RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 DSTQ03001 7570 aaKnown RBP3.03□□□□□ -1.92
BEST3-205ENST00000488961 KRTAP9-3Q9BYQ3 159 aa3.02□□□□□ -1.93
BEST3-205ENST00000488961 LCE4AQ5TA78 99 aa3□□□□□ -1.93
BEST3-205ENST00000488961 SSPOA2VEC9 5147 aa3□□□□□ -1.93
BEST3-205ENST00000488961 KRTAP10-12P60413 245 aa2.96□□□□□ -1.94
BEST3-205ENST00000488961 KRTAP19-8Q3LI54 63 aa2.96□□□□□ -1.94
BEST3-205ENST00000488961 MUC12Q9UKN1 5478 aa2.95□□□□□ -1.94
BEST3-205ENST00000488961 KRTAP19-4Q3LI73 84 aa2.94□□□□□ -1.94
BEST3-205ENST00000488961 FCGBPQ9Y6R7 5405 aaPredicted RBP2.92□□□□□ -1.94
BEST3-205ENST00000488961 KRTAP9-7A8MTY7 169 aa2.92□□□□□ -1.94
BEST3-205ENST00000488961 KRTAP12-3P60328 96 aa2.91□□□□□ -1.94
BEST3-205ENST00000488961 KRTAP8-1Q8IUC2 63 aa2.9□□□□□ -1.95
BEST3-205ENST00000488961 KRTAP19-5Q3LI72 72 aa2.88□□□□□ -1.95
BEST3-205ENST00000488961 CRCT1Q9UGL9 99 aa2.82□□□□□ -1.96
BEST3-205ENST00000488961 OBSCNQ5VST9 7968 aa2.82□□□□□ -1.96
BEST3-205ENST00000488961 SYNE2Q8WXH0 6885 aaKnown RBP2.81□□□□□ -1.96
BEST3-205ENST00000488961 MACF1Q9UPN3 7388 aaKnown RBP2.8□□□□□ -1.96
BEST3-205ENST00000488961 SYNE1Q8NF91 8797 aaKnown RBP2.78□□□□□ -1.96
BEST3-205ENST00000488961 KRTAP9-6A8MVA2 160 aa2.74□□□□□ -1.97
BEST3-205ENST00000488961 GPR98Q8WXG9 6306 aa2.73□□□□□ -1.97
BEST3-205ENST00000488961 KRTAP4-3Q9BYR4 195 aa2.72□□□□□ -1.97
BEST3-205ENST00000488961 MDN1Q9NU22 5596 aa2.72□□□□□ -1.97
BEST3-205ENST00000488961 LCE1FQ5T754 118 aa2.71□□□□□ -1.98
BEST3-205ENST00000488961 KRTAP19-7Q3SYF9 63 aa2.71□□□□□ -1.98
BEST3-205ENST00000488961 LCE3CQ5T5A8 94 aa2.7□□□□□ -1.98
BEST3-205ENST00000488961 LCE1EQ5T753 118 aa2.64□□□□□ -1.99
BEST3-205ENST00000488961 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.64□□□□□ -1.99
BEST3-205ENST00000488961 KRTAP2-3P0C7H8 128 aa2.63□□□□□ -1.99
BEST3-205ENST00000488961 KRTAP19-6Q3LI70 58 aa2.63□□□□□ -1.99
BEST3-205ENST00000488961 KRTAP2-4Q9BYR9 128 aa2.63□□□□□ -1.99
BEST3-205ENST00000488961 KRTAP2-1Q9BYU5 128 aa2.63□□□□□ -1.99
BEST3-205ENST00000488961 MT1EP04732 61 aa2.61□□□□□ -1.99
BEST3-205ENST00000488961 MT1LQ93083 61 aa2.6□□□□□ -1.99
BEST3-205ENST00000488961 KRTAP2-2Q9BYT5 123 aa2.6□□□□□ -1.99
BEST3-205ENST00000488961 MT1GP13640 62 aa2.59□□□□□ -1.99
BEST3-205ENST00000488961 LCE1AQ5T7P2 110 aa2.55□□□□□ -2
BEST3-205ENST00000488961 SPRR2FQ96RM1 72 aa2.54□□□□□ -2
BEST3-205ENST00000488961 MUC5BQ9HC84 5762 aaPredicted RBP2.54□□□□□ -2
