RNA–Protein interactions for RNA: ENST00000488883.5

SFI1-225, Transcript of SFI1 centrin binding protein, human

TSL 3

Gene SFI1, Length 567 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-225	ENST00000488883	LCE3A	Q5TA76	89 aa		5.74	□□□□□ -1.49
SFI1-225	ENST00000488883	MT1E	P04732	61 aa		5.7	□□□□□ -1.5
SFI1-225	ENST00000488883	KRTAP25-1	Q3LHN0	102 aa		5.7	□□□□□ -1.5
SFI1-225	ENST00000488883	KRTAP19-5	Q3LI72	72 aa		5.7	□□□□□ -1.5
SFI1-225	ENST00000488883	ROMO1	P60602	79 aa		5.62	□□□□□ -1.51
SFI1-225	ENST00000488883	SPRR2D	P22532	72 aa		5.61	□□□□□ -1.51
SFI1-225	ENST00000488883	KRTAP19-3	Q7Z4W3	81 aa		5.55	□□□□□ -1.52
SFI1-225	ENST00000488883	BRK1	Q8WUW1	75 aa		5.55	□□□□□ -1.52
SFI1-225	ENST00000488883	LCE3B	Q5TA77	95 aa		5.54	□□□□□ -1.52
SFI1-225	ENST00000488883	KRTAP23-1	A1A580	65 aa		5.53	□□□□□ -1.52
SFI1-225	ENST00000488883	LCE5A	Q5TCM9	118 aa		5.53	□□□□□ -1.52
SFI1-225	ENST00000488883	KRTAP12-3	P60328	96 aa		5.51	□□□□□ -1.53
SFI1-225	ENST00000488883	MT1L	Q93083	61 aa		5.5	□□□□□ -1.53
SFI1-225	ENST00000488883	DST	Q03001	7570 aa	Known RBP	5.46	□□□□□ -1.54
SFI1-225	ENST00000488883	MT1G	P13640	62 aa		5.45	□□□□□ -1.54
SFI1-225	ENST00000488883	KRTAP4-9	Q9BYQ8	210 aa		5.44	□□□□□ -1.54
SFI1-225	ENST00000488883	MT1M	Q8N339	61 aa		5.38	□□□□□ -1.55
SFI1-225	ENST00000488883	PP632	Q6XCG6	107 aa		5.36	□□□□□ -1.55
SFI1-225	ENST00000488883	KRTAP15-1	Q3LI76	137 aa		5.28	□□□□□ -1.56
SFI1-225	ENST00000488883	KRTAP4-3	Q9BYR4	195 aa		5.28	□□□□□ -1.56
SFI1-225	ENST00000488883	KRTAP4-7	Q9BYR0	210 aa		5.27	□□□□□ -1.57
SFI1-225	ENST00000488883	KRTAP5-10	Q6L8G5	202 aa		5.26	□□□□□ -1.57
SFI1-225	ENST00000488883	PMAIP1	Q13794	54 aa		5.25	□□□□□ -1.57
SFI1-225	ENST00000488883	KRTAP9-9	Q9BYP9	154 aa		5.22	□□□□□ -1.57
SFI1-225	ENST00000488883	KRTAP9-4	Q9BYQ2	154 aa		5.22	□□□□□ -1.57
SFI1-225	ENST00000488883	AHNAK2	Q8IVF2	5795 aa		5.21	□□□□□ -1.57
SFI1-225	ENST00000488883	KRTAP19-4	Q3LI73	84 aa		5.19	□□□□□ -1.58
SFI1-225	ENST00000488883	LCE1D	Q5T752	114 aa		5.19	□□□□□ -1.58
SFI1-225	ENST00000488883	PRO0628	Q9UI54	55 aa		5.18	□□□□□ -1.58
SFI1-225	ENST00000488883	HMCN1	Q96RW7	5635 aa		5.16	□□□□□ -1.58
SFI1-225	ENST00000488883	KRTAP5-7	Q6L8G8	165 aa		5.15	□□□□□ -1.59
SFI1-225	ENST00000488883	SVIP	Q8NHG7	77 aa		5.12	□□□□□ -1.59
SFI1-225	ENST00000488883	KRTAP4-12	Q9BQ66	201 aa		5.12	□□□□□ -1.59
SFI1-225	ENST00000488883	LCE3C	Q5T5A8	94 aa		5.11	□□□□□ -1.59
SFI1-225	ENST00000488883	SPRR5	A0A1B0GTR4	108 aa		5.04	□□□□□ -1.6
SFI1-225	ENST00000488883	PRAC1	Q96KF2	57 aa		5.03	□□□□□ -1.6
SFI1-225	ENST00000488883	MT4	P47944	62 aa		5.01	□□□□□ -1.61
SFI1-225	ENST00000488883	KRTAP5-4	Q6L8H1	288 aa		4.94	□□□□□ -1.62
SFI1-225	ENST00000488883	KRTAP5-3	Q6L8H2	238 aa		4.93	□□□□□ -1.62
