RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 DDX60Q8IY21 1712 aaKnown RBP-0.79□□□□□ -2.54
RFC4-213ENST00000489028 MUC3AQ02505 3323 aa-0.8□□□□□ -2.54
RFC4-213ENST00000489028 NRXN3Q9Y4C0 1643 aa-0.81□□□□□ -2.54
RFC4-213ENST00000489028 MT1FP04733 61 aa-0.81□□□□□ -2.54
RFC4-213ENST00000489028 DEFB131AP59861 70 aa-0.81□□□□□ -2.54
RFC4-213ENST00000489028 RPS29P62273 56 aaKnown RBP-0.81□□□□□ -2.54
RFC4-213ENST00000489028 NFAT5O94916 1531 aa-0.81□□□□□ -2.54
RFC4-213ENST00000489028 EP400Q96L91 3159 aa-0.83□□□□□ -2.54
RFC4-213ENST00000489028 PRXQ9BXM0 1461 aa-0.83□□□□□ -2.54
RFC4-213ENST00000489028 CLTCL1P53675 1640 aa-0.83□□□□□ -2.54
RFC4-213ENST00000489028 ABCA5Q8WWZ7 1642 aa-0.83□□□□□ -2.54
RFC4-213ENST00000489028 USP34Q70CQ2 3546 aa-0.84□□□□□ -2.54
RFC4-213ENST00000489028 DCHS1Q96JQ0 3298 aa-0.84□□□□□ -2.54
RFC4-213ENST00000489028 XIRP2A4UGR9 3374 aa-0.84□□□□□ -2.54
RFC4-213ENST00000489028 DNAH12Q6ZR08 3092 aa-0.84□□□□□ -2.54
RFC4-213ENST00000489028 MKI67P46013 3256 aaKnown RBP-0.84□□□□□ -2.54
RFC4-213ENST00000489028 PLNP26678 52 aa-0.85□□□□□ -2.55
RFC4-213ENST00000489028 DNAH14Q0VDD8 3507 aa-0.85□□□□□ -2.55
RFC4-213ENST00000489028 KRTAP19-6Q3LI70 58 aa-0.85□□□□□ -2.55
RFC4-213ENST00000489028 CENPEQ02224 2701 aa-0.86□□□□□ -2.55
RFC4-213ENST00000489028 CFAP47Q6ZTR5 3102 aa-0.87□□□□□ -2.55
RFC4-213ENST00000489028 SMIM2Q9BVW6 85 aa-0.87□□□□□ -2.55
RFC4-213ENST00000489028 UNC80Q8N2C7 3258 aa-0.88□□□□□ -2.55
RFC4-213ENST00000489028 ABCC8Q09428 1581 aa-0.88□□□□□ -2.55
RFC4-213ENST00000489028 TRPM2O94759 1503 aa-0.89□□□□□ -2.55
RFC4-213ENST00000489028 ADCY10Q96PN6 1610 aa-0.89□□□□□ -2.55
RFC4-213ENST00000489028 FANCD2Q9BXW9 1451 aa-0.9□□□□□ -2.55
RFC4-213ENST00000489028 LOC400499M0QZD8 3231 aa-0.9□□□□□ -2.55
RFC4-213ENST00000489028 ASPMQ8IZT6 3477 aa-0.92□□□□□ -2.56
RFC4-213ENST00000489028 ERICH3Q5RHP9 1530 aa-0.92□□□□□ -2.56
RFC4-213ENST00000489028 NDUFA1O15239 70 aa-0.92□□□□□ -2.56
RFC4-213ENST00000489028 CMC2Q9NRP2 79 aa-0.94□□□□□ -2.56
RFC4-213ENST00000489028 BRCA2P51587 3418 aa-0.96□□□□□ -2.56
RFC4-213ENST00000489028 TOMM7Q9P0U1 55 aa-0.96□□□□□ -2.56
RFC4-213ENST00000489028 TTTY10Q9BZA0 68 aa-0.97□□□□□ -2.56
RFC4-213ENST00000489028 DUOX1Q9NRD9 1551 aa-0.97□□□□□ -2.56
RFC4-213ENST00000489028 KRTAP19-2Q3LHN2 52 aa-0.98□□□□□ -2.57
RFC4-213ENST00000489028 A0A096LNI7 61 aa-0.99□□□□□ -2.57
RFC4-213ENST00000489028 DEFB133Q30KQ1 61 aa-0.99□□□□□ -2.57
