RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 UBL5Q9BZL1 73 aa4.75□□□□□ -1.65
UFD1-209ENST00000489406 C10orf95Q9H7T3 257 aa4.75□□□□□ -1.65
UFD1-209ENST00000489406 PRO0628Q9UI54 55 aa4.75□□□□□ -1.65
UFD1-209ENST00000489406 H0Y9P7 68 aa4.71□□□□□ -1.66
UFD1-209ENST00000489406 UQCRQO14949 82 aa4.68□□□□□ -1.66
UFD1-209ENST00000489406 ATOX1O00244 68 aa4.67□□□□□ -1.66
UFD1-209ENST00000489406 H3BT86 120 aa4.66□□□□□ -1.66
UFD1-209ENST00000489406 CCDC179H3BU77 68 aa4.66□□□□□ -1.66
UFD1-209ENST00000489406 PSPHP1O15172 72 aa4.64□□□□□ -1.67
UFD1-209ENST00000489406 TMEM258P61165 79 aa4.63□□□□□ -1.67
UFD1-209ENST00000489406 LCE3AQ5TA76 89 aa4.62□□□□□ -1.67
UFD1-209ENST00000489406 KRTAP13-4Q3LI77 160 aa4.61□□□□□ -1.67
UFD1-209ENST00000489406 LINC00643Q86TS7 51 aa4.61□□□□□ -1.67
UFD1-209ENST00000489406 SMIM26A0A096LP01 95 aa4.6□□□□□ -1.67
UFD1-209ENST00000489406 COX7CP15954 63 aa4.59□□□□□ -1.67
UFD1-209ENST00000489406 PMAIP1Q13794 54 aa4.58□□□□□ -1.68
UFD1-209ENST00000489406 LINC00208Q96KT6 92 aa4.55□□□□□ -1.68
UFD1-209ENST00000489406 HIST1H4AP62805 103 aaKnown RBP4.54□□□□□ -1.68
UFD1-209ENST00000489406 KRTAP5-1Q6L8H4 278 aa4.52□□□□□ -1.69
UFD1-209ENST00000489406 DMAC1Q96GE9 116 aa4.52□□□□□ -1.69
UFD1-209ENST00000489406 SERP2Q8N6R1 65 aa4.51□□□□□ -1.69
UFD1-209ENST00000489406 ATP5EP2Q5VTU8 51 aa4.49□□□□□ -1.69
UFD1-209ENST00000489406 MP68P56378 58 aa4.48□□□□□ -1.69
UFD1-209ENST00000489406 ATP5EP56381 51 aaPredicted RBP4.48□□□□□ -1.69
UFD1-209ENST00000489406 SERP1Q9Y6X1 66 aa4.48□□□□□ -1.69
UFD1-209ENST00000489406 KRTAP6-1Q3LI64 71 aa4.46□□□□□ -1.7
UFD1-209ENST00000489406 KRTAP6-2Q3LI66 62 aa4.46□□□□□ -1.7
UFD1-209ENST00000489406 KRTAP12-3P60328 96 aa4.41□□□□□ -1.7
UFD1-209ENST00000489406 MT1AP04731 61 aa4.39□□□□□ -1.71
UFD1-209ENST00000489406 TRAV7A0A075B6U4 112 aa4.38□□□□□ -1.71
UFD1-209ENST00000489406 SPINT4Q6UDR6 99 aa4.37□□□□□ -1.71
UFD1-209ENST00000489406 SPTSSBQ8NFR3 76 aa4.36□□□□□ -1.71
UFD1-209ENST00000489406 H7BZZ5 65 aa4.32□□□□□ -1.72
UFD1-209ENST00000489406 MT3P25713 68 aa4.29□□□□□ -1.72
UFD1-209ENST00000489406 TNP1P09430 55 aa4.28□□□□□ -1.72
UFD1-209ENST00000489406 KRTAP5-11Q6L8G4 156 aa4.28□□□□□ -1.72
UFD1-209ENST00000489406 BRK1Q8WUW1 75 aa4.27□□□□□ -1.73
UFD1-209ENST00000489406 ACYP2P14621 99 aa4.23□□□□□ -1.73
UFD1-209ENST00000489406 NDUFAF8A1L188 74 aa4.22□□□□□ -1.73
UFD1-209ENST00000489406 Q1T7F1 81 aa4.22□□□□□ -1.73
