RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 KRTAP4-7Q9BYR0 210 aa4.86□□□□□ -1.63
TOP3A-206ENST00000489131 MUC12Q9UKN1 5478 aa4.84□□□□□ -1.63
TOP3A-206ENST00000489131 KRTAP12-3P60328 96 aa4.78□□□□□ -1.64
TOP3A-206ENST00000489131 KRTAP19-7Q3SYF9 63 aa4.78□□□□□ -1.64
TOP3A-206ENST00000489131 KRTAP19-5Q3LI72 72 aa4.77□□□□□ -1.65
TOP3A-206ENST00000489131 KMT2DO14686 5537 aa4.76□□□□□ -1.65
TOP3A-206ENST00000489131 KRTAP4-9Q9BYQ8 210 aa4.75□□□□□ -1.65
TOP3A-206ENST00000489131 KRTAP20-1Q3LI63 56 aa4.73□□□□□ -1.65
TOP3A-206ENST00000489131 KRTAP5-9P26371 169 aa4.72□□□□□ -1.65
TOP3A-206ENST00000489131 KRTAP19-4Q3LI73 84 aa4.71□□□□□ -1.66
TOP3A-206ENST00000489131 MT1EP04732 61 aa4.7□□□□□ -1.66
TOP3A-206ENST00000489131 MDN1Q9NU22 5596 aa4.68□□□□□ -1.66
TOP3A-206ENST00000489131 KRTAP15-1Q3LI76 137 aa4.67□□□□□ -1.66
TOP3A-206ENST00000489131 LCE4AQ5TA78 99 aa4.65□□□□□ -1.67
TOP3A-206ENST00000489131 KRTAP4-2Q9BYR5 136 aa4.63□□□□□ -1.67
TOP3A-206ENST00000489131 SPRR2FQ96RM1 72 aa4.62□□□□□ -1.67
TOP3A-206ENST00000489131 MT1LQ93083 61 aa4.59□□□□□ -1.67
TOP3A-206ENST00000489131 KRTAP4-11Q9BYQ6 195 aa4.57□□□□□ -1.68
TOP3A-206ENST00000489131 KRTAP19-3Q7Z4W3 81 aa4.54□□□□□ -1.68
TOP3A-206ENST00000489131 KRTAP2-3P0C7H8 128 aa4.53□□□□□ -1.68
TOP3A-206ENST00000489131 KRTAP2-4Q9BYR9 128 aa4.53□□□□□ -1.68
TOP3A-206ENST00000489131 MT1GP13640 62 aa4.5□□□□□ -1.69
TOP3A-206ENST00000489131 LCE5AQ5TCM9 118 aa4.5□□□□□ -1.69
TOP3A-206ENST00000489131 LCE1AQ5T7P2 110 aa4.49□□□□□ -1.69
TOP3A-206ENST00000489131 LCE3CQ5T5A8 94 aa4.47□□□□□ -1.69
TOP3A-206ENST00000489131 SPRR2EP22531 72 aa4.46□□□□□ -1.7
TOP3A-206ENST00000489131 SPRR2BP35325 72 aa4.46□□□□□ -1.7
TOP3A-206ENST00000489131 SPRR2AP35326 72 aa4.46□□□□□ -1.7
TOP3A-206ENST00000489131 SPRR5A0A1B0GTR4 108 aa4.44□□□□□ -1.7
TOP3A-206ENST00000489131 MT1MQ8N339 61 aa4.43□□□□□ -1.7
TOP3A-206ENST00000489131 KRTAP2-2Q9BYT5 123 aa4.37□□□□□ -1.71
TOP3A-206ENST00000489131 KRTAP2-1Q9BYU5 128 aa4.37□□□□□ -1.71
TOP3A-206ENST00000489131 SPRR2DP22532 72 aa4.32□□□□□ -1.72
TOP3A-206ENST00000489131 KRTAP4-3Q9BYR4 195 aa4.26□□□□□ -1.73
TOP3A-206ENST00000489131 KRTAP9-6A8MVA2 160 aa4.21□□□□□ -1.74
TOP3A-206ENST00000489131 A0A0A0MQY5 61 aa4.14□□□□□ -1.75
TOP3A-206ENST00000489131 KRTAP5-3Q6L8H2 238 aa4.14□□□□□ -1.75
TOP3A-206ENST00000489131 LUZP6Q538Z0 58 aa4.12□□□□□ -1.75
TOP3A-206ENST00000489131 GPR98Q8WXG9 6306 aa4.1□□□□□ -1.75
TOP3A-206ENST00000489131 DSTQ03001 7570 aaKnown RBP4.07□□□□□ -1.76
TOP3A-206ENST00000489131 KRTAP5-5Q701N2 237 aaPredicted RBP4.06□□□□□ -1.76
