RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 KRTAP8-1Q8IUC2 63 aa3.25□□□□□ -1.89
SF1-218ENST00000489544 PRO0628Q9UI54 55 aa3.25□□□□□ -1.89
SF1-218ENST00000489544 A6NED7 52 aa3.23□□□□□ -1.89
SF1-218ENST00000489544 C10orf95Q9H7T3 257 aa3.23□□□□□ -1.89
SF1-218ENST00000489544 SPRR2FQ96RM1 72 aa3.22□□□□□ -1.89
SF1-218ENST00000489544 KRTAP2-3P0C7H8 128 aa3.2□□□□□ -1.9
SF1-218ENST00000489544 KRTAP2-4Q9BYR9 128 aa3.2□□□□□ -1.9
SF1-218ENST00000489544 PRAC1Q96KF2 57 aa3.19□□□□□ -1.9
SF1-218ENST00000489544 K7ERS5 55 aa3.14□□□□□ -1.91
SF1-218ENST00000489544 SPRR2EP22531 72 aa3.14□□□□□ -1.91
SF1-218ENST00000489544 SPRR2BP35325 72 aa3.14□□□□□ -1.91
SF1-218ENST00000489544 SPRR2AP35326 72 aa3.14□□□□□ -1.91
SF1-218ENST00000489544 TNP1P09430 55 aa3.13□□□□□ -1.91
SF1-218ENST00000489544 PMAIP1Q13794 54 aa3.12□□□□□ -1.91
SF1-218ENST00000489544 KRTAP19-7Q3SYF9 63 aa3.11□□□□□ -1.91
SF1-218ENST00000489544 LCE3AQ5TA76 89 aa3.11□□□□□ -1.91
SF1-218ENST00000489544 CDC42SE1Q9NRR8 79 aa3.11□□□□□ -1.91
SF1-218ENST00000489544 LCE1AQ5T7P2 110 aa3.1□□□□□ -1.91
SF1-218ENST00000489544 KRTAP19-5Q3LI72 72 aa3.09□□□□□ -1.91
SF1-218ENST00000489544 KRTAP2-2Q9BYT5 123 aa3.09□□□□□ -1.91
SF1-218ENST00000489544 KRTAP2-1Q9BYU5 128 aa3.09□□□□□ -1.91
SF1-218ENST00000489544 MT1EP04732 61 aa3.07□□□□□ -1.92
SF1-218ENST00000489544 SPRR2DP22532 72 aa3.04□□□□□ -1.92
SF1-218ENST00000489544 KRTAP25-1Q3LHN0 102 aa3.04□□□□□ -1.92
SF1-218ENST00000489544 ROMO1P60602 79 aa3□□□□□ -1.93
SF1-218ENST00000489544 KRTAP19-3Q7Z4W3 81 aa2.99□□□□□ -1.93
SF1-218ENST00000489544 BRK1Q8WUW1 75 aa2.99□□□□□ -1.93
SF1-218ENST00000489544 GPR98Q8WXG9 6306 aa2.98□□□□□ -1.93
SF1-218ENST00000489544 KRTAP12-3P60328 96 aa2.96□□□□□ -1.94
SF1-218ENST00000489544 MT1LQ93083 61 aa2.96□□□□□ -1.94
SF1-218ENST00000489544 MT1GP13640 62 aa2.92□□□□□ -1.94
SF1-218ENST00000489544 MT1MQ8N339 61 aa2.91□□□□□ -1.94
SF1-218ENST00000489544 KTN1-AS1Q86SY8 53 aa2.89□□□□□ -1.95
SF1-218ENST00000489544 KRTAP4-3Q9BYR4 195 aa2.89□□□□□ -1.95
SF1-218ENST00000489544 DSTQ03001 7570 aaKnown RBP2.88□□□□□ -1.95
SF1-218ENST00000489544 PP632Q6XCG6 107 aa2.88□□□□□ -1.95
SF1-218ENST00000489544 LUZP6Q538Z0 58 aa2.86□□□□□ -1.95
SF1-218ENST00000489544 NDUFAF8A1L188 74 aa2.81□□□□□ -1.96
SF1-218ENST00000489544 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.77□□□□□ -1.97
SF1-218ENST00000489544 LCE3CQ5T5A8 94 aa2.74□□□□□ -1.97
