR5 136 aa4.12□□□□□ -1.75
ERCC3-207ENST00000490062 LCE1CQ5T751 118 aa4.1□□□□□ -1.75
ERCC3-207ENST00000490062 LCE1BQ5T7P3 118 aa4.1□□□□□ -1.75
ERCC3-207ENST00000490062 LCE3EQ5T5B0 92 aa4.06□□□□□ -1.76
ERCC3-207ENST00000490062 NDUFAF8A1L188 74 aa3.99□□□□□ -1.77
ERCC3-207ENST00000490062 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.81□□□□□ -1.8
ERCC3-207ENST00000490062 KRTAP5-11Q6L8G4 156 aa3.69□□□□□ -1.82
ERCC3-207ENST00000490062 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
ERCC3-207ENST00000490062 KRTAP21-2Q3LI59 83 aa3.48□□□□□ -1.85
ERCC3-207ENST00000490062 KRTAP4-12Q9BQ66 201 aa3.48□□□□□ -1.85
ERCC3-207ENST00000490062 A0A0A0MQY5 61 aa3.36□□□□□ -1.87
ERCC3-207ENST00000490062 INE1O15225 51 aa3.36□□□□□ -1.87
ERCC3-207ENST00000490062 PRM1P04553 51 aa3.21□□□□□ -1.9
ERCC3-207ENST00000490062 PHGR1C9JFL3 82 aa3.15□□□□□ -1.91
ERCC3-207ENST00000490062 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
ERCC3-207ENST00000490062 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
ERCC3-207ENST00000490062 H3BS24 57 aa2.32□□□□□ -2.04
ERCC3-207ENST00000490062 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
ERCC3-207ENST00000490062 MUC16Q8WXI7 14507 aa2.04□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 8.7 ms