RFC4-213ENST00000489028 LINC01590Q5TEZ4 76 aa-0.99□□□□□ -2.57
RFC4-213ENST00000489028 VCANP13611 3396 aa-0.99□□□□□ -2.57
RFC4-213ENST00000489028 CENPFP49454 3210 aa-1□□□□□ -2.57
RFC4-213ENST00000489028 RHPN1-AS1Q9BWJ2 59 aa-1□□□□□ -2.57
RFC4-213ENST00000489028 CDH23Q9H251 3354 aa-1.01□□□□□ -2.57
RFC4-213ENST00000489028 RPL39P62891 51 aaKnown RBP-1.01□□□□□ -2.57
RFC4-213ENST00000489028 HTN1P15515 57 aa-1.02□□□□□ -2.57
RFC4-213ENST00000489028 SAMD9LQ8IVG5 1584 aa-1.02□□□□□ -2.57
RFC4-213ENST00000489028 TOP2AP11388 1531 aaKnown RBP-1.04□□□□□ -2.58
RFC4-213ENST00000489028 VPS13AQ96RL7 3174 aa-1.05□□□□□ -2.58
RFC4-213ENST00000489028 RPL39LQ96EH5 51 aaKnown RBP-1.05□□□□□ -2.58
RFC4-213ENST00000489028 DEFB124Q8NES8 71 aa-1.06□□□□□ -2.58
RFC4-213ENST00000489028 DEFB104AQ8WTQ1 72 aa-1.06□□□□□ -2.58
RFC4-213ENST00000489028 IQGAP2Q13576 1575 aa-1.06□□□□□ -2.58
RFC4-213ENST00000489028 MROH2BQ7Z745 1585 aa-1.07□□□□□ -2.58
RFC4-213ENST00000489028 SNRPGP15A8MWD9 76 aa-1.07□□□□□ -2.58
RFC4-213ENST00000489028 ATP7AQ04656 1500 aa-1.07□□□□□ -2.58
RFC4-213ENST00000489028 CD52P31358 61 aa-1.09□□□□□ -2.58
RFC4-213ENST00000489028 TOMM5Q8N4H5 51 aa-1.14□□□□□ -2.59
RFC4-213ENST00000489028 UTRNP46939 3433 aa-1.14□□□□□ -2.59
RFC4-213ENST00000489028 LINC01556Q5JQF7 62 aa-1.15□□□□□ -2.59
RFC4-213ENST00000489028 H3BUX3 64 aa-1.2□□□□□ -2.6
RFC4-213ENST00000489028 K7EIM0 57 aa-1.23□□□□□ -2.61
RFC4-213ENST00000489028 GCC2Q8IWJ2 1684 aa-1.24□□□□□ -2.61
RFC4-213ENST00000489028 A0A096LPF7 62 aa-1.25□□□□□ -2.61
RFC4-213ENST00000489028 APELAP0DMC3 54 aa-1.25□□□□□ -2.61
RFC4-213ENST00000489028 ARHGAP5-AS1Q96IT6 56 aa-1.27□□□□□ -2.61
RFC4-213ENST00000489028 PRCDQ00LT1 54 aa-1.29□□□□□ -2.62
RFC4-213ENST00000489028 GOLGB1Q14789 3259 aaKnown RBP-1.3□□□□□ -2.62
RFC4-213ENST00000489028 TMEM167AQ8TBQ9 72 aa-1.33□□□□□ -2.62
RFC4-213ENST00000489028 SNRPGP62308 76 aaKnown RBP-1.34□□□□□ -2.62
RFC4-213ENST00000489028 HTN3P15516 51 aa-1.35□□□□□ -2.63
RFC4-213ENST00000489028 H3BSH0 61 aa-1.37□□□□□ -2.63
RFC4-213ENST00000489028 RPL39P5Q59GN2 51 aa-1.37□□□□□ -2.63
RFC4-213ENST00000489028 DEFB108AA8MXU0 73 aa-1.4□□□□□ -2.63
RFC4-213ENST00000489028 Q9Y3F1 56 aa-1.49□□□□□ -2.65
RFC4-213ENST00000489028 DEFB108BQ8NET1 73 aa-1.55□□□□□ -2.66
RFC4-213ENST00000489028 COX14Q96I36 57 aa-1.56□□□□□ -2.66
RFC4-213ENST00000489028 STATHP02808 62 aa-1.71□□□□□ -2.68
Retrieved 78 of 20,778 RNA–protein pairs in 176.6 ms