SF1-218ENST00000489544 KRTAP5-11Q6L8G4 156 aa2.74□□□□□ -1.97
SF1-218ENST00000489544 MT4P47944 62 aa2.68□□□□□ -1.98
SF1-218ENST00000489544 HMCN1Q96RW7 5635 aa2.68□□□□□ -1.98
SF1-218ENST00000489544 KRTAP5-4Q6L8H1 288 aa2.65□□□□□ -1.99
SF1-218ENST00000489544 KRTAP5-5Q701N2 237 aaPredicted RBP2.64□□□□□ -1.99
SF1-218ENST00000489544 KRTAP9-6A8MVA2 160 aa2.63□□□□□ -1.99
SF1-218ENST00000489544 AHNAK2Q8IVF2 5795 aa2.62□□□□□ -1.99
SF1-218ENST00000489544 LCE1EQ5T753 118 aa2.61□□□□□ -1.99
SF1-218ENST00000489544 KRTAP5-10Q6L8G5 202 aa2.59□□□□□ -1.99
SF1-218ENST00000489544 SYNE1Q8NF91 8797 aaKnown RBP2.54□□□□□ -2
SF1-218ENST00000489544 KRTAP6-1Q3LI64 71 aa2.52□□□□□ -2.01
SF1-218ENST00000489544 MT1AP04731 61 aa2.51□□□□□ -2.01
SF1-218ENST00000489544 KRTAP12-4P60329 112 aa2.5□□□□□ -2.01
SF1-218ENST00000489544 KRTAP20-2Q3LI61 65 aa2.5□□□□□ -2.01
SF1-218ENST00000489544 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
SF1-218ENST00000489544 SPRR5A0A1B0GTR4 108 aa2.46□□□□□ -2.02
SF1-218ENST00000489544 MT3P25713 68 aa2.45□□□□□ -2.02
SF1-218ENST00000489544 KRTAP5-1Q6L8H4 278 aa2.39□□□□□ -2.03
SF1-218ENST00000489544 KRTAP6-2Q3LI66 62 aa2.36□□□□□ -2.03
SF1-218ENST00000489544 KRTAP5-2Q701N4 177 aa2.35□□□□□ -2.03
SF1-218ENST00000489544 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
SF1-218ENST00000489544 AHNAKQ09666 5890 aaKnown RBP2.26□□□□□ -2.05
SF1-218ENST00000489544 OBSCNQ5VST9 7968 aa2.22□□□□□ -2.05
SF1-218ENST00000489544 KRTAP5-8O75690 187 aa2.21□□□□□ -2.06
SF1-218ENST00000489544 LCE1FQ5T754 118 aa2.21□□□□□ -2.06
SF1-218ENST00000489544 MUC5BQ9HC84 5762 aaPredicted RBP2.21□□□□□ -2.06
SF1-218ENST00000489544 MUC5ACP98088 5654 aa2.14□□□□□ -2.07
SF1-218ENST00000489544 INE1O15225 51 aa2.12□□□□□ -2.07
SF1-218ENST00000489544 LCE3DQ9BYE3 92 aa2.01□□□□□ -2.09
SF1-218ENST00000489544 LCE1BQ5T7P3 118 aa1.95□□□□□ -2.1
SF1-218ENST00000489544 LCE3EQ5T5B0 92 aa1.92□□□□□ -2.1
SF1-218ENST00000489544 LCE1CQ5T751 118 aa1.88□□□□□ -2.11
SF1-218ENST00000489544 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
SF1-218ENST00000489544 PRM1P04553 51 aa1.57□□□□□ -2.16
SF1-218ENST00000489544 PHGR1C9JFL3 82 aa1.53□□□□□ -2.16
SF1-218ENST00000489544 MUC19Q7Z5P9 8384 aa1.41□□□□□ -2.18
SF1-218ENST00000489544 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
SF1-218ENST00000489544 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 6 ms