RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 SNURFQ9Y675 71 aa6.27□□□□□ -1.41
TOP3B-217ENST00000489581 CAMK2N1Q7Z7J9 78 aa6.26□□□□□ -1.41
TOP3B-217ENST00000489581 KRTAP15-1Q3LI76 137 aa6.25□□□□□ -1.41
TOP3B-217ENST00000489581 MT4P47944 62 aa6.23□□□□□ -1.41
TOP3B-217ENST00000489581 KTN1-AS1Q86SY8 53 aa6.22□□□□□ -1.41
TOP3B-217ENST00000489581 KRTAP13-4Q3LI77 160 aa6.21□□□□□ -1.42
TOP3B-217ENST00000489581 CHKB-CPT1BH3BT56 60 aa6.17□□□□□ -1.42
TOP3B-217ENST00000489581 MT1GP13640 62 aa6.17□□□□□ -1.42
TOP3B-217ENST00000489581 HMCN1Q96RW7 5635 aa6.16□□□□□ -1.42
TOP3B-217ENST00000489581 KRTAP19-5Q3LI72 72 aa6.13□□□□□ -1.43
TOP3B-217ENST00000489581 PP632Q6XCG6 107 aa6.11□□□□□ -1.43
TOP3B-217ENST00000489581 A0A0D9SG42 100 aa6.1□□□□□ -1.43
TOP3B-217ENST00000489581 AHNAK2Q8IVF2 5795 aa6.09□□□□□ -1.43
TOP3B-217ENST00000489581 SPANXA2-OT1Q8N9U9 137 aa6.08□□□□□ -1.44
TOP3B-217ENST00000489581 KRTAP5-10Q6L8G5 202 aa6.07□□□□□ -1.44
TOP3B-217ENST00000489581 MT1MQ8N339 61 aa6.07□□□□□ -1.44
TOP3B-217ENST00000489581 PSPHP1O15172 72 aa6.01□□□□□ -1.45
TOP3B-217ENST00000489581 CDC42SE1Q9NRR8 79 aa6.01□□□□□ -1.45
TOP3B-217ENST00000489581 KRTAP5-4Q6L8H1 288 aa6□□□□□ -1.45
TOP3B-217ENST00000489581 MT1LQ93083 61 aa6□□□□□ -1.45
TOP3B-217ENST00000489581 KRTAP4-3Q9BYR4 195 aa5.99□□□□□ -1.45
TOP3B-217ENST00000489581 A6NED7 52 aa5.95□□□□□ -1.46
TOP3B-217ENST00000489581 PRR15LQ9BU68 103 aa5.95□□□□□ -1.46
TOP3B-217ENST00000489581 SPINT4Q6UDR6 99 aa5.92□□□□□ -1.46
TOP3B-217ENST00000489581 KRTAP5-7Q6L8G8 165 aa5.88□□□□□ -1.47
TOP3B-217ENST00000489581 SPATA8Q6RVD6 105 aa5.88□□□□□ -1.47
TOP3B-217ENST00000489581 LINC01558Q9Y6Z2 57 aa5.88□□□□□ -1.47
TOP3B-217ENST00000489581 KRTAP12-1P59990 96 aa5.82□□□□□ -1.48
TOP3B-217ENST00000489581 C10orf95Q9H7T3 257 aa5.82□□□□□ -1.48
TOP3B-217ENST00000489581 COA5Q86WW8 74 aa5.81□□□□□ -1.48
TOP3B-217ENST00000489581 LCE3AQ5TA76 89 aa5.79□□□□□ -1.48
TOP3B-217ENST00000489581 A0A1B0GU33 70 aa5.75□□□□□ -1.49
TOP3B-217ENST00000489581 KRTAP20-2Q3LI61 65 aa5.71□□□□□ -1.5
TOP3B-217ENST00000489581 A8MU10 97 aa5.69□□□□□ -1.5
TOP3B-217ENST00000489581 SPRR5A0A1B0GTR4 108 aa5.67□□□□□ -1.5
TOP3B-217ENST00000489581 TNP1P09430 55 aa5.65□□□□□ -1.5
TOP3B-217ENST00000489581 KRTAP5-5Q701N2 237 aaPredicted RBP5.58□□□□□ -1.52
TOP3B-217ENST00000489581 UQCR11O14957 56 aa5.56□□□□□ -1.52
TOP3B-217ENST00000489581 KRTAP12-4P60329 112 aa5.55□□□□□ -1.52
