RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-215ENST00000488914 DNAH10Q8IVF4 4471 aa1.21□□□□□ -2.22
CTNNB1-215ENST00000488914 FRAS1Q86XX4 4008 aa1.21□□□□□ -2.22
CTNNB1-215ENST00000488914 DNAH9Q9NYC9 4486 aa1.21□□□□□ -2.22
CTNNB1-215ENST00000488914 HRNRQ86YZ3 2850 aaPredicted RBP1.21□□□□□ -2.22
CTNNB1-215ENST00000488914 VPS13BQ7Z7G8 4022 aa1.2□□□□□ -2.22
CTNNB1-215ENST00000488914 HMCN1Q96RW7 5635 aa1.19□□□□□ -2.22
CTNNB1-215ENST00000488914 FAT2Q9NYQ8 4349 aa1.18□□□□□ -2.22
CTNNB1-215ENST00000488914 HMCN2Q8NDA2 5059 aa1.18□□□□□ -2.22
CTNNB1-215ENST00000488914 KRTAP19-3Q7Z4W3 81 aa1.17□□□□□ -2.22
CTNNB1-215ENST00000488914 HUWE1Q7Z6Z7 4374 aaKnown RBP1.17□□□□□ -2.22
CTNNB1-215ENST00000488914 DNAH3Q8TD57 4116 aa1.17□□□□□ -2.22
CTNNB1-215ENST00000488914 DNAH6Q9C0G6 4158 aa1.16□□□□□ -2.22
CTNNB1-215ENST00000488914 APOBP04114 4563 aaKnown RBP1.16□□□□□ -2.22
CTNNB1-215ENST00000488914 STAB2Q8WWQ8 2551 aa1.15□□□□□ -2.22
CTNNB1-215ENST00000488914 DYNC1H1Q14204 4646 aaKnown RBP1.15□□□□□ -2.22
CTNNB1-215ENST00000488914 PKHD1P08F94 4074 aa1.15□□□□□ -2.23
CTNNB1-215ENST00000488914 HSPG2P98160 4391 aa1.15□□□□□ -2.23
CTNNB1-215ENST00000488914 LRP1BQ9NZR2 4599 aa1.14□□□□□ -2.23
CTNNB1-215ENST00000488914 PLECQ15149 4684 aaKnown RBP1.13□□□□□ -2.23
CTNNB1-215ENST00000488914 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
CTNNB1-215ENST00000488914 DNAH7Q8WXX0 4024 aa1.12□□□□□ -2.23
CTNNB1-215ENST00000488914 KRTAP5-10Q6L8G5 202 aa1.12□□□□□ -2.23
CTNNB1-215ENST00000488914 PKHD1L1Q86WI1 4243 aa1.12□□□□□ -2.23
CTNNB1-215ENST00000488914 STARD9Q9P2P6 4700 aa1.11□□□□□ -2.23
CTNNB1-215ENST00000488914 DNAH5Q8TE73 4624 aa1.11□□□□□ -2.23
CTNNB1-215ENST00000488914 FAT1Q14517 4588 aa1.11□□□□□ -2.23
CTNNB1-215ENST00000488914 LRP1Q07954 4544 aaKnown RBP1.1□□□□□ -2.23
CTNNB1-215ENST00000488914 SYNE2Q8WXH0 6885 aaKnown RBP1.09□□□□□ -2.24
CTNNB1-215ENST00000488914 GPR98Q8WXG9 6306 aa1.08□□□□□ -2.24
CTNNB1-215ENST00000488914 SSPOA2VEC9 5147 aa1.08□□□□□ -2.24
CTNNB1-215ENST00000488914 SMR3BP02814 79 aaPredicted RBP1.08□□□□□ -2.24
CTNNB1-215ENST00000488914 NEBP20929 6669 aa1.08□□□□□ -2.24
CTNNB1-215ENST00000488914 PKD1P98161 4303 aa1.08□□□□□ -2.24
CTNNB1-215ENST00000488914 FAT3Q8TDW7 4589 aa1.07□□□□□ -2.24
CTNNB1-215ENST00000488914 LRP2P98164 4655 aa1.07□□□□□ -2.24
CTNNB1-215ENST00000488914 MT1AP04731 61 aa1.06□□□□□ -2.24
CTNNB1-215ENST00000488914 SPRR2DP22532 72 aa1.05□□□□□ -2.24
CTNNB1-215ENST00000488914 KRTAP20-1Q3LI63 56 aa1.05□□□□□ -2.24
CTNNB1-215ENST00000488914 SPRR2BP35325 72 aa1.03□□□□□ -2.24