UFD1-209ENST00000489406 LUZP6Q538Z0 58 aa4.22□□□□□ -1.73
UFD1-209ENST00000489406 KRTAP12-1P59990 96 aa4.21□□□□□ -1.74
UFD1-209ENST00000489406 KTN1-AS1Q86SY8 53 aa4.2□□□□□ -1.74
UFD1-209ENST00000489406 LCE1EQ5T753 118 aa4.19□□□□□ -1.74
UFD1-209ENST00000489406 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.19□□□□□ -1.74
UFD1-209ENST00000489406 CHKB-CPT1BH3BT56 60 aa4.16□□□□□ -1.74
UFD1-209ENST00000489406 SPATA8Q6RVD6 105 aa4.15□□□□□ -1.75
UFD1-209ENST00000489406 K7ERS5 55 aa4.13□□□□□ -1.75
UFD1-209ENST00000489406 SNURFQ9Y675 71 aa4.12□□□□□ -1.75
UFD1-209ENST00000489406 H3BPC8 53 aa4.09□□□□□ -1.75
UFD1-209ENST00000489406 SPANXA2-OT1Q8N9U9 137 aa4.06□□□□□ -1.76
UFD1-209ENST00000489406 A6NED7 52 aa4.03□□□□□ -1.76
UFD1-209ENST00000489406 CDC42SE1Q9NRR8 79 aa4□□□□□ -1.77
UFD1-209ENST00000489406 KRTAP25-1Q3LHN0 102 aa3.98□□□□□ -1.77
UFD1-209ENST00000489406 LCE3CQ5T5A8 94 aa3.96□□□□□ -1.78
UFD1-209ENST00000489406 LCE1FQ5T754 118 aa3.92□□□□□ -1.78
UFD1-209ENST00000489406 LINC01558Q9Y6Z2 57 aa3.91□□□□□ -1.78
UFD1-209ENST00000489406 PRR15LQ9BU68 103 aa3.9□□□□□ -1.79
UFD1-209ENST00000489406 A0A1B0GU33 70 aa3.87□□□□□ -1.79
UFD1-209ENST00000489406 LCE1BQ5T7P3 118 aa3.87□□□□□ -1.79
UFD1-209ENST00000489406 COA5Q86WW8 74 aa3.82□□□□□ -1.8
UFD1-209ENST00000489406 A8MU10 97 aa3.8□□□□□ -1.8
UFD1-209ENST00000489406 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
UFD1-209ENST00000489406 PHGR1C9JFL3 82 aa3.77□□□□□ -1.81
UFD1-209ENST00000489406 ROMO1P60602 79 aa3.69□□□□□ -1.82
UFD1-209ENST00000489406 UQCR11O14957 56 aa3.68□□□□□ -1.82
UFD1-209ENST00000489406 LCE1CQ5T751 118 aa3.66□□□□□ -1.82
UFD1-209ENST00000489406 A0A1B0GU69 56 aa3.64□□□□□ -1.83
UFD1-209ENST00000489406 MIR22HGQ0VDD5 57 aa3.64□□□□□ -1.83
UFD1-209ENST00000489406 KRTAP4-4Q9BYR3 166 aa3.5□□□□□ -1.85
UFD1-209ENST00000489406 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
UFD1-209ENST00000489406 INE1O15225 51 aa3.09□□□□□ -1.91
UFD1-209ENST00000489406 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
UFD1-209ENST00000489406 KRTAP21-2Q3LI59 83 aa2.94□□□□□ -1.94
UFD1-209ENST00000489406 KRTAP21-1Q3LI58 79 aa2.85□□□□□ -1.95
UFD1-209ENST00000489406 LCE3DQ9BYE3 92 aa2.7□□□□□ -1.98
UFD1-209ENST00000489406 MUC16Q8WXI7 14507 aa2.06□□□□□ -2.08
UFD1-209ENST00000489406 PRM1P04553 51 aa1.71□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 177.2 ms