TOP3B-217ENST00000489581 A0A1B0GU69 56 aa5.54□□□□□ -1.52
TOP3B-217ENST00000489581 KRTAP12-3P60328 96 aa5.54□□□□□ -1.52
TOP3B-217ENST00000489581 MIR22HGQ0VDD5 57 aa5.52□□□□□ -1.53
TOP3B-217ENST00000489581 PRAC1Q96KF2 57 aa5.52□□□□□ -1.53
TOP3B-217ENST00000489581 SYNE1Q8NF91 8797 aaKnown RBP5.49□□□□□ -1.53
TOP3B-217ENST00000489581 ROMO1P60602 79 aa5.37□□□□□ -1.55
TOP3B-217ENST00000489581 KRTAP25-1Q3LHN0 102 aa5.35□□□□□ -1.55
TOP3B-217ENST00000489581 K7ERS5 55 aa5.3□□□□□ -1.56
TOP3B-217ENST00000489581 KRTAP5-2Q701N4 177 aa5.19□□□□□ -1.58
TOP3B-217ENST00000489581 KRTAP5-8O75690 187 aa5.15□□□□□ -1.59
TOP3B-217ENST00000489581 KRTAP6-1Q3LI64 71 aa5.1□□□□□ -1.59
TOP3B-217ENST00000489581 MT1AP04731 61 aa5.08□□□□□ -1.6
TOP3B-217ENST00000489581 MUC5ACP98088 5654 aa5.07□□□□□ -1.6
TOP3B-217ENST00000489581 MT3P25713 68 aa5.06□□□□□ -1.6
TOP3B-217ENST00000489581 LCE3CQ5T5A8 94 aa5.06□□□□□ -1.6
TOP3B-217ENST00000489581 AHNAKQ09666 5890 aaKnown RBP5.05□□□□□ -1.6
TOP3B-217ENST00000489581 OBSCNQ5VST9 7968 aa5.04□□□□□ -1.6
TOP3B-217ENST00000489581 MUC5BQ9HC84 5762 aaPredicted RBP5.04□□□□□ -1.6
TOP3B-217ENST00000489581 NDUFAF8A1L188 74 aa5.04□□□□□ -1.6
TOP3B-217ENST00000489581 KRTAP5-11Q6L8G4 156 aa4.97□□□□□ -1.61
TOP3B-217ENST00000489581 KRTAP6-2Q3LI66 62 aa4.96□□□□□ -1.62
TOP3B-217ENST00000489581 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.93□□□□□ -1.62
TOP3B-217ENST00000489581 LUZP6Q538Z0 58 aa4.85□□□□□ -1.63
TOP3B-217ENST00000489581 KRTAP9-6A8MVA2 160 aa4.81□□□□□ -1.64
TOP3B-217ENST00000489581 LCE1EQ5T753 118 aa4.75□□□□□ -1.65
TOP3B-217ENST00000489581 KRTAP5-1Q6L8H4 278 aa4.74□□□□□ -1.65
TOP3B-217ENST00000489581 LCE1FQ5T754 118 aa4.5□□□□□ -1.69
TOP3B-217ENST00000489581 INE1O15225 51 aa4.29□□□□□ -1.72
TOP3B-217ENST00000489581 LCE1BQ5T7P3 118 aa4.2□□□□□ -1.74
TOP3B-217ENST00000489581 KRTAP4-4Q9BYR3 166 aa4.11□□□□□ -1.75
TOP3B-217ENST00000489581 LCE1CQ5T751 118 aa4.06□□□□□ -1.76
TOP3B-217ENST00000489581 LCE3EQ5T5B0 92 aa3.79□□□□□ -1.8
TOP3B-217ENST00000489581 PHGR1C9JFL3 82 aa3.57□□□□□ -1.84
TOP3B-217ENST00000489581 LCE3DQ9BYE3 92 aa3.57□□□□□ -1.84
TOP3B-217ENST00000489581 KRTAP21-2Q3LI59 83 aa3.35□□□□□ -1.87
TOP3B-217ENST00000489581 MUC19Q7Z5P9 8384 aa3.14□□□□□ -1.91
TOP3B-217ENST00000489581 KRTAP21-1Q3LI58 79 aa2.69□□□□□ -1.98
TOP3B-217ENST00000489581 PRM1P04553 51 aa2.63□□□□□ -1.99
TOP3B-217ENST00000489581 MUC16Q8WXI7 14507 aa2.2□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 9.9 ms