CTNNB1-215ENST00000488914 KRTAP19-5Q3LI72 72 aa1.03□□□□□ -2.24
CTNNB1-215ENST00000488914 MACF1Q9UPN3 7388 aaKnown RBP1.01□□□□□ -2.25
CTNNB1-215ENST00000488914 FLGP20930 4061 aaPredicted RBP1.01□□□□□ -2.25
CTNNB1-215ENST00000488914 KMT2DO14686 5537 aa0.99□□□□□ -2.25
CTNNB1-215ENST00000488914 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
CTNNB1-215ENST00000488914 USH2AO75445 5202 aa0.99□□□□□ -2.25
CTNNB1-215ENST00000488914 SPRR2AP35326 72 aa0.98□□□□□ -2.25
CTNNB1-215ENST00000488914 LPAP08519 4548 aa0.97□□□□□ -2.25
CTNNB1-215ENST00000488914 KRTAP6-2Q3LI66 62 aa0.96□□□□□ -2.26
CTNNB1-215ENST00000488914 MUC12Q9UKN1 5478 aa0.96□□□□□ -2.26
CTNNB1-215ENST00000488914 MUC17Q685J3 4493 aa0.94□□□□□ -2.26
CTNNB1-215ENST00000488914 SYNE1Q8NF91 8797 aaKnown RBP0.93□□□□□ -2.26
CTNNB1-215ENST00000488914 AHNAK2Q8IVF2 5795 aa0.92□□□□□ -2.26
CTNNB1-215ENST00000488914 SPRR2GQ9BYE4 73 aa0.92□□□□□ -2.26
CTNNB1-215ENST00000488914 SPRR2FQ96RM1 72 aa0.9□□□□□ -2.27
CTNNB1-215ENST00000488914 KRTAP19-2Q3LHN2 52 aa0.88□□□□□ -2.27
CTNNB1-215ENST00000488914 MT1HL1P0DM35 61 aa0.87□□□□□ -2.27
CTNNB1-215ENST00000488914 SPRR2EP22531 72 aa0.87□□□□□ -2.27
CTNNB1-215ENST00000488914 AHNAKQ09666 5890 aaKnown RBP0.86□□□□□ -2.27
CTNNB1-215ENST00000488914 KRTAP19-8Q3LI54 63 aa0.85□□□□□ -2.27
CTNNB1-215ENST00000488914 MDN1Q9NU22 5596 aa0.85□□□□□ -2.27
CTNNB1-215ENST00000488914 DSTQ03001 7570 aaKnown RBP0.85□□□□□ -2.27
CTNNB1-215ENST00000488914 MUC5BQ9HC84 5762 aaPredicted RBP0.83□□□□□ -2.28
CTNNB1-215ENST00000488914 MT1EP04732 61 aa0.81□□□□□ -2.28
CTNNB1-215ENST00000488914 MT1XP80297 61 aa0.79□□□□□ -2.28
CTNNB1-215ENST00000488914 MT1LQ93083 61 aa0.78□□□□□ -2.28
CTNNB1-215ENST00000488914 KRTAP19-6Q3LI70 58 aa0.77□□□□□ -2.29
CTNNB1-215ENST00000488914 MT1HP80294 61 aa0.76□□□□□ -2.29
CTNNB1-215ENST00000488914 MT1BP07438 61 aa0.75□□□□□ -2.29
CTNNB1-215ENST00000488914 MUC5ACP98088 5654 aa0.74□□□□□ -2.29
CTNNB1-215ENST00000488914 MT2AP02795 61 aa0.71□□□□□ -2.3
CTNNB1-215ENST00000488914 KRTAP19-7Q3SYF9 63 aa0.71□□□□□ -2.3
CTNNB1-215ENST00000488914 MT1FP04733 61 aa0.7□□□□□ -2.3
CTNNB1-215ENST00000488914 MT1GP13640 62 aa0.69□□□□□ -2.3
CTNNB1-215ENST00000488914 MT4P47944 62 aa0.66□□□□□ -2.3
CTNNB1-215ENST00000488914 MT1MQ8N339 61 aa0.65□□□□□ -2.31
CTNNB1-215ENST00000488914 KRTAP6-1Q3LI64 71 aa0.56□□□□□ -2.32
CTNNB1-215ENST00000488914 KRTAP20-2Q3LI61 65 aa0.53□□□□□ -2.32
CTNNB1-215ENST00000488914 PHGR1C9JFL3 82 aa0.5□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 68.3 ms