SFI1-225	ENST00000488883	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.93	□□□□□ -1.62
SFI1-225	ENST00000488883	LCE4A	Q5TA78	99 aa		4.91	□□□□□ -1.62
SFI1-225	ENST00000488883	KRTAP4-2	Q9BYR5	136 aa		4.91	□□□□□ -1.62
SFI1-225	ENST00000488883	KRTAP9-6	A8MVA2	160 aa		4.88	□□□□□ -1.63
SFI1-225	ENST00000488883	KTN1-AS1	Q86SY8	53 aa		4.86	□□□□□ -1.63
SFI1-225	ENST00000488883	SYNE1	Q8NF91	8797 aa	Known RBP	4.82	□□□□□ -1.64
SFI1-225	ENST00000488883	MT1A	P04731	61 aa		4.67	□□□□□ -1.66
SFI1-225	ENST00000488883	KRTAP6-1	Q3LI64	71 aa		4.64	□□□□□ -1.67
SFI1-225	ENST00000488883	KRTAP12-4	P60329	112 aa		4.63	□□□□□ -1.67
SFI1-225	ENST00000488883	KRTAP20-2	Q3LI61	65 aa		4.62	□□□□□ -1.67
SFI1-225	ENST00000488883	KRTAP4-11	Q9BYQ6	195 aa		4.62	□□□□□ -1.67
SFI1-225	ENST00000488883	AHNAK	Q09666	5890 aa	Known RBP	4.51	□□□□□ -1.69
SFI1-225	ENST00000488883	MUC5AC	P98088	5654 aa		4.45	□□□□□ -1.7
SFI1-225	ENST00000488883	KRTAP5-2	Q701N4	177 aa		4.4	□□□□□ -1.71
SFI1-225	ENST00000488883	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.38	□□□□□ -1.71
SFI1-225	ENST00000488883	KRTAP6-2	Q3LI66	62 aa		4.35	□□□□□ -1.71
SFI1-225	ENST00000488883		A0A0A0MQY5	61 aa		4.34	□□□□□ -1.71
SFI1-225	ENST00000488883	KRTAP5-8	O75690	187 aa		4.27	□□□□□ -1.73
SFI1-225	ENST00000488883	MT3	P25713	68 aa		4.24	□□□□□ -1.73
SFI1-225	ENST00000488883	LUZP6	Q538Z0	58 aa		4.08	□□□□□ -1.76
SFI1-225	ENST00000488883	OBSCN	Q5VST9	7968 aa		4.02	□□□□□ -1.77
SFI1-225	ENST00000488883	KRTAP5-1	Q6L8H4	278 aa		3.88	□□□□□ -1.79
SFI1-225	ENST00000488883	LCE1E	Q5T753	118 aa		3.81	□□□□□ -1.8
SFI1-225	ENST00000488883	LCE3D	Q9BYE3	92 aa		3.74	□□□□□ -1.81
SFI1-225	ENST00000488883	NDUFAF8	A1L188	74 aa		3.68	□□□□□ -1.82
SFI1-225	ENST00000488883	LCE3E	Q5T5B0	92 aa		3.59	□□□□□ -1.83
SFI1-225	ENST00000488883	LCE1B	Q5T7P3	118 aa		3.55	□□□□□ -1.84
SFI1-225	ENST00000488883	LCE1C	Q5T751	118 aa		3.54	□□□□□ -1.84
SFI1-225	ENST00000488883	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.46	□□□□□ -1.86
SFI1-225	ENST00000488883	KRTAP5-11	Q6L8G4	156 aa		3.17	□□□□□ -1.9
SFI1-225	ENST00000488883	LCE1F	Q5T754	118 aa		3.11	□□□□□ -1.91
SFI1-225	ENST00000488883	PHGR1	C9JFL3	82 aa		3.08	□□□□□ -1.92
SFI1-225	ENST00000488883	KRTAP21-2	Q3LI59	83 aa		3.07	□□□□□ -1.92
SFI1-225	ENST00000488883	INE1	O15225	51 aa		2.99	□□□□□ -1.93
SFI1-225	ENST00000488883	PRM1	P04553	51 aa		2.91	□□□□□ -1.94
SFI1-225	ENST00000488883	KRTAP4-4	Q9BYR3	166 aa		2.88	□□□□□ -1.95
SFI1-225	ENST00000488883	MUC19	Q7Z5P9	8384 aa		2.5	□□□□□ -2.01
SFI1-225	ENST00000488883	KRTAP21-1	Q3LI58	79 aa		2.32	□□□□□ -2.04
SFI1-225	ENST00000488883	MUC16	Q8WXI7	14507 aa		1.78	□□□□□ -2.12

Retrieved 78 of 20,778 RNA–protein pairs in 174.3 ms