TOP3A-206ENST00000489131 KRTAP5-4Q6L8H1 288 aa3.93□□□□□ -1.78
TOP3A-206ENST00000489131 MT1AP04731 61 aa3.92□□□□□ -1.78
TOP3A-206ENST00000489131 NDUFAF8A1L188 74 aa3.91□□□□□ -1.78
TOP3A-206ENST00000489131 HMCN1Q96RW7 5635 aa3.86□□□□□ -1.79
TOP3A-206ENST00000489131 KRTAP6-1Q3LI64 71 aa3.84□□□□□ -1.79
TOP3A-206ENST00000489131 MT4P47944 62 aa3.8□□□□□ -1.8
TOP3A-206ENST00000489131 AHNAK2Q8IVF2 5795 aa3.78□□□□□ -1.8
TOP3A-206ENST00000489131 KRTAP12-4P60329 112 aa3.73□□□□□ -1.81
TOP3A-206ENST00000489131 KRTAP5-10Q6L8G5 202 aa3.73□□□□□ -1.81
TOP3A-206ENST00000489131 SYNE1Q8NF91 8797 aaKnown RBP3.67□□□□□ -1.82
TOP3A-206ENST00000489131 KRTAP20-2Q3LI61 65 aa3.63□□□□□ -1.83
TOP3A-206ENST00000489131 KRTAP5-7Q6L8G8 165 aa3.61□□□□□ -1.83
TOP3A-206ENST00000489131 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
TOP3A-206ENST00000489131 MT3P25713 68 aa3.54□□□□□ -1.84
TOP3A-206ENST00000489131 KRTAP6-2Q3LI66 62 aa3.54□□□□□ -1.84
TOP3A-206ENST00000489131 INE1O15225 51 aa3.32□□□□□ -1.88
TOP3A-206ENST00000489131 LCE3DQ9BYE3 92 aa3.32□□□□□ -1.88
TOP3A-206ENST00000489131 LCE3EQ5T5B0 92 aa3.23□□□□□ -1.89
TOP3A-206ENST00000489131 MUC5ACP98088 5654 aa3.18□□□□□ -1.9
TOP3A-206ENST00000489131 MUC5BQ9HC84 5762 aaPredicted RBP3.18□□□□□ -1.9
TOP3A-206ENST00000489131 AHNAKQ09666 5890 aaKnown RBP3.18□□□□□ -1.9
TOP3A-206ENST00000489131 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
TOP3A-206ENST00000489131 KRTAP5-8O75690 187 aa3.15□□□□□ -1.91
TOP3A-206ENST00000489131 OBSCNQ5VST9 7968 aa3.14□□□□□ -1.91
TOP3A-206ENST00000489131 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.12□□□□□ -1.91
TOP3A-206ENST00000489131 KRTAP5-1Q6L8H4 278 aa3.06□□□□□ -1.92
TOP3A-206ENST00000489131 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
TOP3A-206ENST00000489131 LCE1CQ5T751 118 aa2.93□□□□□ -1.94
TOP3A-206ENST00000489131 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
TOP3A-206ENST00000489131 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
TOP3A-206ENST00000489131 PRM1P04553 51 aa2.73□□□□□ -1.97
TOP3A-206ENST00000489131 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
TOP3A-206ENST00000489131 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
TOP3A-206ENST00000489131 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
TOP3A-206ENST00000489131 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
TOP3A-206ENST00000489131 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
TOP3A-206ENST00000489131 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 44 ms