BEST3-205ENST00000488961 KRTAP12-4P60329 112 aa2.51□□□□□ -2.01
BEST3-205ENST00000488961 LCE3EQ5T5B0 92 aa2.5□□□□□ -2.01
BEST3-205ENST00000488961 KRTAP20-1Q3LI63 56 aa2.47□□□□□ -2.01
BEST3-205ENST00000488961 KRTAP6-3Q3LI67 103 aa2.46□□□□□ -2.02
BEST3-205ENST00000488961 MT1MQ8N339 61 aa2.46□□□□□ -2.02
BEST3-205ENST00000488961 KRTAP19-3Q7Z4W3 81 aa2.43□□□□□ -2.02
BEST3-205ENST00000488961 KRTAP5-9P26371 169 aa2.37□□□□□ -2.03
BEST3-205ENST00000488961 NEBP20929 6669 aa2.37□□□□□ -2.03
BEST3-205ENST00000488961 LCE3DQ9BYE3 92 aa2.34□□□□□ -2.03
BEST3-205ENST00000488961 PRM1P04553 51 aa2.3□□□□□ -2.04
BEST3-205ENST00000488961 SPRR2EP22531 72 aa2.3□□□□□ -2.04
BEST3-205ENST00000488961 SPRR2BP35325 72 aa2.3□□□□□ -2.04
BEST3-205ENST00000488961 SPRR2AP35326 72 aa2.3□□□□□ -2.04
BEST3-205ENST00000488961 KRTAP6-1Q3LI64 71 aa2.29□□□□□ -2.04
BEST3-205ENST00000488961 KRTAP5-11Q6L8G4 156 aa2.29□□□□□ -2.04
BEST3-205ENST00000488961 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
BEST3-205ENST00000488961 KRTAP5-7Q6L8G8 165 aa2.27□□□□□ -2.05
BEST3-205ENST00000488961 AHNAKQ09666 5890 aaKnown RBP2.26□□□□□ -2.05
BEST3-205ENST00000488961 SPRR2DP22532 72 aa2.22□□□□□ -2.05
BEST3-205ENST00000488961 KRTAP5-4Q6L8H1 288 aa2.22□□□□□ -2.05
BEST3-205ENST00000488961 KRTAP5-5Q701N2 237 aaPredicted RBP2.2□□□□□ -2.06
BEST3-205ENST00000488961 MT3P25713 68 aa2.18□□□□□ -2.06
BEST3-205ENST00000488961 KRTAP5-1Q6L8H4 278 aa2.13□□□□□ -2.07
BEST3-205ENST00000488961 MT1AP04731 61 aa2.11□□□□□ -2.07
BEST3-205ENST00000488961 KRTAP4-4Q9BYR3 166 aa2.11□□□□□ -2.07
BEST3-205ENST00000488961 KRTAP6-2Q3LI66 62 aa2.08□□□□□ -2.08
BEST3-205ENST00000488961 MT4P47944 62 aa2.07□□□□□ -2.08
BEST3-205ENST00000488961 KRTAP5-10Q6L8G5 202 aa2.03□□□□□ -2.08
BEST3-205ENST00000488961 AHNAK2Q8IVF2 5795 aa1.96□□□□□ -2.1
BEST3-205ENST00000488961 KRTAP5-2Q701N4 177 aa1.91□□□□□ -2.1
BEST3-205ENST00000488961 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
BEST3-205ENST00000488961 MUC5ACP98088 5654 aa1.84□□□□□ -2.11
BEST3-205ENST00000488961 KRTAP20-2Q3LI61 65 aa1.82□□□□□ -2.12
BEST3-205ENST00000488961 LCE1BQ5T7P3 118 aa1.78□□□□□ -2.12
BEST3-205ENST00000488961 LCE1CQ5T751 118 aa1.68□□□□□ -2.14
BEST3-205ENST00000488961 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
BEST3-205ENST00000488961 KRTAP21-2Q3LI59 83 aa1.41□□□□□ -2.18
BEST3-205ENST00000488961 PHGR1C9JFL3 82 aa1.09□□□□□ -2.24
BEST3-205ENST00000488961 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 79 ms